Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A8:B13
Extra
PDB:
ATOM 1 O3' U A 7 19.966 -18.129 -12.438 1.00 51.72 O
ATOM 2 P A A 8 20.165 -16.948 -11.366 1.00 55.29 P
ATOM 3 OP1 A A 8 21.465 -17.183 -10.694 1.00 52.35 O
ATOM 4 OP2 A A 8 18.935 -16.896 -10.539 1.00 47.84 O
ATOM 5 O5' A A 8 20.254 -15.652 -12.285 1.00 53.59 O
ATOM 6 C5' A A 8 19.322 -15.445 -13.337 1.00 48.63 C
ATOM 7 C4' A A 8 19.852 -14.483 -14.373 1.00 49.41 C
ATOM 8 O4' A A 8 21.160 -14.917 -14.821 1.00 50.60 O
ATOM 9 C3' A A 8 19.036 -14.366 -15.655 1.00 50.57 C
ATOM 10 O3' A A 8 17.932 -13.484 -15.528 1.00 61.39 O
ATOM 11 C2' A A 8 20.069 -13.898 -16.677 1.00 47.45 C
ATOM 12 O2' A A 8 20.248 -12.491 -16.600 1.00 47.53 O
ATOM 13 C1' A A 8 21.346 -14.578 -16.177 1.00 50.12 C
ATOM 14 N9 A A 8 21.670 -15.805 -16.934 1.00 50.56 N
ATOM 15 C8 A A 8 22.928 -16.226 -17.287 1.00 49.47 C
ATOM 16 N7 A A 8 22.952 -17.354 -17.949 1.00 49.25 N
ATOM 17 C5 A A 8 21.614 -17.710 -18.040 1.00 47.33 C
ATOM 18 C6 A A 8 20.972 -18.814 -18.629 1.00 41.08 C
ATOM 19 N6 A A 8 21.616 -19.797 -19.263 1.00 38.79 N
ATOM 20 N1 A A 8 19.627 -18.875 -18.546 1.00 46.36 N
ATOM 21 C2 A A 8 18.981 -17.889 -17.910 1.00 47.05 C
ATOM 22 N3 A A 8 19.472 -16.803 -17.318 1.00 48.23 N
ATOM 23 C4 A A 8 20.812 -16.768 -17.416 1.00 47.68 C
ATOM 24 P A A 9 16.481 -14.036 -15.101 1.00 56.57 P
ATOM 25 OP1 A A 9 15.668 -12.862 -14.706 1.00 40.22 O
ATOM 26 OP2 A A 9 16.695 -15.118 -14.111 1.00 60.97 O
ATOM 27 O5' A A 9 15.917 -14.651 -16.458 1.00 51.90 O
TER
ATOM 1 O3' G B 12 24.912 -13.463 -17.791 1.00 57.33 O
ATOM 2 P C B 13 25.121 -12.469 -16.544 1.00 54.95 P
ATOM 3 OP1 C B 13 24.045 -12.762 -15.568 1.00 64.34 O
ATOM 4 OP2 C B 13 25.229 -11.097 -17.092 1.00 59.16 O
ATOM 5 O5' C B 13 26.527 -12.930 -15.954 1.00 55.27 O
ATOM 6 C5' C B 13 26.643 -14.130 -15.205 1.00 61.65 C
ATOM 7 C4' C B 13 28.070 -14.393 -14.789 1.00 68.49 C
ATOM 8 O4' C B 13 28.934 -14.408 -15.955 1.00 68.63 O
ATOM 9 C3' C B 13 28.712 -13.353 -13.885 1.00 66.44 C
ATOM 10 O3' C B 13 28.314 -13.464 -12.530 1.00 69.52 O
ATOM 11 C2' C B 13 30.196 -13.606 -14.108 1.00 71.47 C
ATOM 12 O2' C B 13 30.620 -14.757 -13.392 1.00 73.09 O
ATOM 13 C1' C B 13 30.219 -13.931 -15.602 1.00 67.92 C
ATOM 14 N1 C B 13 30.529 -12.739 -16.421 1.00 62.02 N
ATOM 15 C2 C B 13 31.871 -12.372 -16.553 1.00 65.53 C
ATOM 16 O2 C B 13 32.735 -13.058 -15.986 1.00 67.05 O
ATOM 17 N3 C B 13 32.196 -11.284 -17.289 1.00 62.35 N
ATOM 18 C4 C B 13 31.236 -10.572 -17.881 1.00 60.67 C
ATOM 19 N4 C B 13 31.603 -9.508 -18.599 1.00 60.39 N
ATOM 20 C5 C B 13 29.859 -10.923 -17.763 1.00 61.01 C
ATOM 21 C6 C B 13 29.550 -12.002 -17.030 1.00 62.46 C
ATOM 22 P G B 14 28.452 -12.199 -11.545 1.00 79.55 P
