Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2S:G3:G2
Extra
PDB:
ATOM 1 O3' C A 2 -0.444 13.295 -13.481 1.00 20.48 O
ATOM 2 P U A 3 0.537 12.517 -12.498 1.00 23.50 P
ATOM 3 OP1 U A 3 1.783 12.176 -13.204 1.00 26.39 O
ATOM 4 OP2 U A 3 -0.306 11.477 -11.857 1.00 26.78 O
ATOM 5 O5' U A 3 0.957 13.530 -11.331 1.00 22.48 O
ATOM 6 C5' U A 3 1.869 14.596 -11.562 1.00 21.71 C
ATOM 7 C4' U A 3 2.295 15.206 -10.247 1.00 20.33 C
ATOM 8 O4' U A 3 1.114 15.603 -9.506 1.00 18.76 O
ATOM 9 C3' U A 3 3.062 14.244 -9.350 1.00 20.64 C
ATOM 10 O3' U A 3 3.984 14.961 -8.594 1.00 21.67 O
ATOM 11 C2' U A 3 1.967 13.667 -8.473 1.00 20.52 C
ATOM 12 O2' U A 3 2.436 13.143 -7.248 1.00 20.94 O
ATOM 13 C1' U A 3 1.112 14.910 -8.269 1.00 20.89 C
ATOM 14 N1 U A 3 -0.309 14.650 -7.919 1.00 19.59 N
ATOM 15 C2 U A 3 -0.794 15.134 -6.719 1.00 20.80 C
ATOM 16 O2 U A 3 -0.104 15.749 -5.915 1.00 20.24 O
ATOM 17 N3 U A 3 -2.116 14.843 -6.499 1.00 20.37 N
ATOM 18 C4 U A 3 -2.963 14.140 -7.337 1.00 20.91 C
ATOM 19 O4 U A 3 -4.125 13.956 -7.006 1.00 21.72 O
ATOM 20 C5 U A 3 -2.379 13.670 -8.566 1.00 19.49 C
ATOM 21 C6 U A 3 -1.100 13.951 -8.805 1.00 19.34 C
ATOM 22 P G A 4 5.458 15.185 -9.138 1.00 23.87 P
ATOM 23 OP1 G A 4 6.211 16.057 -8.224 1.00 21.75 O
ATOM 24 OP2 G A 4 5.446 15.435 -10.604 1.00 20.69 O
ATOM 25 O5' G A 4 6.001 13.696 -8.931 1.00 23.76 O
TER
ATOM 1 O3' G B 1 -5.904 12.414 -12.072 1.00 24.58 O
ATOM 2 P C B 2 -4.949 11.222 -11.634 1.00 26.39 P
ATOM 3 OP1 C B 2 -5.382 10.083 -12.483 1.00 27.77 O
ATOM 4 OP2 C B 2 -4.927 11.180 -10.164 1.00 26.39 O
ATOM 5 O5' C B 2 -3.486 11.682 -12.066 1.00 24.65 O
ATOM 6 C5' C B 2 -3.160 11.746 -13.435 1.00 20.87 C
ATOM 7 C4' C B 2 -2.820 13.146 -13.915 1.00 18.56 C
ATOM 8 O4' C B 2 -3.942 14.076 -13.879 1.00 17.74 O
ATOM 9 C3' C B 2 -1.711 13.826 -13.142 1.00 17.80 C
ATOM 10 O3' C B 2 -0.444 13.295 -13.481 1.00 20.48 O
ATOM 11 C2' C B 2 -1.885 15.223 -13.708 1.00 14.82 C
ATOM 12 O2' C B 2 -1.419 15.347 -15.041 1.00 16.38 O
ATOM 13 C1' C B 2 -3.402 15.372 -13.673 1.00 16.22 C
ATOM 14 N1 C B 2 -3.777 15.949 -12.350 1.00 14.42 N
ATOM 15 C2 C B 2 -3.588 17.325 -12.139 1.00 13.33 C
ATOM 16 O2 C B 2 -3.125 18.036 -13.041 1.00 12.24 O
ATOM 17 N3 C B 2 -3.900 17.836 -10.924 1.00 12.52 N
ATOM 18 C4 C B 2 -4.385 17.058 -9.945 1.00 14.45 C
ATOM 19 N4 C B 2 -4.687 17.587 -8.755 1.00 13.07 N
ATOM 20 C5 C B 2 -4.581 15.658 -10.151 1.00 14.71 C
ATOM 21 C6 C B 2 -4.269 15.160 -11.353 1.00 15.84 C
