Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1351:A1341
Extra
PDB:
ATOM 1 O3' A A1350 10.938 -50.951 -22.708 1.00 48.48 O
ATOM 2 P U A1351 11.770 -49.924 -21.808 1.00 48.71 P
ATOM 3 OP1 U A1351 13.134 -49.857 -22.420 1.00 47.82 O
ATOM 4 OP2 U A1351 11.630 -50.312 -20.379 1.00 49.45 O
ATOM 5 O5' U A1351 10.957 -48.576 -22.030 1.00 44.35 O
ATOM 6 C5' U A1351 9.602 -48.512 -21.626 1.00 44.41 C
ATOM 7 C4' U A1351 8.829 -47.486 -22.420 1.00 52.47 C
ATOM 8 O4' U A1351 9.162 -46.139 -22.011 1.00 52.28 O
ATOM 9 C3' U A1351 8.852 -47.519 -23.954 1.00 53.04 C
ATOM 10 O3' U A1351 7.513 -47.445 -24.436 1.00 56.38 O
ATOM 11 C2' U A1351 9.578 -46.223 -24.312 1.00 42.73 C
ATOM 12 O2' U A1351 9.129 -45.672 -25.530 1.00 43.43 O
ATOM 13 C1' U A1351 9.163 -45.321 -23.149 1.00 49.94 C
ATOM 14 N1 U A1351 9.972 -44.118 -22.898 1.00 56.36 N
ATOM 15 C2 U A1351 11.351 -44.231 -22.789 1.00 57.18 C
ATOM 16 O2 U A1351 11.959 -45.291 -22.841 1.00 54.15 O
ATOM 17 N3 U A1351 12.001 -43.036 -22.617 1.00 55.66 N
ATOM 18 C4 U A1351 11.435 -41.774 -22.554 1.00 59.09 C
ATOM 19 O4 U A1351 12.165 -40.782 -22.679 1.00 69.78 O
ATOM 20 C5 U A1351 10.015 -41.761 -22.626 1.00 51.97 C
ATOM 21 C6 U A1351 9.352 -42.896 -22.795 1.00 53.97 C
ATOM 22 P U A1352 6.708 -48.809 -24.732 1.00 56.10 P
ATOM 23 OP1 U A1352 5.360 -48.429 -25.227 1.00 56.44 O
ATOM 24 OP2 U A1352 6.830 -49.727 -23.559 1.00 46.96 O
ATOM 25 O5' U A1352 7.505 -49.475 -25.938 1.00 52.14 O
TER
ATOM 1 O3' G B1340 9.388 -39.248 -23.452 1.00 64.48 O
ATOM 2 P C B1341 9.202 -38.360 -22.092 1.00 67.77 P
ATOM 3 OP1 C B1341 8.836 -36.954 -22.417 1.00 57.11 O
ATOM 4 OP2 C B1341 10.439 -38.601 -21.324 1.00 64.33 O
ATOM 5 O5' C B1341 7.986 -38.992 -21.244 1.00 62.37 O
ATOM 6 C5' C B1341 8.203 -39.759 -20.034 1.00 58.93 C
ATOM 7 C4' C B1341 6.932 -39.821 -19.174 1.00 67.42 C
ATOM 8 O4' C B1341 5.746 -39.589 -19.985 1.00 65.24 O
ATOM 9 C3' C B1341 6.666 -41.167 -18.478 1.00 71.45 C
ATOM 10 O3' C B1341 7.352 -41.296 -17.223 1.00 74.39 O
ATOM 11 C2' C B1341 5.143 -41.194 -18.310 1.00 66.39 C
ATOM 12 O2' C B1341 4.619 -40.586 -17.160 1.00 62.99 O
ATOM 13 C1' C B1341 4.669 -40.383 -19.515 1.00 59.68 C
ATOM 14 N1 C B1341 4.188 -41.242 -20.598 1.00 55.78 N
ATOM 15 C2 C B1341 2.845 -41.597 -20.629 1.00 60.53 C
ATOM 16 O2 C B1341 2.086 -41.171 -19.750 1.00 68.25 O
ATOM 17 N3 C B1341 2.402 -42.394 -21.618 1.00 62.24 N
ATOM 18 C4 C B1341 3.252 -42.839 -22.544 1.00 58.42 C
ATOM 19 N4 C B1341 2.777 -43.637 -23.514 1.00 63.23 N
ATOM 20 C5 C B1341 4.626 -42.493 -22.527 1.00 54.63 C
ATOM 21 C6 C B1341 5.044 -41.701 -21.550 1.00 56.57 C