ATOM 23 OP1 G B 14 27.897 -12.606 -10.231 1.00 77.55 O
ATOM 24 OP2 G B 14 27.852 -11.035 -12.241 1.00 79.81 O
ATOM 25 O5' G B 14 30.029 -12.008 -11.433 1.00 70.44 O
TER
ATOM 2 P A A 8 20.165 -16.948 -11.366 1.00 55.29 P
ATOM 3 OP1 A A 8 21.465 -17.183 -10.694 1.00 52.35 O
ATOM 4 OP2 A A 8 18.935 -16.896 -10.539 1.00 47.84 O
ATOM 5 O5' A A 8 20.254 -15.652 -12.285 1.00 53.59 O
ATOM 6 C5' A A 8 19.322 -15.445 -13.337 1.00 48.63 C
ATOM 7 C4' A A 8 19.852 -14.483 -14.373 1.00 49.41 C
ATOM 8 O4' A A 8 21.160 -14.917 -14.821 1.00 50.60 O
ATOM 9 C3' A A 8 19.036 -14.366 -15.655 1.00 50.57 C
ATOM 10 O3' A A 8 17.932 -13.484 -15.528 1.00 61.39 O
ATOM 11 C2' A A 8 20.069 -13.898 -16.677 1.00 47.45 C
ATOM 12 O2' A A 8 20.248 -12.491 -16.600 1.00 47.53 O
ATOM 13 C1' A A 8 21.346 -14.578 -16.177 1.00 50.12 C
ATOM 14 N9 A A 8 21.670 -15.805 -16.934 1.00 50.56 N
ATOM 15 C8 A A 8 22.928 -16.226 -17.287 1.00 49.47 C
ATOM 16 N7 A A 8 22.952 -17.354 -17.949 1.00 49.25 N
ATOM 17 C5 A A 8 21.614 -17.710 -18.040 1.00 47.33 C
ATOM 18 C6 A A 8 20.972 -18.814 -18.629 1.00 41.08 C
ATOM 19 N6 A A 8 21.616 -19.797 -19.263 1.00 38.79 N
ATOM 20 N1 A A 8 19.627 -18.875 -18.546 1.00 46.36 N
ATOM 21 C2 A A 8 18.981 -17.889 -17.910 1.00 47.05 C
ATOM 22 N3 A A 8 19.472 -16.803 -17.318 1.00 48.23 N
ATOM 23 C4 A A 8 20.812 -16.768 -17.416 1.00 47.68 C
ATOM 24 P A A 9 16.481 -14.036 -15.101 1.00 56.57 P
ATOM 25 OP1 A A 9 15.668 -12.862 -14.706 1.00 40.22 O
ATOM 26 OP2 A A 9 16.695 -15.118 -14.111 1.00 60.97 O
ATOM 27 O5' A A 9 15.917 -14.651 -16.458 1.00 51.90 O
TER
ATOM 1 O3' G B 12 24.912 -13.463 -17.791 1.00 57.33 O
ATOM 2 P C B 13 25.121 -12.469 -16.544 1.00 54.95 P
ATOM 3 OP1 C B 13 24.045 -12.762 -15.568 1.00 64.34 O
ATOM 4 OP2 C B 13 25.229 -11.097 -17.092 1.00 59.16 O
ATOM 5 O5' C B 13 26.527 -12.930 -15.954 1.00 55.27 O
ATOM 6 C5' C B 13 26.643 -14.130 -15.205 1.00 61.65 C
ATOM 7 C4' C B 13 28.070 -14.393 -14.789 1.00 68.49 C
ATOM 8 O4' C B 13 28.934 -14.408 -15.955 1.00 68.63 O
ATOM 9 C3' C B 13 28.712 -13.353 -13.885 1.00 66.44 C
ATOM 10 O3' C B 13 28.314 -13.464 -12.530 1.00 69.52 O
ATOM 11 C2' C B 13 30.196 -13.606 -14.108 1.00 71.47 C
ATOM 12 O2' C B 13 30.620 -14.757 -13.392 1.00 73.09 O
ATOM 13 C1' C B 13 30.219 -13.931 -15.602 1.00 67.92 C
ATOM 14 N1 C B 13 30.529 -12.739 -16.421 1.00 62.02 N
ATOM 15 C2 C B 13 31.871 -12.372 -16.553 1.00 65.53 C
ATOM 16 O2 C B 13 32.735 -13.058 -15.986 1.00 67.05 O
ATOM 17 N3 C B 13 32.196 -11.284 -17.289 1.00 62.35 N
ATOM 18 C4 C B 13 31.236 -10.572 -17.881 1.00 60.67 C
ATOM 19 N4 C B 13 31.603 -9.508 -18.599 1.00 60.39 N
ATOM 20 C5 C B 13 29.859 -10.923 -17.763 1.00 61.01 C
ATOM 21 C6 C B 13 29.550 -12.002 -17.030 1.00 62.46 C