ATOM 22 P U B 3 0.537 12.517 -12.498 1.00 23.50 P
ATOM 23 OP1 U B 3 1.783 12.176 -13.204 1.00 26.39 O
ATOM 24 OP2 U B 3 -0.306 11.477 -11.857 1.00 26.78 O
ATOM 25 O5' U B 3 0.957 13.530 -11.331 1.00 22.48 O
TER
ATOM 2 P U A 3 0.537 12.517 -12.498 1.00 23.50 P
ATOM 3 OP1 U A 3 1.783 12.176 -13.204 1.00 26.39 O
ATOM 4 OP2 U A 3 -0.306 11.477 -11.857 1.00 26.78 O
ATOM 5 O5' U A 3 0.957 13.530 -11.331 1.00 22.48 O
ATOM 6 C5' U A 3 1.869 14.596 -11.562 1.00 21.71 C
ATOM 7 C4' U A 3 2.295 15.206 -10.247 1.00 20.33 C
ATOM 8 O4' U A 3 1.114 15.603 -9.506 1.00 18.76 O
ATOM 9 C3' U A 3 3.062 14.244 -9.350 1.00 20.64 C
ATOM 10 O3' U A 3 3.984 14.961 -8.594 1.00 21.67 O
ATOM 11 C2' U A 3 1.967 13.667 -8.473 1.00 20.52 C
ATOM 12 O2' U A 3 2.436 13.143 -7.248 1.00 20.94 O
ATOM 13 C1' U A 3 1.112 14.910 -8.269 1.00 20.89 C
ATOM 14 N1 U A 3 -0.309 14.650 -7.919 1.00 19.59 N
ATOM 15 C2 U A 3 -0.794 15.134 -6.719 1.00 20.80 C
ATOM 16 O2 U A 3 -0.104 15.749 -5.915 1.00 20.24 O
ATOM 17 N3 U A 3 -2.116 14.843 -6.499 1.00 20.37 N
ATOM 18 C4 U A 3 -2.963 14.140 -7.337 1.00 20.91 C
ATOM 19 O4 U A 3 -4.125 13.956 -7.006 1.00 21.72 O
ATOM 20 C5 U A 3 -2.379 13.670 -8.566 1.00 19.49 C
ATOM 21 C6 U A 3 -1.100 13.951 -8.805 1.00 19.34 C
ATOM 22 P G A 4 5.458 15.185 -9.138 1.00 23.87 P
ATOM 23 OP1 G A 4 6.211 16.057 -8.224 1.00 21.75 O
ATOM 24 OP2 G A 4 5.446 15.435 -10.604 1.00 20.69 O
ATOM 25 O5' G A 4 6.001 13.696 -8.931 1.00 23.76 O
TER
ATOM 1 O3' G B 1 -5.904 12.414 -12.072 1.00 24.58 O
ATOM 2 P C B 2 -4.949 11.222 -11.634 1.00 26.39 P
ATOM 3 OP1 C B 2 -5.382 10.083 -12.483 1.00 27.77 O
ATOM 4 OP2 C B 2 -4.927 11.180 -10.164 1.00 26.39 O
ATOM 5 O5' C B 2 -3.486 11.682 -12.066 1.00 24.65 O
ATOM 6 C5' C B 2 -3.160 11.746 -13.435 1.00 20.87 C
ATOM 7 C4' C B 2 -2.820 13.146 -13.915 1.00 18.56 C
ATOM 8 O4' C B 2 -3.942 14.076 -13.879 1.00 17.74 O
ATOM 9 C3' C B 2 -1.711 13.826 -13.142 1.00 17.80 C
ATOM 10 O3' C B 2 -0.444 13.295 -13.481 1.00 20.48 O
ATOM 11 C2' C B 2 -1.885 15.223 -13.708 1.00 14.82 C
ATOM 12 O2' C B 2 -1.419 15.347 -15.041 1.00 16.38 O
ATOM 13 C1' C B 2 -3.402 15.372 -13.673 1.00 16.22 C
ATOM 14 N1 C B 2 -3.777 15.949 -12.350 1.00 14.42 N
ATOM 15 C2 C B 2 -3.588 17.325 -12.139 1.00 13.33 C
ATOM 16 O2 C B 2 -3.125 18.036 -13.041 1.00 12.24 O
ATOM 17 N3 C B 2 -3.900 17.836 -10.924 1.00 12.52 N
ATOM 18 C4 C B 2 -4.385 17.058 -9.945 1.00 14.45 C
ATOM 19 N4 C B 2 -4.687 17.587 -8.755 1.00 13.07 N
ATOM 20 C5 C B 2 -4.581 15.658 -10.151 1.00 14.71 C
