Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:B8:A13
Extra
PDB:
ATOM 1 O3' U A 7 30.000 -10.632 -38.760 1.00 41.31 O
ATOM 2 P A A 8 28.762 -10.250 -39.709 1.00 46.70 P
ATOM 3 OP1 A A 8 28.326 -11.498 -40.379 1.00 46.10 O
ATOM 4 OP2 A A 8 29.191 -9.104 -40.546 1.00 44.69 O
ATOM 5 O5' A A 8 27.654 -9.777 -38.669 1.00 38.27 O
ATOM 6 C5' A A 8 28.000 -8.946 -37.571 1.00 41.83 C
ATOM 7 C4' A A 8 26.962 -9.001 -36.477 1.00 39.76 C
ATOM 8 O4' A A 8 26.742 -10.375 -36.076 1.00 41.27 O
ATOM 9 C3' A A 8 27.320 -8.288 -35.180 1.00 41.92 C
ATOM 10 O3' A A 8 27.090 -6.888 -35.235 1.00 37.13 O
ATOM 11 C2' A A 8 26.456 -9.005 -34.144 1.00 41.87 C
ATOM 12 O2' A A 8 25.143 -8.461 -34.117 1.00 34.30 O
ATOM 13 C1' A A 8 26.385 -10.427 -34.712 1.00 40.16 C
ATOM 14 N9 A A 8 27.293 -11.362 -34.016 1.00 39.09 N
ATOM 15 C8 A A 8 27.001 -12.659 -33.674 1.00 40.62 C
ATOM 16 N7 A A 8 27.972 -13.293 -33.065 1.00 37.23 N
ATOM 17 C5 A A 8 28.982 -12.351 -33.001 1.00 38.71 C
ATOM 18 C6 A A 8 30.275 -12.417 -32.466 1.00 42.45 C
ATOM 19 N6 A A 8 30.771 -13.510 -31.882 1.00 37.88 N
ATOM 20 N1 A A 8 31.043 -11.310 -32.555 1.00 44.13 N
ATOM 21 C2 A A 8 30.532 -10.222 -33.144 1.00 38.38 C
ATOM 22 N3 A A 8 29.329 -10.044 -33.684 1.00 39.31 N
ATOM 23 C4 A A 8 28.586 -11.158 -33.582 1.00 39.69 C
ATOM 24 P A A 9 28.290 -5.873 -35.579 1.00 39.20 P
ATOM 25 OP1 A A 9 27.670 -4.593 -35.999 1.00 40.49 O
ATOM 26 OP2 A A 9 29.196 -6.567 -36.521 1.00 41.61 O
ATOM 27 O5' A A 9 29.014 -5.684 -34.176 1.00 40.54 O
TER
ATOM 1 O3' G B 12 24.151 -14.620 -32.952 1.00 40.48 O
ATOM 2 P C B 13 23.215 -14.185 -34.184 1.00 40.01 P
ATOM 3 OP1 C B 13 24.040 -13.345 -35.084 1.00 37.36 O
ATOM 4 OP2 C B 13 21.976 -13.607 -33.607 1.00 39.70 O
ATOM 5 O5' C B 13 22.887 -15.575 -34.889 1.00 35.52 O
ATOM 6 C5' C B 13 23.889 -16.282 -35.603 1.00 39.59 C
ATOM 7 C4' C B 13 23.369 -17.589 -36.151 1.00 41.08 C
ATOM 8 O4' C B 13 22.897 -18.432 -35.067 1.00 40.50 O
ATOM 9 C3' C B 13 22.171 -17.499 -37.083 1.00 43.62 C
ATOM 10 O3' C B 13 22.514 -17.118 -38.403 1.00 46.61 O
ATOM 11 C2' C B 13 21.581 -18.898 -36.988 1.00 44.79 C
ATOM 12 O2' C B 13 22.342 -19.816 -37.761 1.00 48.90 O
ATOM 13 C1' C B 13 21.803 -19.211 -35.509 1.00 41.22 C
ATOM 14 N1 C B 13 20.619 -18.874 -34.693 1.00 47.28 N
ATOM 15 C2 C B 13 19.602 -19.826 -34.596 1.00 42.94 C
ATOM 16 O2 C B 13 19.735 -20.905 -35.194 1.00 41.62 O
ATOM 17 N3 C B 13 18.507 -19.544 -33.858 1.00 43.94 N
ATOM 18 C4 C B 13 18.409 -18.371 -33.234 1.00 44.30 C
ATOM 19 N4 C B 13 17.307 -18.143 -32.516 1.00 42.56 N
ATOM 20 C5 C B 13 19.433 -17.383 -33.317 1.00 44.48 C
ATOM 21 C6 C B 13 20.514 -17.672 -34.051 1.00 43.33 C
ATOM 22 P G B 14 21.432 -16.375 -39.332 1.00 37.55 P
