Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D8:C13
Extra
PDB:
ATOM 1 O3' U A 7 25.580 -8.278 -80.215 1.00 48.08 O
ATOM 2 P A A 8 24.653 -9.110 -81.232 1.00 52.44 P
ATOM 3 OP1 A A 8 25.532 -10.075 -81.938 1.00 44.63 O
ATOM 4 OP2 A A 8 23.888 -8.121 -82.032 1.00 39.11 O
ATOM 5 O5' A A 8 23.671 -9.888 -80.253 1.00 48.47 O
ATOM 6 C5' A A 8 22.937 -9.185 -79.264 1.00 49.13 C
ATOM 7 C4' A A 8 22.393 -10.108 -78.204 1.00 45.43 C
ATOM 8 O4' A A 8 23.453 -10.959 -77.711 1.00 48.52 O
ATOM 9 C3' A A 8 21.849 -9.426 -76.957 1.00 44.94 C
ATOM 10 O3' A A 8 20.517 -8.964 -77.114 1.00 56.58 O
ATOM 11 C2' A A 8 21.998 -10.496 -75.880 1.00 43.28 C
ATOM 12 O2' A A 8 20.892 -11.386 -75.902 1.00 50.65 O
ATOM 13 C1' A A 8 23.242 -11.257 -76.349 1.00 45.94 C
ATOM 14 N9 A A 8 24.455 -10.891 -75.591 1.00 44.94 N
ATOM 15 C8 A A 8 25.408 -11.767 -75.129 1.00 43.31 C
ATOM 16 N7 A A 8 26.400 -11.194 -74.497 1.00 46.19 N
ATOM 17 C5 A A 8 26.086 -9.845 -74.550 1.00 42.96 C
ATOM 18 C6 A A 8 26.752 -8.711 -74.054 1.00 38.05 C
ATOM 19 N6 A A 8 27.907 -8.763 -73.387 1.00 34.91 N
ATOM 20 N1 A A 8 26.183 -7.507 -74.271 1.00 40.58 N
ATOM 21 C2 A A 8 25.025 -7.459 -74.941 1.00 40.85 C
ATOM 22 N3 A A 8 24.303 -8.453 -75.456 1.00 44.09 N
ATOM 23 C4 A A 8 24.894 -9.639 -75.226 1.00 45.66 C
ATOM 24 P A A 9 20.218 -7.486 -77.683 1.00 47.19 P
ATOM 25 OP1 A A 9 18.768 -7.440 -78.023 1.00 38.58 O
ATOM 26 OP2 A A 9 21.221 -7.206 -78.755 1.00 50.00 O
ATOM 27 O5' A A 9 20.504 -6.559 -76.424 1.00 51.26 O
TER
ATOM 1 O3' G B 12 24.132 -14.842 -74.868 1.00 55.18 O
ATOM 2 P C B 13 23.350 -15.480 -76.119 1.00 58.99 P
ATOM 3 OP1 C B 13 23.171 -14.399 -77.120 1.00 60.91 O
ATOM 4 OP2 C B 13 22.147 -16.161 -75.582 1.00 58.34 O
ATOM 5 O5' C B 13 24.383 -16.562 -76.669 1.00 55.52 O
ATOM 6 C5' C B 13 25.512 -16.166 -77.433 1.00 60.09 C
ATOM 7 C4' C B 13 26.367 -17.348 -77.827 1.00 68.04 C
ATOM 8 O4' C B 13 26.739 -18.111 -76.650 1.00 68.67 O
ATOM 9 C3' C B 13 25.719 -18.384 -78.732 1.00 65.07 C
ATOM 10 O3' C B 13 25.660 -17.985 -80.091 1.00 70.26 O
ATOM 11 C2' C B 13 26.595 -19.607 -78.495 1.00 70.82 C
ATOM 12 O2' C B 13 27.818 -19.496 -79.211 1.00 70.04 O
ATOM 13 C1' C B 13 26.894 -19.473 -77.000 1.00 67.55 C
ATOM 14 N1 C B 13 25.972 -20.289 -76.179 1.00 59.74 N
ATOM 15 C2 C B 13 26.284 -21.643 -76.027 1.00 62.27 C
ATOM 16 O2 C B 13 27.307 -22.085 -76.574 1.00 62.63 O
ATOM 17 N3 C B 13 25.470 -22.435 -75.294 1.00 59.15 N
ATOM 18 C4 C B 13 24.381 -21.920 -74.724 1.00 57.79 C
ATOM 19 N4 C B 13 23.607 -22.739 -74.009 1.00 56.46 N
ATOM 20 C5 C B 13 24.038 -20.543 -74.865 1.00 57.38 C
ATOM 21 C6 C B 13 24.851 -19.768 -75.596 1.00 60.69 C
ATOM 22 P G B 14 24.642 -18.714 -81.101 1.00 87.22 P