ATOM 21 C6 C B 2 -4.269 15.160 -11.353 1.00 15.84 C
ATOM 22 P U B 3 0.537 12.517 -12.498 1.00 23.50 P
ATOM 23 OP1 U B 3 1.783 12.176 -13.204 1.00 26.39 O
ATOM 24 OP2 U B 3 -0.306 11.477 -11.857 1.00 26.78 O
ATOM 25 O5' U B 3 0.957 13.530 -11.331 1.00 22.48 O
TER
Atoms:
C4: (-2.963,14.140,-7.337)
N3: (-2.116,14.843,-6.499)
OP1: (1.783,12.176,-13.204)
OP2: (-0.306,11.477,-11.857)
C2: (-0.794,15.134,-6.719)
C1': (1.112,14.910,-8.269)
C3': (3.062,14.244,-9.350)
O5': (0.957,13.530,-11.331)
O4': (1.114,15.603,-9.506)
C5': (1.869,14.596,-11.562)
P: (0.537,12.517,-12.498)
C4': (2.295,15.206,-10.247)
C2': (1.967,13.667,-8.473)
O2': (2.436,13.143,-7.248)
N1: (-0.309,14.650,-7.919)
O4: (-4.125,13.956,-7.006)
O2: (-0.104,15.749,-5.915)
C6: (-1.100,13.951,-8.805)
C5: (-2.379,13.670,-8.566)
O3': (3.984,14.961,-8.594)
N3: (-2.116,14.843,-6.499)
OP1: (1.783,12.176,-13.204)
OP2: (-0.306,11.477,-11.857)
C2: (-0.794,15.134,-6.719)
C1': (1.112,14.910,-8.269)
C3': (3.062,14.244,-9.350)
O5': (0.957,13.530,-11.331)
O4': (1.114,15.603,-9.506)
C5': (1.869,14.596,-11.562)
P: (0.537,12.517,-12.498)
C4': (2.295,15.206,-10.247)
C2': (1.967,13.667,-8.473)
O2': (2.436,13.143,-7.248)
N1: (-0.309,14.650,-7.919)
O4: (-4.125,13.956,-7.006)
O2: (-0.104,15.749,-5.915)
C6: (-1.100,13.951,-8.805)
C5: (-2.379,13.670,-8.566)
O3': (3.984,14.961,-8.594)
C2: (-3.588,17.325,-12.139)
OP1: (-5.382,10.083,-12.483)
OP2: (-4.927,11.180,-10.164)
C4: (-4.385,17.058,-9.945)
O5': (-3.486,11.682,-12.066)
C3': (-1.711,13.826,-13.142)
C1': (-3.402,15.372,-13.673)
O4': (-3.942,14.076,-13.879)
C5': (-3.160,11.746,-13.435)
P: (-4.949,11.222,-11.634)
O2: (-3.125,18.036,-13.041)
C4': (-2.820,13.146,-13.915)
C2': (-1.885,15.223,-13.708)
O2': (-1.419,15.347,-15.041)
N1: (-3.777,15.949,-12.350)
N3: (-3.900,17.836,-10.924)
N4: (-4.687,17.587,-8.755)
C6: (-4.269,15.160,-11.353)
C5: (-4.581,15.658,-10.151)
O3': (-0.444,13.295,-13.481)
OP1: (-5.382,10.083,-12.483)
OP2: (-4.927,11.180,-10.164)
C4: (-4.385,17.058,-9.945)
O5': (-3.486,11.682,-12.066)
C3': (-1.711,13.826,-13.142)
C1': (-3.402,15.372,-13.673)
O4': (-3.942,14.076,-13.879)
C5': (-3.160,11.746,-13.435)
P: (-4.949,11.222,-11.634)
O2: (-3.125,18.036,-13.041)
C4': (-2.820,13.146,-13.915)
C2': (-1.885,15.223,-13.708)
O2': (-1.419,15.347,-15.041)
N1: (-3.777,15.949,-12.350)
N3: (-3.900,17.836,-10.924)
N4: (-4.687,17.587,-8.755)
C6: (-4.269,15.160,-11.353)
C5: (-4.581,15.658,-10.151)
O3': (-0.444,13.295,-13.481)
Image (generated by PyMOL):