ATOM 22 P C B1342 7.328 -42.698 -16.414 1.00 59.77 P
ATOM 23 OP1 C B1342 8.244 -42.522 -15.246 1.00 67.99 O
ATOM 24 OP2 C B1342 7.541 -43.849 -17.352 1.00 51.35 O
ATOM 25 O5' C B1342 5.821 -42.805 -15.904 1.00 66.90 O
TER
ATOM 2 P U A1351 11.770 -49.924 -21.808 1.00 48.71 P
ATOM 3 OP1 U A1351 13.134 -49.857 -22.420 1.00 47.82 O
ATOM 4 OP2 U A1351 11.630 -50.312 -20.379 1.00 49.45 O
ATOM 5 O5' U A1351 10.957 -48.576 -22.030 1.00 44.35 O
ATOM 6 C5' U A1351 9.602 -48.512 -21.626 1.00 44.41 C
ATOM 7 C4' U A1351 8.829 -47.486 -22.420 1.00 52.47 C
ATOM 8 O4' U A1351 9.162 -46.139 -22.011 1.00 52.28 O
ATOM 9 C3' U A1351 8.852 -47.519 -23.954 1.00 53.04 C
ATOM 10 O3' U A1351 7.513 -47.445 -24.436 1.00 56.38 O
ATOM 11 C2' U A1351 9.578 -46.223 -24.312 1.00 42.73 C
ATOM 12 O2' U A1351 9.129 -45.672 -25.530 1.00 43.43 O
ATOM 13 C1' U A1351 9.163 -45.321 -23.149 1.00 49.94 C
ATOM 14 N1 U A1351 9.972 -44.118 -22.898 1.00 56.36 N
ATOM 15 C2 U A1351 11.351 -44.231 -22.789 1.00 57.18 C
ATOM 16 O2 U A1351 11.959 -45.291 -22.841 1.00 54.15 O
ATOM 17 N3 U A1351 12.001 -43.036 -22.617 1.00 55.66 N
ATOM 18 C4 U A1351 11.435 -41.774 -22.554 1.00 59.09 C
ATOM 19 O4 U A1351 12.165 -40.782 -22.679 1.00 69.78 O
ATOM 20 C5 U A1351 10.015 -41.761 -22.626 1.00 51.97 C
ATOM 21 C6 U A1351 9.352 -42.896 -22.795 1.00 53.97 C
ATOM 22 P U A1352 6.708 -48.809 -24.732 1.00 56.10 P
ATOM 23 OP1 U A1352 5.360 -48.429 -25.227 1.00 56.44 O
ATOM 24 OP2 U A1352 6.830 -49.727 -23.559 1.00 46.96 O
ATOM 25 O5' U A1352 7.505 -49.475 -25.938 1.00 52.14 O
TER
ATOM 1 O3' G B1340 9.388 -39.248 -23.452 1.00 64.48 O
ATOM 2 P C B1341 9.202 -38.360 -22.092 1.00 67.77 P
ATOM 3 OP1 C B1341 8.836 -36.954 -22.417 1.00 57.11 O
ATOM 4 OP2 C B1341 10.439 -38.601 -21.324 1.00 64.33 O
ATOM 5 O5' C B1341 7.986 -38.992 -21.244 1.00 62.37 O
ATOM 6 C5' C B1341 8.203 -39.759 -20.034 1.00 58.93 C
ATOM 7 C4' C B1341 6.932 -39.821 -19.174 1.00 67.42 C
ATOM 8 O4' C B1341 5.746 -39.589 -19.985 1.00 65.24 O
ATOM 9 C3' C B1341 6.666 -41.167 -18.478 1.00 71.45 C
ATOM 10 O3' C B1341 7.352 -41.296 -17.223 1.00 74.39 O
ATOM 11 C2' C B1341 5.143 -41.194 -18.310 1.00 66.39 C
ATOM 12 O2' C B1341 4.619 -40.586 -17.160 1.00 62.99 O
ATOM 13 C1' C B1341 4.669 -40.383 -19.515 1.00 59.68 C
ATOM 14 N1 C B1341 4.188 -41.242 -20.598 1.00 55.78 N
ATOM 15 C2 C B1341 2.845 -41.597 -20.629 1.00 60.53 C
ATOM 16 O2 C B1341 2.086 -41.171 -19.750 1.00 68.25 O
ATOM 17 N3 C B1341 2.402 -42.394 -21.618 1.00 62.24 N
ATOM 18 C4 C B1341 3.252 -42.839 -22.544 1.00 58.42 C
ATOM 19 N4 C B1341 2.777 -43.637 -23.514 1.00 63.23 N
