Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A36:A35
Extra
PDB:
ATOM 1 O3' C A 35 5.983 21.174 8.909 1.00 34.41 O
ATOM 2 P U A 36 7.499 21.704 8.829 1.00 36.25 P
ATOM 3 OP1 U A 36 7.539 23.083 9.376 1.00 36.18 O
ATOM 4 OP2 U A 36 8.005 21.445 7.457 1.00 35.49 O
ATOM 5 O5' U A 36 8.288 20.751 9.830 1.00 34.89 O
ATOM 6 C5' U A 36 8.062 20.822 11.233 1.00 34.65 C
ATOM 7 C4' U A 36 8.621 19.598 11.918 1.00 33.67 C
ATOM 8 O4' U A 36 7.979 18.407 11.391 1.00 33.41 O
ATOM 9 C3' U A 36 10.100 19.320 11.703 1.00 33.54 C
ATOM 10 O3' U A 36 10.904 20.114 12.569 1.00 33.79 O
ATOM 11 C2' U A 36 10.176 17.846 12.074 1.00 33.00 C
ATOM 12 O2' U A 36 10.117 17.638 13.472 1.00 33.70 O
ATOM 13 C1' U A 36 8.891 17.319 11.434 1.00 32.26 C
ATOM 14 N1 U A 36 9.092 16.825 10.064 1.00 30.58 N
ATOM 15 C2 U A 36 9.619 15.558 9.914 1.00 30.05 C
ATOM 16 O2 U A 36 9.931 14.858 10.860 1.00 29.91 O
ATOM 17 N3 U A 36 9.773 15.143 8.614 1.00 29.01 N
ATOM 18 C4 U A 36 9.466 15.853 7.474 1.00 28.85 C
ATOM 19 O4 U A 36 9.648 15.337 6.371 1.00 28.03 O
ATOM 20 C5 U A 36 8.932 17.159 7.713 1.00 29.54 C
ATOM 21 C6 U A 36 8.767 17.589 8.969 1.00 30.05 C
ATOM 22 P A A 37 12.463 20.327 12.239 1.00 34.09 P
ATOM 23 OP1 A A 37 13.050 21.117 13.351 1.00 34.47 O
ATOM 24 OP2 A A 37 12.591 20.817 10.844 1.00 33.63 O
ATOM 25 O5' A A 37 13.081 18.860 12.293 1.00 32.46 O
TER
ATOM 1 O3' U B 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 2 P C B 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 3 OP1 C B 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 4 OP2 C B 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 5 O5' C B 35 5.896 19.289 5.792 1.00 34.48 O
ATOM 6 C5' C B 35 4.717 19.993 6.175 1.00 33.87 C
ATOM 7 C4' C B 35 4.450 19.790 7.645 1.00 33.30 C
ATOM 8 O4' C B 35 3.902 18.460 7.849 1.00 32.75 O
ATOM 9 C3' C B 35 5.683 19.833 8.533 1.00 33.59 C
ATOM 10 O3' C B 35 5.983 21.174 8.909 1.00 34.41 O
ATOM 11 C2' C B 35 5.239 19.007 9.733 1.00 32.94 C
ATOM 12 O2' C B 35 4.432 19.738 10.631 1.00 33.35 O
ATOM 13 C1' C B 35 4.399 17.920 9.060 1.00 32.29 C
ATOM 14 N1 C B 35 5.156 16.697 8.749 1.00 30.92 N
ATOM 15 C2 C B 35 5.633 15.918 9.805 1.00 30.44 C
ATOM 16 O2 C B 35 5.411 16.285 10.965 1.00 30.29 O
ATOM 17 N3 C B 35 6.323 14.785 9.536 1.00 30.11 N
ATOM 18 C4 C B 35 6.540 14.422 8.270 1.00 29.90 C
ATOM 19 N4 C B 35 7.221 13.296 8.052 1.00 29.31 N
ATOM 20 C5 C B 35 6.066 15.199 7.171 1.00 30.22 C