ATOM 22 P G B 14 28.452 -12.199 -11.545 1.00 79.55 P
ATOM 23 OP1 G B 14 27.897 -12.606 -10.231 1.00 77.55 O
ATOM 24 OP2 G B 14 27.852 -11.035 -12.241 1.00 79.81 O
ATOM 25 O5' G B 14 30.029 -12.008 -11.433 1.00 70.44 O
TER
Atoms:
OP1: (21.465,-17.183,-10.694)
OP2: (18.935,-16.896,-10.539)
C3': (19.036,-14.366,-15.655)
C1': (21.346,-14.578,-16.177)
C5': (19.322,-15.445,-13.337)
O4': (21.160,-14.917,-14.821)
C8: (22.928,-16.226,-17.287)
O2': (20.248,-12.491,-16.600)
C6: (20.972,-18.814,-18.629)
C5: (21.614,-17.710,-18.040)
C4: (20.812,-16.768,-17.416)
P: (20.165,-16.948,-11.366)
C4': (19.852,-14.483,-14.373)
C2': (20.069,-13.898,-16.677)
C2: (18.981,-17.889,-17.910)
N1: (19.627,-18.875,-18.546)
N3: (19.472,-16.803,-17.318)
N6: (21.616,-19.797,-19.263)
N7: (22.952,-17.354,-17.949)
N9: (21.670,-15.805,-16.934)
O5': (20.254,-15.652,-12.285)
O3': (17.932,-13.484,-15.528)
OP2: (18.935,-16.896,-10.539)
C3': (19.036,-14.366,-15.655)
C1': (21.346,-14.578,-16.177)
C5': (19.322,-15.445,-13.337)
O4': (21.160,-14.917,-14.821)
C8: (22.928,-16.226,-17.287)
O2': (20.248,-12.491,-16.600)
C6: (20.972,-18.814,-18.629)
C5: (21.614,-17.710,-18.040)
C4: (20.812,-16.768,-17.416)
P: (20.165,-16.948,-11.366)
C4': (19.852,-14.483,-14.373)
C2': (20.069,-13.898,-16.677)
C2: (18.981,-17.889,-17.910)
N1: (19.627,-18.875,-18.546)
N3: (19.472,-16.803,-17.318)
N6: (21.616,-19.797,-19.263)
N7: (22.952,-17.354,-17.949)
N9: (21.670,-15.805,-16.934)
O5': (20.254,-15.652,-12.285)
O3': (17.932,-13.484,-15.528)
C2: (31.871,-12.372,-16.553)
OP1: (24.045,-12.762,-15.568)
OP2: (25.229,-11.097,-17.092)
C4: (31.236,-10.572,-17.881)
O5': (26.527,-12.930,-15.954)
C3': (28.712,-13.353,-13.885)
C1': (30.219,-13.931,-15.602)
O4': (28.934,-14.408,-15.955)
C5': (26.643,-14.130,-15.205)
P: (25.121,-12.469,-16.544)
O2: (32.735,-13.058,-15.986)
C4': (28.070,-14.393,-14.789)
C2': (30.196,-13.606,-14.108)
O2': (30.620,-14.757,-13.392)
N1: (30.529,-12.739,-16.421)
N3: (32.196,-11.284,-17.289)
N4: (31.603,-9.508,-18.599)
C6: (29.550,-12.002,-17.030)
C5: (29.859,-10.923,-17.763)
O3': (28.314,-13.464,-12.530)
OP1: (24.045,-12.762,-15.568)
OP2: (25.229,-11.097,-17.092)
C4: (31.236,-10.572,-17.881)
O5': (26.527,-12.930,-15.954)
C3': (28.712,-13.353,-13.885)
C1': (30.219,-13.931,-15.602)
O4': (28.934,-14.408,-15.955)
C5': (26.643,-14.130,-15.205)
P: (25.121,-12.469,-16.544)
O2: (32.735,-13.058,-15.986)
C4': (28.070,-14.393,-14.789)
C2': (30.196,-13.606,-14.108)
O2': (30.620,-14.757,-13.392)
N1: (30.529,-12.739,-16.421)
N3: (32.196,-11.284,-17.289)
N4: (31.603,-9.508,-18.599)
C6: (29.550,-12.002,-17.030)
C5: (29.859,-10.923,-17.763)
O3': (28.314,-13.464,-12.530)
Image (generated by PyMOL):