ATOM 23 OP1 G B 14 22.098 -16.074 -40.623 1.00 40.35 O
ATOM 24 OP2 G B 14 20.871 -15.254 -38.539 1.00 39.70 O
ATOM 25 O5' G B 14 20.320 -17.495 -39.548 1.00 44.46 O
TER
ATOM 2 P A A 8 28.762 -10.250 -39.709 1.00 46.70 P
ATOM 3 OP1 A A 8 28.326 -11.498 -40.379 1.00 46.10 O
ATOM 4 OP2 A A 8 29.191 -9.104 -40.546 1.00 44.69 O
ATOM 5 O5' A A 8 27.654 -9.777 -38.669 1.00 38.27 O
ATOM 6 C5' A A 8 28.000 -8.946 -37.571 1.00 41.83 C
ATOM 7 C4' A A 8 26.962 -9.001 -36.477 1.00 39.76 C
ATOM 8 O4' A A 8 26.742 -10.375 -36.076 1.00 41.27 O
ATOM 9 C3' A A 8 27.320 -8.288 -35.180 1.00 41.92 C
ATOM 10 O3' A A 8 27.090 -6.888 -35.235 1.00 37.13 O
ATOM 11 C2' A A 8 26.456 -9.005 -34.144 1.00 41.87 C
ATOM 12 O2' A A 8 25.143 -8.461 -34.117 1.00 34.30 O
ATOM 13 C1' A A 8 26.385 -10.427 -34.712 1.00 40.16 C
ATOM 14 N9 A A 8 27.293 -11.362 -34.016 1.00 39.09 N
ATOM 15 C8 A A 8 27.001 -12.659 -33.674 1.00 40.62 C
ATOM 16 N7 A A 8 27.972 -13.293 -33.065 1.00 37.23 N
ATOM 17 C5 A A 8 28.982 -12.351 -33.001 1.00 38.71 C
ATOM 18 C6 A A 8 30.275 -12.417 -32.466 1.00 42.45 C
ATOM 19 N6 A A 8 30.771 -13.510 -31.882 1.00 37.88 N
ATOM 20 N1 A A 8 31.043 -11.310 -32.555 1.00 44.13 N
ATOM 21 C2 A A 8 30.532 -10.222 -33.144 1.00 38.38 C
ATOM 22 N3 A A 8 29.329 -10.044 -33.684 1.00 39.31 N
ATOM 23 C4 A A 8 28.586 -11.158 -33.582 1.00 39.69 C
ATOM 24 P A A 9 28.290 -5.873 -35.579 1.00 39.20 P
ATOM 25 OP1 A A 9 27.670 -4.593 -35.999 1.00 40.49 O
ATOM 26 OP2 A A 9 29.196 -6.567 -36.521 1.00 41.61 O
ATOM 27 O5' A A 9 29.014 -5.684 -34.176 1.00 40.54 O
TER
ATOM 1 O3' G B 12 24.151 -14.620 -32.952 1.00 40.48 O
ATOM 2 P C B 13 23.215 -14.185 -34.184 1.00 40.01 P
ATOM 3 OP1 C B 13 24.040 -13.345 -35.084 1.00 37.36 O
ATOM 4 OP2 C B 13 21.976 -13.607 -33.607 1.00 39.70 O
ATOM 5 O5' C B 13 22.887 -15.575 -34.889 1.00 35.52 O
ATOM 6 C5' C B 13 23.889 -16.282 -35.603 1.00 39.59 C
ATOM 7 C4' C B 13 23.369 -17.589 -36.151 1.00 41.08 C
ATOM 8 O4' C B 13 22.897 -18.432 -35.067 1.00 40.50 O
ATOM 9 C3' C B 13 22.171 -17.499 -37.083 1.00 43.62 C
ATOM 10 O3' C B 13 22.514 -17.118 -38.403 1.00 46.61 O
ATOM 11 C2' C B 13 21.581 -18.898 -36.988 1.00 44.79 C
ATOM 12 O2' C B 13 22.342 -19.816 -37.761 1.00 48.90 O
ATOM 13 C1' C B 13 21.803 -19.211 -35.509 1.00 41.22 C
ATOM 14 N1 C B 13 20.619 -18.874 -34.693 1.00 47.28 N
ATOM 15 C2 C B 13 19.602 -19.826 -34.596 1.00 42.94 C
ATOM 16 O2 C B 13 19.735 -20.905 -35.194 1.00 41.62 O
ATOM 17 N3 C B 13 18.507 -19.544 -33.858 1.00 43.94 N
ATOM 18 C4 C B 13 18.409 -18.371 -33.234 1.00 44.30 C
ATOM 19 N4 C B 13 17.307 -18.143 -32.516 1.00 42.56 N
ATOM 20 C5 C B 13 19.433 -17.383 -33.317 1.00 44.48 C
ATOM 21 C6 C B 13 20.514 -17.672 -34.051 1.00 43.33 C