ATOM 23 OP1 G B 14 24.658 -17.942 -82.369 1.00 82.90 O
ATOM 24 OP2 G B 14 23.355 -18.879 -80.383 1.00 79.08 O
ATOM 25 O5' G B 14 25.322 -20.137 -81.325 1.00 72.16 O
TER
ATOM 2 P A A 8 24.653 -9.110 -81.232 1.00 52.44 P
ATOM 3 OP1 A A 8 25.532 -10.075 -81.938 1.00 44.63 O
ATOM 4 OP2 A A 8 23.888 -8.121 -82.032 1.00 39.11 O
ATOM 5 O5' A A 8 23.671 -9.888 -80.253 1.00 48.47 O
ATOM 6 C5' A A 8 22.937 -9.185 -79.264 1.00 49.13 C
ATOM 7 C4' A A 8 22.393 -10.108 -78.204 1.00 45.43 C
ATOM 8 O4' A A 8 23.453 -10.959 -77.711 1.00 48.52 O
ATOM 9 C3' A A 8 21.849 -9.426 -76.957 1.00 44.94 C
ATOM 10 O3' A A 8 20.517 -8.964 -77.114 1.00 56.58 O
ATOM 11 C2' A A 8 21.998 -10.496 -75.880 1.00 43.28 C
ATOM 12 O2' A A 8 20.892 -11.386 -75.902 1.00 50.65 O
ATOM 13 C1' A A 8 23.242 -11.257 -76.349 1.00 45.94 C
ATOM 14 N9 A A 8 24.455 -10.891 -75.591 1.00 44.94 N
ATOM 15 C8 A A 8 25.408 -11.767 -75.129 1.00 43.31 C
ATOM 16 N7 A A 8 26.400 -11.194 -74.497 1.00 46.19 N
ATOM 17 C5 A A 8 26.086 -9.845 -74.550 1.00 42.96 C
ATOM 18 C6 A A 8 26.752 -8.711 -74.054 1.00 38.05 C
ATOM 19 N6 A A 8 27.907 -8.763 -73.387 1.00 34.91 N
ATOM 20 N1 A A 8 26.183 -7.507 -74.271 1.00 40.58 N
ATOM 21 C2 A A 8 25.025 -7.459 -74.941 1.00 40.85 C
ATOM 22 N3 A A 8 24.303 -8.453 -75.456 1.00 44.09 N
ATOM 23 C4 A A 8 24.894 -9.639 -75.226 1.00 45.66 C
ATOM 24 P A A 9 20.218 -7.486 -77.683 1.00 47.19 P
ATOM 25 OP1 A A 9 18.768 -7.440 -78.023 1.00 38.58 O
ATOM 26 OP2 A A 9 21.221 -7.206 -78.755 1.00 50.00 O
ATOM 27 O5' A A 9 20.504 -6.559 -76.424 1.00 51.26 O
TER
ATOM 1 O3' G B 12 24.132 -14.842 -74.868 1.00 55.18 O
ATOM 2 P C B 13 23.350 -15.480 -76.119 1.00 58.99 P
ATOM 3 OP1 C B 13 23.171 -14.399 -77.120 1.00 60.91 O
ATOM 4 OP2 C B 13 22.147 -16.161 -75.582 1.00 58.34 O
ATOM 5 O5' C B 13 24.383 -16.562 -76.669 1.00 55.52 O
ATOM 6 C5' C B 13 25.512 -16.166 -77.433 1.00 60.09 C
ATOM 7 C4' C B 13 26.367 -17.348 -77.827 1.00 68.04 C
ATOM 8 O4' C B 13 26.739 -18.111 -76.650 1.00 68.67 O
ATOM 9 C3' C B 13 25.719 -18.384 -78.732 1.00 65.07 C
ATOM 10 O3' C B 13 25.660 -17.985 -80.091 1.00 70.26 O
ATOM 11 C2' C B 13 26.595 -19.607 -78.495 1.00 70.82 C
ATOM 12 O2' C B 13 27.818 -19.496 -79.211 1.00 70.04 O
ATOM 13 C1' C B 13 26.894 -19.473 -77.000 1.00 67.55 C
ATOM 14 N1 C B 13 25.972 -20.289 -76.179 1.00 59.74 N
ATOM 15 C2 C B 13 26.284 -21.643 -76.027 1.00 62.27 C
ATOM 16 O2 C B 13 27.307 -22.085 -76.574 1.00 62.63 O
ATOM 17 N3 C B 13 25.470 -22.435 -75.294 1.00 59.15 N
ATOM 18 C4 C B 13 24.381 -21.920 -74.724 1.00 57.79 C
ATOM 19 N4 C B 13 23.607 -22.739 -74.009 1.00 56.46 N
ATOM 20 C5 C B 13 24.038 -20.543 -74.865 1.00 57.38 C
ATOM 21 C6 C B 13 24.851 -19.768 -75.596 1.00 60.69 C
