Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:0258:0228
Extra
PDB:
ATOM 1 O3' G A 257 79.021 104.280 0.138 1.00 58.82 O
ATOM 2 P U A 258 77.580 104.233 0.844 1.00 60.42 P
ATOM 3 OP1 U A 258 76.920 102.980 0.405 1.00 60.44 O
ATOM 4 OP2 U A 258 76.880 105.535 0.662 1.00 58.03 O
ATOM 5 O5' U A 258 77.947 104.062 2.380 1.00 61.27 O
ATOM 6 C5' U A 258 78.725 102.937 2.818 1.00 63.22 C
ATOM 7 C4' U A 258 78.995 103.037 4.297 1.00 64.57 C
ATOM 8 O4' U A 258 80.064 103.998 4.545 1.00 63.36 O
ATOM 9 C3' U A 258 77.802 103.500 5.130 1.00 65.05 C
ATOM 10 O3' U A 258 77.798 102.818 6.374 1.00 68.75 O
ATOM 11 C2' U A 258 78.113 104.978 5.350 1.00 63.64 C
ATOM 12 O2' U A 258 77.488 105.537 6.489 1.00 64.25 O
ATOM 13 C1' U A 258 79.629 104.917 5.520 1.00 61.58 C
ATOM 14 N1 U A 258 80.391 106.172 5.402 1.00 57.74 N
ATOM 15 C2 U A 258 81.699 106.172 5.871 1.00 55.45 C
ATOM 16 O2 U A 258 82.261 105.172 6.279 1.00 52.63 O
ATOM 17 N3 U A 258 82.325 107.389 5.841 1.00 54.80 N
ATOM 18 C4 U A 258 81.801 108.581 5.389 1.00 55.21 C
ATOM 19 O4 U A 258 82.440 109.622 5.562 1.00 55.00 O
ATOM 20 C5 U A 258 80.471 108.489 4.869 1.00 55.04 C
ATOM 21 C6 U A 258 79.829 107.318 4.889 1.00 55.84 C
ATOM 22 P C A 259 76.409 102.322 6.997 1.00 73.04 P
ATOM 23 OP1 C A 259 75.378 103.367 6.754 1.00 72.91 O
ATOM 24 OP2 C A 259 76.680 101.862 8.380 1.00 73.49 O
ATOM 25 O5' C A 259 76.009 101.065 6.109 1.00 77.67 O
TER
ATOM 1 O3' C B 227 76.965 112.985 4.913 1.00 56.49 O
ATOM 2 P C B 228 78.414 112.680 4.292 1.00 56.11 P
ATOM 3 OP1 C B 228 78.657 113.730 3.279 1.00 57.78 O
ATOM 4 OP2 C B 228 78.507 111.256 3.913 1.00 56.03 O
ATOM 5 O5' C B 228 79.392 112.931 5.519 1.00 54.75 O
ATOM 6 C5' C B 228 80.774 112.590 5.451 1.00 52.52 C
ATOM 7 C4' C B 228 81.419 112.840 6.788 1.00 52.01 C
ATOM 8 O4' C B 228 80.775 112.029 7.801 1.00 51.17 O
ATOM 9 C3' C B 228 82.886 112.473 6.871 1.00 52.14 C
ATOM 10 O3' C B 228 83.644 113.580 6.400 1.00 52.65 O
ATOM 11 C2' C B 228 83.086 112.234 8.367 1.00 51.91 C
ATOM 12 O2' C B 228 83.305 113.422 9.106 1.00 51.69 O
ATOM 13 C1' C B 228 81.728 111.645 8.780 1.00 50.67 C
ATOM 14 N1 C B 228 81.655 110.177 8.968 1.00 49.12 N
ATOM 15 C2 C B 228 82.668 109.514 9.695 1.00 49.44 C
ATOM 16 O2 C B 228 83.592 110.174 10.196 1.00 50.08 O
ATOM 17 N3 C B 228 82.606 108.171 9.834 1.00 49.15 N
ATOM 18 C4 C B 228 81.595 107.489 9.294 1.00 49.41 C
ATOM 19 N4 C B 228 81.593 106.163 9.434 1.00 49.63 N
ATOM 20 C5 C B 228 80.543 108.136 8.578 1.00 49.04 C
ATOM 21 C6 C B 228 80.613 109.464 8.440 1.00 48.77 C
