Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:C8:D13
Extra
PDB:
ATOM 1 O3' U A 7 24.240 -20.746 -54.053 1.00 44.47 O
ATOM 2 P A A 8 23.280 -19.864 -53.115 1.00 42.52 P
ATOM 3 OP1 A A 8 24.146 -18.903 -52.387 1.00 40.65 O
ATOM 4 OP2 A A 8 22.447 -20.808 -52.332 1.00 44.64 O
ATOM 5 O5' A A 8 22.375 -19.087 -54.168 1.00 40.79 O
ATOM 6 C5' A A 8 21.733 -19.781 -55.228 1.00 44.06 C
ATOM 7 C4' A A 8 21.280 -18.838 -56.315 1.00 42.53 C
ATOM 8 O4' A A 8 22.391 -18.007 -56.734 1.00 42.34 O
ATOM 9 C3' A A 8 20.790 -19.487 -57.604 1.00 44.81 C
ATOM 10 O3' A A 8 19.438 -19.919 -57.530 1.00 43.12 O
ATOM 11 C2' A A 8 21.021 -18.396 -58.648 1.00 42.61 C
ATOM 12 O2' A A 8 19.939 -17.476 -58.662 1.00 40.42 O
ATOM 13 C1' A A 8 22.263 -17.682 -58.101 1.00 42.38 C
ATOM 14 N9 A A 8 23.501 -18.076 -58.804 1.00 41.05 N
ATOM 15 C8 A A 8 24.520 -17.227 -59.156 1.00 42.70 C
ATOM 16 N7 A A 8 25.521 -17.804 -59.772 1.00 36.43 N
ATOM 17 C5 A A 8 25.141 -19.133 -59.834 1.00 39.94 C
ATOM 18 C6 A A 8 25.785 -20.256 -60.375 1.00 42.15 C
ATOM 19 N6 A A 8 26.979 -20.200 -60.969 1.00 39.75 N
ATOM 20 N1 A A 8 25.152 -21.445 -60.281 1.00 43.33 N
ATOM 21 C2 A A 8 23.956 -21.483 -59.682 1.00 39.19 C
ATOM 22 N3 A A 8 23.251 -20.492 -59.137 1.00 40.61 N
ATOM 23 C4 A A 8 23.903 -19.322 -59.242 1.00 40.34 C
ATOM 24 P A A 9 19.080 -21.454 -57.193 1.00 37.48 P
ATOM 25 OP1 A A 9 17.643 -21.494 -56.828 1.00 32.66 O
ATOM 26 OP2 A A 9 20.078 -21.932 -56.208 1.00 45.59 O
ATOM 27 O5' A A 9 19.302 -22.192 -58.587 1.00 47.17 O
TER
ATOM 1 O3' G B 12 24.768 -13.524 -59.759 1.00 39.28 O
ATOM 2 P C B 13 23.889 -12.967 -58.535 1.00 38.83 P
ATOM 3 OP1 C B 13 23.579 -14.122 -57.658 1.00 38.11 O
ATOM 4 OP2 C B 13 22.766 -12.196 -59.121 1.00 42.77 O
ATOM 5 O5' C B 13 24.897 -11.980 -57.795 1.00 37.82 O
ATOM 6 C5' C B 13 26.078 -12.471 -57.178 1.00 39.43 C
ATOM 7 C4' C B 13 26.907 -11.354 -56.591 1.00 36.41 C
ATOM 8 O4' C B 13 27.446 -10.520 -57.652 1.00 38.99 O
ATOM 9 C3' C B 13 26.170 -10.370 -55.699 1.00 41.67 C
ATOM 10 O3' C B 13 25.952 -10.858 -54.388 1.00 48.65 O
ATOM 11 C2' C B 13 27.069 -9.145 -55.756 1.00 40.06 C
ATOM 12 O2' C B 13 28.218 -9.330 -54.943 1.00 46.79 O
ATOM 13 C1' C B 13 27.507 -9.174 -57.218 1.00 38.58 C
ATOM 14 N1 C B 13 26.616 -8.361 -58.073 1.00 42.48 N
ATOM 15 C2 C B 13 26.841 -6.986 -58.174 1.00 37.15 C
ATOM 16 O2 C B 13 27.782 -6.486 -57.540 1.00 40.25 O
ATOM 17 N3 C B 13 26.026 -6.244 -58.955 1.00 36.46 N
ATOM 18 C4 C B 13 25.026 -6.824 -59.619 1.00 37.38 C
ATOM 19 N4 C B 13 24.249 -6.048 -60.379 1.00 39.73 N
ATOM 20 C5 C B 13 24.777 -8.224 -59.534 1.00 34.89 C
ATOM 21 C6 C B 13 25.589 -8.947 -58.758 1.00 35.87 C
ATOM 22 P G B 14 24.732 -10.288 -53.510 1.00 34.63 P