ATOM 22 P G B 14 24.642 -18.714 -81.101 1.00 87.22 P
ATOM 23 OP1 G B 14 24.658 -17.942 -82.369 1.00 82.90 O
ATOM 24 OP2 G B 14 23.355 -18.879 -80.383 1.00 79.08 O
ATOM 25 O5' G B 14 25.322 -20.137 -81.325 1.00 72.16 O
TER
Atoms:
OP1: (25.532,-10.075,-81.938)
OP2: (23.888,-8.121,-82.032)
C3': (21.849,-9.426,-76.957)
C1': (23.242,-11.257,-76.349)
C5': (22.937,-9.185,-79.264)
O4': (23.453,-10.959,-77.711)
C8: (25.408,-11.767,-75.129)
O2': (20.892,-11.386,-75.902)
C6: (26.752,-8.711,-74.054)
C5: (26.086,-9.845,-74.550)
C4: (24.894,-9.639,-75.226)
P: (24.653,-9.110,-81.232)
C4': (22.393,-10.108,-78.204)
C2': (21.998,-10.496,-75.880)
C2: (25.025,-7.459,-74.941)
N1: (26.183,-7.507,-74.271)
N3: (24.303,-8.453,-75.456)
N6: (27.907,-8.763,-73.387)
N7: (26.400,-11.194,-74.497)
N9: (24.455,-10.891,-75.591)
O5': (23.671,-9.888,-80.253)
O3': (20.517,-8.964,-77.114)
OP2: (23.888,-8.121,-82.032)
C3': (21.849,-9.426,-76.957)
C1': (23.242,-11.257,-76.349)
C5': (22.937,-9.185,-79.264)
O4': (23.453,-10.959,-77.711)
C8: (25.408,-11.767,-75.129)
O2': (20.892,-11.386,-75.902)
C6: (26.752,-8.711,-74.054)
C5: (26.086,-9.845,-74.550)
C4: (24.894,-9.639,-75.226)
P: (24.653,-9.110,-81.232)
C4': (22.393,-10.108,-78.204)
C2': (21.998,-10.496,-75.880)
C2: (25.025,-7.459,-74.941)
N1: (26.183,-7.507,-74.271)
N3: (24.303,-8.453,-75.456)
N6: (27.907,-8.763,-73.387)
N7: (26.400,-11.194,-74.497)
N9: (24.455,-10.891,-75.591)
O5': (23.671,-9.888,-80.253)
O3': (20.517,-8.964,-77.114)
C2: (26.284,-21.643,-76.027)
OP1: (23.171,-14.399,-77.120)
OP2: (22.147,-16.161,-75.582)
C4: (24.381,-21.920,-74.724)
O5': (24.383,-16.562,-76.669)
C3': (25.719,-18.384,-78.732)
C1': (26.894,-19.473,-77.000)
O4': (26.739,-18.111,-76.650)
C5': (25.512,-16.166,-77.433)
P: (23.350,-15.480,-76.119)
O2: (27.307,-22.085,-76.574)
C4': (26.367,-17.348,-77.827)
C2': (26.595,-19.607,-78.495)
O2': (27.818,-19.496,-79.211)
N1: (25.972,-20.289,-76.179)
N3: (25.470,-22.435,-75.294)
N4: (23.607,-22.739,-74.009)
C6: (24.851,-19.768,-75.596)
C5: (24.038,-20.543,-74.865)
O3': (25.660,-17.985,-80.091)
OP1: (23.171,-14.399,-77.120)
OP2: (22.147,-16.161,-75.582)
C4: (24.381,-21.920,-74.724)
O5': (24.383,-16.562,-76.669)
C3': (25.719,-18.384,-78.732)
C1': (26.894,-19.473,-77.000)
O4': (26.739,-18.111,-76.650)
C5': (25.512,-16.166,-77.433)
P: (23.350,-15.480,-76.119)
O2: (27.307,-22.085,-76.574)
C4': (26.367,-17.348,-77.827)
C2': (26.595,-19.607,-78.495)
O2': (27.818,-19.496,-79.211)
N1: (25.972,-20.289,-76.179)
N3: (25.470,-22.435,-75.294)
N4: (23.607,-22.739,-74.009)
C6: (24.851,-19.768,-75.596)
C5: (24.038,-20.543,-74.865)
O3': (25.660,-17.985,-80.091)
Image (generated by PyMOL):