ATOM 22 P G B 14 21.432 -16.375 -39.332 1.00 37.55 P
ATOM 23 OP1 G B 14 22.098 -16.074 -40.623 1.00 40.35 O
ATOM 24 OP2 G B 14 20.871 -15.254 -38.539 1.00 39.70 O
ATOM 25 O5' G B 14 20.320 -17.495 -39.548 1.00 44.46 O
TER
Atoms:
OP1: (28.326,-11.498,-40.379)
OP2: (29.191,-9.104,-40.546)
C3': (27.320,-8.288,-35.180)
C1': (26.385,-10.427,-34.712)
C5': (28.000,-8.946,-37.571)
O4': (26.742,-10.375,-36.076)
C8: (27.001,-12.659,-33.674)
O2': (25.143,-8.461,-34.117)
C6: (30.275,-12.417,-32.466)
C5: (28.982,-12.351,-33.001)
C4: (28.586,-11.158,-33.582)
P: (28.762,-10.250,-39.709)
C4': (26.962,-9.001,-36.477)
C2': (26.456,-9.005,-34.144)
C2: (30.532,-10.222,-33.144)
N1: (31.043,-11.310,-32.555)
N3: (29.329,-10.044,-33.684)
N6: (30.771,-13.510,-31.882)
N7: (27.972,-13.293,-33.065)
N9: (27.293,-11.362,-34.016)
O5': (27.654,-9.777,-38.669)
O3': (27.090,-6.888,-35.235)
OP2: (29.191,-9.104,-40.546)
C3': (27.320,-8.288,-35.180)
C1': (26.385,-10.427,-34.712)
C5': (28.000,-8.946,-37.571)
O4': (26.742,-10.375,-36.076)
C8: (27.001,-12.659,-33.674)
O2': (25.143,-8.461,-34.117)
C6: (30.275,-12.417,-32.466)
C5: (28.982,-12.351,-33.001)
C4: (28.586,-11.158,-33.582)
P: (28.762,-10.250,-39.709)
C4': (26.962,-9.001,-36.477)
C2': (26.456,-9.005,-34.144)
C2: (30.532,-10.222,-33.144)
N1: (31.043,-11.310,-32.555)
N3: (29.329,-10.044,-33.684)
N6: (30.771,-13.510,-31.882)
N7: (27.972,-13.293,-33.065)
N9: (27.293,-11.362,-34.016)
O5': (27.654,-9.777,-38.669)
O3': (27.090,-6.888,-35.235)
C2: (19.602,-19.826,-34.596)
OP1: (24.040,-13.345,-35.084)
OP2: (21.976,-13.607,-33.607)
C4: (18.409,-18.371,-33.234)
O5': (22.887,-15.575,-34.889)
C3': (22.171,-17.499,-37.083)
C1': (21.803,-19.211,-35.509)
O4': (22.897,-18.432,-35.067)
C5': (23.889,-16.282,-35.603)
P: (23.215,-14.185,-34.184)
O2: (19.735,-20.905,-35.194)
C4': (23.369,-17.589,-36.151)
C2': (21.581,-18.898,-36.988)
O2': (22.342,-19.816,-37.761)
N1: (20.619,-18.874,-34.693)
N3: (18.507,-19.544,-33.858)
N4: (17.307,-18.143,-32.516)
C6: (20.514,-17.672,-34.051)
C5: (19.433,-17.383,-33.317)
O3': (22.514,-17.118,-38.403)
OP1: (24.040,-13.345,-35.084)
OP2: (21.976,-13.607,-33.607)
C4: (18.409,-18.371,-33.234)
O5': (22.887,-15.575,-34.889)
C3': (22.171,-17.499,-37.083)
C1': (21.803,-19.211,-35.509)
O4': (22.897,-18.432,-35.067)
C5': (23.889,-16.282,-35.603)
P: (23.215,-14.185,-34.184)
O2: (19.735,-20.905,-35.194)
C4': (23.369,-17.589,-36.151)
C2': (21.581,-18.898,-36.988)
O2': (22.342,-19.816,-37.761)
N1: (20.619,-18.874,-34.693)
N3: (18.507,-19.544,-33.858)
N4: (17.307,-18.143,-32.516)
C6: (20.514,-17.672,-34.051)
C5: (19.433,-17.383,-33.317)
O3': (22.514,-17.118,-38.403)
Image (generated by PyMOL):