Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2S:E3:E2
Extra
PDB:
ATOM 1 O3' C A 2 27.511 13.376 -13.563 1.00 14.63 O
ATOM 2 P U A 3 28.511 12.631 -12.560 1.00 15.66 P
ATOM 3 OP1 U A 3 29.727 12.376 -13.345 1.00 16.13 O
ATOM 4 OP2 U A 3 27.711 11.557 -11.932 1.00 20.06 O
ATOM 5 O5' U A 3 28.883 13.627 -11.356 1.00 15.64 O
ATOM 6 C5' U A 3 29.716 14.740 -11.568 1.00 15.80 C
ATOM 7 C4' U A 3 30.122 15.307 -10.229 1.00 15.34 C
ATOM 8 O4' U A 3 28.934 15.664 -9.489 1.00 13.63 O
ATOM 9 C3' U A 3 30.879 14.313 -9.360 1.00 15.19 C
ATOM 10 O3' U A 3 31.825 14.993 -8.579 1.00 16.23 O
ATOM 11 C2' U A 3 29.806 13.720 -8.474 1.00 15.77 C
ATOM 12 O2' U A 3 30.352 13.264 -7.263 1.00 15.39 O
ATOM 13 C1' U A 3 28.943 14.953 -8.267 1.00 16.50 C
ATOM 14 N1 U A 3 27.523 14.702 -7.931 1.00 16.35 N
ATOM 15 C2 U A 3 27.036 15.263 -6.775 1.00 17.20 C
ATOM 16 O2 U A 3 27.747 15.931 -6.031 1.00 17.32 O
ATOM 17 N3 U A 3 25.707 15.000 -6.557 1.00 17.30 N
ATOM 18 C4 U A 3 24.859 14.246 -7.361 1.00 17.55 C
ATOM 19 O4 U A 3 23.681 14.089 -7.038 1.00 19.25 O
ATOM 20 C5 U A 3 25.455 13.700 -8.549 1.00 17.30 C
ATOM 21 C6 U A 3 26.740 13.954 -8.783 1.00 16.30 C
ATOM 22 P G A 4 33.297 15.204 -9.140 1.00 17.49 P
ATOM 23 OP1 G A 4 34.050 16.067 -8.226 1.00 18.54 O
ATOM 24 OP2 G A 4 33.318 15.488 -10.600 1.00 17.04 O
ATOM 25 O5' G A 4 33.864 13.727 -8.921 1.00 17.62 O
TER
ATOM 1 O3' G B 1 22.035 12.561 -12.024 1.00 24.90 O
ATOM 2 P C B 2 22.999 11.372 -11.576 1.00 24.16 P
ATOM 3 OP1 C B 2 22.636 10.206 -12.423 1.00 24.74 O
ATOM 4 OP2 C B 2 22.975 11.338 -10.101 1.00 24.04 O
ATOM 5 O5' C B 2 24.413 11.919 -12.065 1.00 21.30 O
ATOM 6 C5' C B 2 24.762 11.871 -13.424 1.00 16.26 C
ATOM 7 C4' C B 2 25.132 13.244 -13.944 1.00 14.43 C
ATOM 8 O4' C B 2 24.021 14.182 -13.856 1.00 14.06 O
ATOM 9 C3' C B 2 26.257 13.911 -13.180 1.00 12.15 C
ATOM 10 O3' C B 2 27.511 13.376 -13.563 1.00 14.63 O
ATOM 11 C2' C B 2 26.094 15.322 -13.721 1.00 10.03 C
ATOM 12 O2' C B 2 26.625 15.455 -15.026 1.00 11.78 O
ATOM 13 C1' C B 2 24.570 15.482 -13.690 1.00 10.93 C
ATOM 14 N1 C B 2 24.153 16.075 -12.387 1.00 7.39 N
ATOM 15 C2 C B 2 24.410 17.435 -12.159 1.00 7.35 C
ATOM 16 O2 C B 2 24.960 18.096 -13.047 1.00 5.70 O
ATOM 17 N3 C B 2 24.058 17.961 -10.960 1.00 7.94 N
ATOM 18 C4 C B 2 23.477 17.217 -10.008 1.00 8.36 C
ATOM 19 N4 C B 2 23.153 17.751 -8.819 1.00 8.86 N
ATOM 20 C5 C B 2 23.194 15.832 -10.233 1.00 9.03 C
ATOM 21 C6 C B 2 23.556 15.326 -11.418 1.00 7.59 C
ATOM 22 P U B 3 28.511 12.631 -12.560 1.00 15.66 P