ATOM 23 OP1 G B 14 24.691 -11.076 -52.253 1.00 40.63 O
ATOM 24 OP2 G B 14 23.533 -10.275 -54.383 1.00 42.34 O
ATOM 25 O5' G B 14 25.192 -8.797 -53.198 1.00 42.81 O
TER
ATOM 2 P A A 8 23.280 -19.864 -53.115 1.00 42.52 P
ATOM 3 OP1 A A 8 24.146 -18.903 -52.387 1.00 40.65 O
ATOM 4 OP2 A A 8 22.447 -20.808 -52.332 1.00 44.64 O
ATOM 5 O5' A A 8 22.375 -19.087 -54.168 1.00 40.79 O
ATOM 6 C5' A A 8 21.733 -19.781 -55.228 1.00 44.06 C
ATOM 7 C4' A A 8 21.280 -18.838 -56.315 1.00 42.53 C
ATOM 8 O4' A A 8 22.391 -18.007 -56.734 1.00 42.34 O
ATOM 9 C3' A A 8 20.790 -19.487 -57.604 1.00 44.81 C
ATOM 10 O3' A A 8 19.438 -19.919 -57.530 1.00 43.12 O
ATOM 11 C2' A A 8 21.021 -18.396 -58.648 1.00 42.61 C
ATOM 12 O2' A A 8 19.939 -17.476 -58.662 1.00 40.42 O
ATOM 13 C1' A A 8 22.263 -17.682 -58.101 1.00 42.38 C
ATOM 14 N9 A A 8 23.501 -18.076 -58.804 1.00 41.05 N
ATOM 15 C8 A A 8 24.520 -17.227 -59.156 1.00 42.70 C
ATOM 16 N7 A A 8 25.521 -17.804 -59.772 1.00 36.43 N
ATOM 17 C5 A A 8 25.141 -19.133 -59.834 1.00 39.94 C
ATOM 18 C6 A A 8 25.785 -20.256 -60.375 1.00 42.15 C
ATOM 19 N6 A A 8 26.979 -20.200 -60.969 1.00 39.75 N
ATOM 20 N1 A A 8 25.152 -21.445 -60.281 1.00 43.33 N
ATOM 21 C2 A A 8 23.956 -21.483 -59.682 1.00 39.19 C
ATOM 22 N3 A A 8 23.251 -20.492 -59.137 1.00 40.61 N
ATOM 23 C4 A A 8 23.903 -19.322 -59.242 1.00 40.34 C
ATOM 24 P A A 9 19.080 -21.454 -57.193 1.00 37.48 P
ATOM 25 OP1 A A 9 17.643 -21.494 -56.828 1.00 32.66 O
ATOM 26 OP2 A A 9 20.078 -21.932 -56.208 1.00 45.59 O
ATOM 27 O5' A A 9 19.302 -22.192 -58.587 1.00 47.17 O
TER
ATOM 1 O3' G B 12 24.768 -13.524 -59.759 1.00 39.28 O
ATOM 2 P C B 13 23.889 -12.967 -58.535 1.00 38.83 P
ATOM 3 OP1 C B 13 23.579 -14.122 -57.658 1.00 38.11 O
ATOM 4 OP2 C B 13 22.766 -12.196 -59.121 1.00 42.77 O
ATOM 5 O5' C B 13 24.897 -11.980 -57.795 1.00 37.82 O
ATOM 6 C5' C B 13 26.078 -12.471 -57.178 1.00 39.43 C
ATOM 7 C4' C B 13 26.907 -11.354 -56.591 1.00 36.41 C
ATOM 8 O4' C B 13 27.446 -10.520 -57.652 1.00 38.99 O
ATOM 9 C3' C B 13 26.170 -10.370 -55.699 1.00 41.67 C
ATOM 10 O3' C B 13 25.952 -10.858 -54.388 1.00 48.65 O
ATOM 11 C2' C B 13 27.069 -9.145 -55.756 1.00 40.06 C
ATOM 12 O2' C B 13 28.218 -9.330 -54.943 1.00 46.79 O
ATOM 13 C1' C B 13 27.507 -9.174 -57.218 1.00 38.58 C
ATOM 14 N1 C B 13 26.616 -8.361 -58.073 1.00 42.48 N
ATOM 15 C2 C B 13 26.841 -6.986 -58.174 1.00 37.15 C
ATOM 16 O2 C B 13 27.782 -6.486 -57.540 1.00 40.25 O
ATOM 17 N3 C B 13 26.026 -6.244 -58.955 1.00 36.46 N
ATOM 18 C4 C B 13 25.026 -6.824 -59.619 1.00 37.38 C
ATOM 19 N4 C B 13 24.249 -6.048 -60.379 1.00 39.73 N
ATOM 20 C5 C B 13 24.777 -8.224 -59.534 1.00 34.89 C
ATOM 21 C6 C B 13 25.589 -8.947 -58.758 1.00 35.87 C