ATOM 20 C5 C B1341 4.626 -42.493 -22.527 1.00 54.63 C
ATOM 21 C6 C B1341 5.044 -41.701 -21.550 1.00 56.57 C
ATOM 22 P C B1342 7.328 -42.698 -16.414 1.00 59.77 P
ATOM 23 OP1 C B1342 8.244 -42.522 -15.246 1.00 67.99 O
ATOM 24 OP2 C B1342 7.541 -43.849 -17.352 1.00 51.35 O
ATOM 25 O5' C B1342 5.821 -42.805 -15.904 1.00 66.90 O
TER
Atoms:
C4: (11.435,-41.774,-22.554)
N3: (12.001,-43.036,-22.617)
OP1: (13.134,-49.857,-22.420)
OP2: (11.630,-50.312,-20.379)
C2: (11.351,-44.231,-22.789)
C1': (9.163,-45.321,-23.149)
C3': (8.852,-47.519,-23.954)
O5': (10.957,-48.576,-22.030)
O4': (9.162,-46.139,-22.011)
C5': (9.602,-48.512,-21.626)
P: (11.770,-49.924,-21.808)
C4': (8.829,-47.486,-22.420)
C2': (9.578,-46.223,-24.312)
O2': (9.129,-45.672,-25.530)
N1: (9.972,-44.118,-22.898)
O4: (12.165,-40.782,-22.679)
O2: (11.959,-45.291,-22.841)
C6: (9.352,-42.896,-22.795)
C5: (10.015,-41.761,-22.626)
O3': (7.513,-47.445,-24.436)
N3: (12.001,-43.036,-22.617)
OP1: (13.134,-49.857,-22.420)
OP2: (11.630,-50.312,-20.379)
C2: (11.351,-44.231,-22.789)
C1': (9.163,-45.321,-23.149)
C3': (8.852,-47.519,-23.954)
O5': (10.957,-48.576,-22.030)
O4': (9.162,-46.139,-22.011)
C5': (9.602,-48.512,-21.626)
P: (11.770,-49.924,-21.808)
C4': (8.829,-47.486,-22.420)
C2': (9.578,-46.223,-24.312)
O2': (9.129,-45.672,-25.530)
N1: (9.972,-44.118,-22.898)
O4: (12.165,-40.782,-22.679)
O2: (11.959,-45.291,-22.841)
C6: (9.352,-42.896,-22.795)
C5: (10.015,-41.761,-22.626)
O3': (7.513,-47.445,-24.436)
C2: (2.845,-41.597,-20.629)
OP1: (8.836,-36.954,-22.417)
OP2: (10.439,-38.601,-21.324)
C4: (3.252,-42.839,-22.544)
O5': (7.986,-38.992,-21.244)
C3': (6.666,-41.167,-18.478)
C1': (4.669,-40.383,-19.515)
O4': (5.746,-39.589,-19.985)
C5': (8.203,-39.759,-20.034)
P: (9.202,-38.360,-22.092)
O2: (2.086,-41.171,-19.750)
C4': (6.932,-39.821,-19.174)
C2': (5.143,-41.194,-18.310)
O2': (4.619,-40.586,-17.160)
N1: (4.188,-41.242,-20.598)
N3: (2.402,-42.394,-21.618)
N4: (2.777,-43.637,-23.514)
C6: (5.044,-41.701,-21.550)
C5: (4.626,-42.493,-22.527)
O3': (7.352,-41.296,-17.223)
OP1: (8.836,-36.954,-22.417)
OP2: (10.439,-38.601,-21.324)
C4: (3.252,-42.839,-22.544)
O5': (7.986,-38.992,-21.244)
C3': (6.666,-41.167,-18.478)
C1': (4.669,-40.383,-19.515)
O4': (5.746,-39.589,-19.985)
C5': (8.203,-39.759,-20.034)
P: (9.202,-38.360,-22.092)
O2: (2.086,-41.171,-19.750)
C4': (6.932,-39.821,-19.174)
C2': (5.143,-41.194,-18.310)
O2': (4.619,-40.586,-17.160)
N1: (4.188,-41.242,-20.598)
N3: (2.402,-42.394,-21.618)
N4: (2.777,-43.637,-23.514)
C6: (5.044,-41.701,-21.550)
C5: (4.626,-42.493,-22.527)
O3': (7.352,-41.296,-17.223)
Image (generated by PyMOL):