ATOM 23 OP1 U B 3 29.727 12.376 -13.345 1.00 16.13 O
ATOM 24 OP2 U B 3 27.711 11.557 -11.932 1.00 20.06 O
ATOM 25 O5' U B 3 28.883 13.627 -11.356 1.00 15.64 O
TER
ATOM 2 P U A 3 28.511 12.631 -12.560 1.00 15.66 P
ATOM 3 OP1 U A 3 29.727 12.376 -13.345 1.00 16.13 O
ATOM 4 OP2 U A 3 27.711 11.557 -11.932 1.00 20.06 O
ATOM 5 O5' U A 3 28.883 13.627 -11.356 1.00 15.64 O
ATOM 6 C5' U A 3 29.716 14.740 -11.568 1.00 15.80 C
ATOM 7 C4' U A 3 30.122 15.307 -10.229 1.00 15.34 C
ATOM 8 O4' U A 3 28.934 15.664 -9.489 1.00 13.63 O
ATOM 9 C3' U A 3 30.879 14.313 -9.360 1.00 15.19 C
ATOM 10 O3' U A 3 31.825 14.993 -8.579 1.00 16.23 O
ATOM 11 C2' U A 3 29.806 13.720 -8.474 1.00 15.77 C
ATOM 12 O2' U A 3 30.352 13.264 -7.263 1.00 15.39 O
ATOM 13 C1' U A 3 28.943 14.953 -8.267 1.00 16.50 C
ATOM 14 N1 U A 3 27.523 14.702 -7.931 1.00 16.35 N
ATOM 15 C2 U A 3 27.036 15.263 -6.775 1.00 17.20 C
ATOM 16 O2 U A 3 27.747 15.931 -6.031 1.00 17.32 O
ATOM 17 N3 U A 3 25.707 15.000 -6.557 1.00 17.30 N
ATOM 18 C4 U A 3 24.859 14.246 -7.361 1.00 17.55 C
ATOM 19 O4 U A 3 23.681 14.089 -7.038 1.00 19.25 O
ATOM 20 C5 U A 3 25.455 13.700 -8.549 1.00 17.30 C
ATOM 21 C6 U A 3 26.740 13.954 -8.783 1.00 16.30 C
ATOM 22 P G A 4 33.297 15.204 -9.140 1.00 17.49 P
ATOM 23 OP1 G A 4 34.050 16.067 -8.226 1.00 18.54 O
ATOM 24 OP2 G A 4 33.318 15.488 -10.600 1.00 17.04 O
ATOM 25 O5' G A 4 33.864 13.727 -8.921 1.00 17.62 O
TER
ATOM 1 O3' G B 1 22.035 12.561 -12.024 1.00 24.90 O
ATOM 2 P C B 2 22.999 11.372 -11.576 1.00 24.16 P
ATOM 3 OP1 C B 2 22.636 10.206 -12.423 1.00 24.74 O
ATOM 4 OP2 C B 2 22.975 11.338 -10.101 1.00 24.04 O
ATOM 5 O5' C B 2 24.413 11.919 -12.065 1.00 21.30 O
ATOM 6 C5' C B 2 24.762 11.871 -13.424 1.00 16.26 C
ATOM 7 C4' C B 2 25.132 13.244 -13.944 1.00 14.43 C
ATOM 8 O4' C B 2 24.021 14.182 -13.856 1.00 14.06 O
ATOM 9 C3' C B 2 26.257 13.911 -13.180 1.00 12.15 C
ATOM 10 O3' C B 2 27.511 13.376 -13.563 1.00 14.63 O
ATOM 11 C2' C B 2 26.094 15.322 -13.721 1.00 10.03 C
ATOM 12 O2' C B 2 26.625 15.455 -15.026 1.00 11.78 O
ATOM 13 C1' C B 2 24.570 15.482 -13.690 1.00 10.93 C
ATOM 14 N1 C B 2 24.153 16.075 -12.387 1.00 7.39 N
ATOM 15 C2 C B 2 24.410 17.435 -12.159 1.00 7.35 C
ATOM 16 O2 C B 2 24.960 18.096 -13.047 1.00 5.70 O
ATOM 17 N3 C B 2 24.058 17.961 -10.960 1.00 7.94 N
ATOM 18 C4 C B 2 23.477 17.217 -10.008 1.00 8.36 C
ATOM 19 N4 C B 2 23.153 17.751 -8.819 1.00 8.86 N
ATOM 20 C5 C B 2 23.194 15.832 -10.233 1.00 9.03 C