ATOM 21 C6 C B 35 5.386 16.320 7.455 1.00 30.82 C
ATOM 22 P U B 36 7.499 21.704 8.829 1.00 36.25 P
ATOM 23 OP1 U B 36 7.539 23.083 9.376 1.00 36.18 O
ATOM 24 OP2 U B 36 8.005 21.445 7.457 1.00 35.49 O
ATOM 25 O5' U B 36 8.288 20.751 9.830 1.00 34.89 O
TER
ATOM 2 P U A 36 7.499 21.704 8.829 1.00 36.25 P
ATOM 3 OP1 U A 36 7.539 23.083 9.376 1.00 36.18 O
ATOM 4 OP2 U A 36 8.005 21.445 7.457 1.00 35.49 O
ATOM 5 O5' U A 36 8.288 20.751 9.830 1.00 34.89 O
ATOM 6 C5' U A 36 8.062 20.822 11.233 1.00 34.65 C
ATOM 7 C4' U A 36 8.621 19.598 11.918 1.00 33.67 C
ATOM 8 O4' U A 36 7.979 18.407 11.391 1.00 33.41 O
ATOM 9 C3' U A 36 10.100 19.320 11.703 1.00 33.54 C
ATOM 10 O3' U A 36 10.904 20.114 12.569 1.00 33.79 O
ATOM 11 C2' U A 36 10.176 17.846 12.074 1.00 33.00 C
ATOM 12 O2' U A 36 10.117 17.638 13.472 1.00 33.70 O
ATOM 13 C1' U A 36 8.891 17.319 11.434 1.00 32.26 C
ATOM 14 N1 U A 36 9.092 16.825 10.064 1.00 30.58 N
ATOM 15 C2 U A 36 9.619 15.558 9.914 1.00 30.05 C
ATOM 16 O2 U A 36 9.931 14.858 10.860 1.00 29.91 O
ATOM 17 N3 U A 36 9.773 15.143 8.614 1.00 29.01 N
ATOM 18 C4 U A 36 9.466 15.853 7.474 1.00 28.85 C
ATOM 19 O4 U A 36 9.648 15.337 6.371 1.00 28.03 O
ATOM 20 C5 U A 36 8.932 17.159 7.713 1.00 29.54 C
ATOM 21 C6 U A 36 8.767 17.589 8.969 1.00 30.05 C
ATOM 22 P A A 37 12.463 20.327 12.239 1.00 34.09 P
ATOM 23 OP1 A A 37 13.050 21.117 13.351 1.00 34.47 O
ATOM 24 OP2 A A 37 12.591 20.817 10.844 1.00 33.63 O
ATOM 25 O5' A A 37 13.081 18.860 12.293 1.00 32.46 O
TER
ATOM 1 O3' U B 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 2 P C B 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 3 OP1 C B 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 4 OP2 C B 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 5 O5' C B 35 5.896 19.289 5.792 1.00 34.48 O
ATOM 6 C5' C B 35 4.717 19.993 6.175 1.00 33.87 C
ATOM 7 C4' C B 35 4.450 19.790 7.645 1.00 33.30 C
ATOM 8 O4' C B 35 3.902 18.460 7.849 1.00 32.75 O
ATOM 9 C3' C B 35 5.683 19.833 8.533 1.00 33.59 C
ATOM 10 O3' C B 35 5.983 21.174 8.909 1.00 34.41 O
ATOM 11 C2' C B 35 5.239 19.007 9.733 1.00 32.94 C
ATOM 12 O2' C B 35 4.432 19.738 10.631 1.00 33.35 O
ATOM 13 C1' C B 35 4.399 17.920 9.060 1.00 32.29 C
ATOM 14 N1 C B 35 5.156 16.697 8.749 1.00 30.92 N
ATOM 15 C2 C B 35 5.633 15.918 9.805 1.00 30.44 C
ATOM 16 O2 C B 35 5.411 16.285 10.965 1.00 30.29 O
ATOM 17 N3 C B 35 6.323 14.785 9.536 1.00 30.11 N
ATOM 18 C4 C B 35 6.540 14.422 8.270 1.00 29.90 C