ATOM 22 P A B 229 84.991 113.340 5.567 1.00 54.76 P
ATOM 23 OP1 A B 229 85.662 114.666 5.501 1.00 54.16 O
ATOM 24 OP2 A B 229 84.673 112.613 4.307 1.00 54.84 O
ATOM 25 O5' A B 229 85.859 112.389 6.499 1.00 53.19 O
TER
ATOM 2 P U A 258 77.580 104.233 0.844 1.00 60.42 P
ATOM 3 OP1 U A 258 76.920 102.980 0.405 1.00 60.44 O
ATOM 4 OP2 U A 258 76.880 105.535 0.662 1.00 58.03 O
ATOM 5 O5' U A 258 77.947 104.062 2.380 1.00 61.27 O
ATOM 6 C5' U A 258 78.725 102.937 2.818 1.00 63.22 C
ATOM 7 C4' U A 258 78.995 103.037 4.297 1.00 64.57 C
ATOM 8 O4' U A 258 80.064 103.998 4.545 1.00 63.36 O
ATOM 9 C3' U A 258 77.802 103.500 5.130 1.00 65.05 C
ATOM 10 O3' U A 258 77.798 102.818 6.374 1.00 68.75 O
ATOM 11 C2' U A 258 78.113 104.978 5.350 1.00 63.64 C
ATOM 12 O2' U A 258 77.488 105.537 6.489 1.00 64.25 O
ATOM 13 C1' U A 258 79.629 104.917 5.520 1.00 61.58 C
ATOM 14 N1 U A 258 80.391 106.172 5.402 1.00 57.74 N
ATOM 15 C2 U A 258 81.699 106.172 5.871 1.00 55.45 C
ATOM 16 O2 U A 258 82.261 105.172 6.279 1.00 52.63 O
ATOM 17 N3 U A 258 82.325 107.389 5.841 1.00 54.80 N
ATOM 18 C4 U A 258 81.801 108.581 5.389 1.00 55.21 C
ATOM 19 O4 U A 258 82.440 109.622 5.562 1.00 55.00 O
ATOM 20 C5 U A 258 80.471 108.489 4.869 1.00 55.04 C
ATOM 21 C6 U A 258 79.829 107.318 4.889 1.00 55.84 C
ATOM 22 P C A 259 76.409 102.322 6.997 1.00 73.04 P
ATOM 23 OP1 C A 259 75.378 103.367 6.754 1.00 72.91 O
ATOM 24 OP2 C A 259 76.680 101.862 8.380 1.00 73.49 O
ATOM 25 O5' C A 259 76.009 101.065 6.109 1.00 77.67 O
TER
ATOM 1 O3' C B 227 76.965 112.985 4.913 1.00 56.49 O
ATOM 2 P C B 228 78.414 112.680 4.292 1.00 56.11 P
ATOM 3 OP1 C B 228 78.657 113.730 3.279 1.00 57.78 O
ATOM 4 OP2 C B 228 78.507 111.256 3.913 1.00 56.03 O
ATOM 5 O5' C B 228 79.392 112.931 5.519 1.00 54.75 O
ATOM 6 C5' C B 228 80.774 112.590 5.451 1.00 52.52 C
ATOM 7 C4' C B 228 81.419 112.840 6.788 1.00 52.01 C
ATOM 8 O4' C B 228 80.775 112.029 7.801 1.00 51.17 O
ATOM 9 C3' C B 228 82.886 112.473 6.871 1.00 52.14 C
ATOM 10 O3' C B 228 83.644 113.580 6.400 1.00 52.65 O
ATOM 11 C2' C B 228 83.086 112.234 8.367 1.00 51.91 C
ATOM 12 O2' C B 228 83.305 113.422 9.106 1.00 51.69 O
ATOM 13 C1' C B 228 81.728 111.645 8.780 1.00 50.67 C
ATOM 14 N1 C B 228 81.655 110.177 8.968 1.00 49.12 N
ATOM 15 C2 C B 228 82.668 109.514 9.695 1.00 49.44 C
ATOM 16 O2 C B 228 83.592 110.174 10.196 1.00 50.08 O
ATOM 17 N3 C B 228 82.606 108.171 9.834 1.00 49.15 N
ATOM 18 C4 C B 228 81.595 107.489 9.294 1.00 49.41 C
ATOM 19 N4 C B 228 81.593 106.163 9.434 1.00 49.63 N