ATOM 22 P G B 14 24.732 -10.288 -53.510 1.00 34.63 P
ATOM 23 OP1 G B 14 24.691 -11.076 -52.253 1.00 40.63 O
ATOM 24 OP2 G B 14 23.533 -10.275 -54.383 1.00 42.34 O
ATOM 25 O5' G B 14 25.192 -8.797 -53.198 1.00 42.81 O
TER
Atoms:
OP1: (24.146,-18.903,-52.387)
OP2: (22.447,-20.808,-52.332)
C3': (20.790,-19.487,-57.604)
C1': (22.263,-17.682,-58.101)
C5': (21.733,-19.781,-55.228)
O4': (22.391,-18.007,-56.734)
C8: (24.520,-17.227,-59.156)
O2': (19.939,-17.476,-58.662)
C6: (25.785,-20.256,-60.375)
C5: (25.141,-19.133,-59.834)
C4: (23.903,-19.322,-59.242)
P: (23.280,-19.864,-53.115)
C4': (21.280,-18.838,-56.315)
C2': (21.021,-18.396,-58.648)
C2: (23.956,-21.483,-59.682)
N1: (25.152,-21.445,-60.281)
N3: (23.251,-20.492,-59.137)
N6: (26.979,-20.200,-60.969)
N7: (25.521,-17.804,-59.772)
N9: (23.501,-18.076,-58.804)
O5': (22.375,-19.087,-54.168)
O3': (19.438,-19.919,-57.530)
OP2: (22.447,-20.808,-52.332)
C3': (20.790,-19.487,-57.604)
C1': (22.263,-17.682,-58.101)
C5': (21.733,-19.781,-55.228)
O4': (22.391,-18.007,-56.734)
C8: (24.520,-17.227,-59.156)
O2': (19.939,-17.476,-58.662)
C6: (25.785,-20.256,-60.375)
C5: (25.141,-19.133,-59.834)
C4: (23.903,-19.322,-59.242)
P: (23.280,-19.864,-53.115)
C4': (21.280,-18.838,-56.315)
C2': (21.021,-18.396,-58.648)
C2: (23.956,-21.483,-59.682)
N1: (25.152,-21.445,-60.281)
N3: (23.251,-20.492,-59.137)
N6: (26.979,-20.200,-60.969)
N7: (25.521,-17.804,-59.772)
N9: (23.501,-18.076,-58.804)
O5': (22.375,-19.087,-54.168)
O3': (19.438,-19.919,-57.530)
C2: (26.841,-6.986,-58.174)
OP1: (23.579,-14.122,-57.658)
OP2: (22.766,-12.196,-59.121)
C4: (25.026,-6.824,-59.619)
O5': (24.897,-11.980,-57.795)
C3': (26.170,-10.370,-55.699)
C1': (27.507,-9.174,-57.218)
O4': (27.446,-10.520,-57.652)
C5': (26.078,-12.471,-57.178)
P: (23.889,-12.967,-58.535)
O2: (27.782,-6.486,-57.540)
C4': (26.907,-11.354,-56.591)
C2': (27.069,-9.145,-55.756)
O2': (28.218,-9.330,-54.943)
N1: (26.616,-8.361,-58.073)
N3: (26.026,-6.244,-58.955)
N4: (24.249,-6.048,-60.379)
C6: (25.589,-8.947,-58.758)
C5: (24.777,-8.224,-59.534)
O3': (25.952,-10.858,-54.388)
OP1: (23.579,-14.122,-57.658)
OP2: (22.766,-12.196,-59.121)
C4: (25.026,-6.824,-59.619)
O5': (24.897,-11.980,-57.795)
C3': (26.170,-10.370,-55.699)
C1': (27.507,-9.174,-57.218)
O4': (27.446,-10.520,-57.652)
C5': (26.078,-12.471,-57.178)
P: (23.889,-12.967,-58.535)
O2: (27.782,-6.486,-57.540)
C4': (26.907,-11.354,-56.591)
C2': (27.069,-9.145,-55.756)
O2': (28.218,-9.330,-54.943)
N1: (26.616,-8.361,-58.073)
N3: (26.026,-6.244,-58.955)
N4: (24.249,-6.048,-60.379)
C6: (25.589,-8.947,-58.758)
C5: (24.777,-8.224,-59.534)
O3': (25.952,-10.858,-54.388)
Image (generated by PyMOL):