ATOM 19 N4 C B 35 7.221 13.296 8.052 1.00 29.31 N
ATOM 20 C5 C B 35 6.066 15.199 7.171 1.00 30.22 C
ATOM 21 C6 C B 35 5.386 16.320 7.455 1.00 30.82 C
ATOM 22 P U B 36 7.499 21.704 8.829 1.00 36.25 P
ATOM 23 OP1 U B 36 7.539 23.083 9.376 1.00 36.18 O
ATOM 24 OP2 U B 36 8.005 21.445 7.457 1.00 35.49 O
ATOM 25 O5' U B 36 8.288 20.751 9.830 1.00 34.89 O
TER
Atoms:
C4: (9.466,15.853,7.474)
N3: (9.773,15.143,8.614)
OP1: (7.539,23.083,9.376)
OP2: (8.005,21.445,7.457)
C2: (9.619,15.558,9.914)
C1': (8.891,17.319,11.434)
C3': (10.100,19.320,11.703)
O5': (8.288,20.751,9.830)
O4': (7.979,18.407,11.391)
C5': (8.062,20.822,11.233)
P: (7.499,21.704,8.829)
C4': (8.621,19.598,11.918)
C2': (10.176,17.846,12.074)
O2': (10.117,17.638,13.472)
N1: (9.092,16.825,10.064)
O4: (9.648,15.337,6.371)
O2: (9.931,14.858,10.860)
C6: (8.767,17.589,8.969)
C5: (8.932,17.159,7.713)
O3': (10.904,20.114,12.569)
N3: (9.773,15.143,8.614)
OP1: (7.539,23.083,9.376)
OP2: (8.005,21.445,7.457)
C2: (9.619,15.558,9.914)
C1': (8.891,17.319,11.434)
C3': (10.100,19.320,11.703)
O5': (8.288,20.751,9.830)
O4': (7.979,18.407,11.391)
C5': (8.062,20.822,11.233)
P: (7.499,21.704,8.829)
C4': (8.621,19.598,11.918)
C2': (10.176,17.846,12.074)
O2': (10.117,17.638,13.472)
N1: (9.092,16.825,10.064)
O4: (9.648,15.337,6.371)
O2: (9.931,14.858,10.860)
C6: (8.767,17.589,8.969)
C5: (8.932,17.159,7.713)
O3': (10.904,20.114,12.569)
C2: (5.633,15.918,9.805)
OP1: (5.848,19.990,3.404)
OP2: (7.425,18.130,4.208)
C4: (6.540,14.422,8.270)
O5': (5.896,19.289,5.792)
C3': (5.683,19.833,8.533)
C1': (4.399,17.920,9.060)
O4': (3.902,18.460,7.849)
C5': (4.717,19.993,6.175)
P: (6.113,18.825,4.286)
O2: (5.411,16.285,10.965)
C4': (4.450,19.790,7.645)
C2': (5.239,19.007,9.733)
O2': (4.432,19.738,10.631)
N1: (5.156,16.697,8.749)
N3: (6.323,14.785,9.536)
N4: (7.221,13.296,8.052)
C6: (5.386,16.320,7.455)
C5: (6.066,15.199,7.171)
O3': (5.983,21.174,8.909)
OP1: (5.848,19.990,3.404)
OP2: (7.425,18.130,4.208)
C4: (6.540,14.422,8.270)
O5': (5.896,19.289,5.792)
C3': (5.683,19.833,8.533)
C1': (4.399,17.920,9.060)
O4': (3.902,18.460,7.849)
C5': (4.717,19.993,6.175)
P: (6.113,18.825,4.286)
O2: (5.411,16.285,10.965)
C4': (4.450,19.790,7.645)
C2': (5.239,19.007,9.733)
O2': (4.432,19.738,10.631)
N1: (5.156,16.697,8.749)
N3: (6.323,14.785,9.536)
N4: (7.221,13.296,8.052)
C6: (5.386,16.320,7.455)
C5: (6.066,15.199,7.171)
O3': (5.983,21.174,8.909)
Image (generated by PyMOL):