ATOM 21 C6 C B 2 23.556 15.326 -11.418 1.00 7.59 C
ATOM 22 P U B 3 28.511 12.631 -12.560 1.00 15.66 P
ATOM 23 OP1 U B 3 29.727 12.376 -13.345 1.00 16.13 O
ATOM 24 OP2 U B 3 27.711 11.557 -11.932 1.00 20.06 O
ATOM 25 O5' U B 3 28.883 13.627 -11.356 1.00 15.64 O
TER
Atoms:
C4: (24.859,14.246,-7.361)
N3: (25.707,15.000,-6.557)
OP1: (29.727,12.376,-13.345)
OP2: (27.711,11.557,-11.932)
C2: (27.036,15.263,-6.775)
C1': (28.943,14.953,-8.267)
C3': (30.879,14.313,-9.360)
O5': (28.883,13.627,-11.356)
O4': (28.934,15.664,-9.489)
C5': (29.716,14.740,-11.568)
P: (28.511,12.631,-12.560)
C4': (30.122,15.307,-10.229)
C2': (29.806,13.720,-8.474)
O2': (30.352,13.264,-7.263)
N1: (27.523,14.702,-7.931)
O4: (23.681,14.089,-7.038)
O2: (27.747,15.931,-6.031)
C6: (26.740,13.954,-8.783)
C5: (25.455,13.700,-8.549)
O3': (31.825,14.993,-8.579)
N3: (25.707,15.000,-6.557)
OP1: (29.727,12.376,-13.345)
OP2: (27.711,11.557,-11.932)
C2: (27.036,15.263,-6.775)
C1': (28.943,14.953,-8.267)
C3': (30.879,14.313,-9.360)
O5': (28.883,13.627,-11.356)
O4': (28.934,15.664,-9.489)
C5': (29.716,14.740,-11.568)
P: (28.511,12.631,-12.560)
C4': (30.122,15.307,-10.229)
C2': (29.806,13.720,-8.474)
O2': (30.352,13.264,-7.263)
N1: (27.523,14.702,-7.931)
O4: (23.681,14.089,-7.038)
O2: (27.747,15.931,-6.031)
C6: (26.740,13.954,-8.783)
C5: (25.455,13.700,-8.549)
O3': (31.825,14.993,-8.579)
C2: (24.410,17.435,-12.159)
OP1: (22.636,10.206,-12.423)
OP2: (22.975,11.338,-10.101)
C4: (23.477,17.217,-10.008)
O5': (24.413,11.919,-12.065)
C3': (26.257,13.911,-13.180)
C1': (24.570,15.482,-13.690)
O4': (24.021,14.182,-13.856)
C5': (24.762,11.871,-13.424)
P: (22.999,11.372,-11.576)
O2: (24.960,18.096,-13.047)
C4': (25.132,13.244,-13.944)
C2': (26.094,15.322,-13.721)
O2': (26.625,15.455,-15.026)
N1: (24.153,16.075,-12.387)
N3: (24.058,17.961,-10.960)
N4: (23.153,17.751,-8.819)
C6: (23.556,15.326,-11.418)
C5: (23.194,15.832,-10.233)
O3': (27.511,13.376,-13.563)
OP1: (22.636,10.206,-12.423)
OP2: (22.975,11.338,-10.101)
C4: (23.477,17.217,-10.008)
O5': (24.413,11.919,-12.065)
C3': (26.257,13.911,-13.180)
C1': (24.570,15.482,-13.690)
O4': (24.021,14.182,-13.856)
C5': (24.762,11.871,-13.424)
P: (22.999,11.372,-11.576)
O2: (24.960,18.096,-13.047)
C4': (25.132,13.244,-13.944)
C2': (26.094,15.322,-13.721)
O2': (26.625,15.455,-15.026)
N1: (24.153,16.075,-12.387)
N3: (24.058,17.961,-10.960)
N4: (23.153,17.751,-8.819)
C6: (23.556,15.326,-11.418)
C5: (23.194,15.832,-10.233)
O3': (27.511,13.376,-13.563)
Image (generated by PyMOL):