ATOM 20 C5 C B 228 80.543 108.136 8.578 1.00 49.04 C
ATOM 21 C6 C B 228 80.613 109.464 8.440 1.00 48.77 C
ATOM 22 P A B 229 84.991 113.340 5.567 1.00 54.76 P
ATOM 23 OP1 A B 229 85.662 114.666 5.501 1.00 54.16 O
ATOM 24 OP2 A B 229 84.673 112.613 4.307 1.00 54.84 O
ATOM 25 O5' A B 229 85.859 112.389 6.499 1.00 53.19 O
TER
Atoms:
C4: (81.801,108.581,5.389)
N3: (82.325,107.389,5.841)
OP1: (76.920,102.980,0.405)
OP2: (76.880,105.535,0.662)
C2: (81.699,106.172,5.871)
C1': (79.629,104.917,5.520)
C3': (77.802,103.500,5.130)
O5': (77.947,104.062,2.380)
O4': (80.064,103.998,4.545)
C5': (78.725,102.937,2.818)
P: (77.580,104.233,0.844)
C4': (78.995,103.037,4.297)
C2': (78.113,104.978,5.350)
O2': (77.488,105.537,6.489)
N1: (80.391,106.172,5.402)
O4: (82.440,109.622,5.562)
O2: (82.261,105.172,6.279)
C6: (79.829,107.318,4.889)
C5: (80.471,108.489,4.869)
O3': (77.798,102.818,6.374)
N3: (82.325,107.389,5.841)
OP1: (76.920,102.980,0.405)
OP2: (76.880,105.535,0.662)
C2: (81.699,106.172,5.871)
C1': (79.629,104.917,5.520)
C3': (77.802,103.500,5.130)
O5': (77.947,104.062,2.380)
O4': (80.064,103.998,4.545)
C5': (78.725,102.937,2.818)
P: (77.580,104.233,0.844)
C4': (78.995,103.037,4.297)
C2': (78.113,104.978,5.350)
O2': (77.488,105.537,6.489)
N1: (80.391,106.172,5.402)
O4: (82.440,109.622,5.562)
O2: (82.261,105.172,6.279)
C6: (79.829,107.318,4.889)
C5: (80.471,108.489,4.869)
O3': (77.798,102.818,6.374)
C2: (82.668,109.514,9.695)
OP1: (78.657,113.730,3.279)
OP2: (78.507,111.256,3.913)
C4: (81.595,107.489,9.294)
O5': (79.392,112.931,5.519)
C3': (82.886,112.473,6.871)
C1': (81.728,111.645,8.780)
O4': (80.775,112.029,7.801)
C5': (80.774,112.590,5.451)
P: (78.414,112.680,4.292)
O2: (83.592,110.174,10.196)
C4': (81.419,112.840,6.788)
C2': (83.086,112.234,8.367)
O2': (83.305,113.422,9.106)
N1: (81.655,110.177,8.968)
N3: (82.606,108.171,9.834)
N4: (81.593,106.163,9.434)
C6: (80.613,109.464,8.440)
C5: (80.543,108.136,8.578)
O3': (83.644,113.580,6.400)
OP1: (78.657,113.730,3.279)
OP2: (78.507,111.256,3.913)
C4: (81.595,107.489,9.294)
O5': (79.392,112.931,5.519)
C3': (82.886,112.473,6.871)
C1': (81.728,111.645,8.780)
O4': (80.775,112.029,7.801)
C5': (80.774,112.590,5.451)
P: (78.414,112.680,4.292)
O2: (83.592,110.174,10.196)
C4': (81.419,112.840,6.788)
C2': (83.086,112.234,8.367)
O2': (83.305,113.422,9.106)
N1: (81.655,110.177,8.968)
N3: (82.606,108.171,9.834)
N4: (81.593,106.163,9.434)
C6: (80.613,109.464,8.440)
C5: (80.543,108.136,8.578)
O3': (83.644,113.580,6.400)
Image (generated by PyMOL):