Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2007:A2131
Extra
PDB:
ATOM 1 O3' U A2006 62.371 -13.397 -70.919 1.00 50.14 O
ATOM 2 P U A2007 61.806 -11.890 -70.837 1.00 68.32 P
ATOM 3 OP1 U A2007 61.176 -11.710 -69.493 1.00 66.24 O
ATOM 4 OP2 U A2007 61.003 -11.652 -72.070 1.00 61.37 O
ATOM 5 O5' U A2007 63.117 -10.970 -70.902 1.00 55.19 O
ATOM 6 C5' U A2007 63.177 -9.822 -71.750 1.00 52.16 C
ATOM 7 C4' U A2007 64.432 -9.028 -71.475 1.00 49.44 C
ATOM 8 O4' U A2007 64.379 -8.482 -70.140 1.00 51.30 O
ATOM 9 C3' U A2007 65.752 -9.784 -71.543 1.00 52.45 C
ATOM 10 O3' U A2007 66.218 -9.950 -72.905 1.00 51.59 O
ATOM 11 C2' U A2007 66.681 -9.029 -70.585 1.00 52.92 C
ATOM 12 O2' U A2007 67.466 -8.030 -71.203 1.00 54.83 O
ATOM 13 C1' U A2007 65.690 -8.361 -69.624 1.00 53.16 C
ATOM 14 N1 U A2007 65.697 -8.692 -68.185 1.00 49.39 N
ATOM 15 C2 U A2007 64.565 -9.302 -67.635 1.00 56.89 C
ATOM 16 O2 U A2007 63.603 -9.656 -68.303 1.00 58.83 O
ATOM 17 N3 U A2007 64.603 -9.489 -66.272 1.00 56.13 N
ATOM 18 C4 U A2007 65.626 -9.162 -65.418 1.00 55.55 C
ATOM 19 O4 U A2007 65.478 -9.350 -64.205 1.00 51.56 O
ATOM 20 C5 U A2007 66.778 -8.578 -66.057 1.00 55.22 C
ATOM 21 C6 U A2007 66.772 -8.368 -67.382 1.00 50.14 C
ATOM 22 P G A2008 66.389 -8.685 -73.915 1.00 52.81 P
ATOM 23 OP1 G A2008 65.979 -9.197 -75.250 1.00 58.74 O
ATOM 24 OP2 G A2008 67.708 -8.027 -73.760 1.00 55.15 O
ATOM 25 O5' G A2008 65.288 -7.630 -73.461 1.00 53.86 O
TER
ATOM 1 O3' A B2130 67.843 -4.204 -64.135 1.00 65.84 O
ATOM 2 P C B2131 67.842 -5.759 -63.672 1.00 62.07 P
ATOM 3 OP1 C B2131 69.152 -6.329 -64.056 1.00 53.73 O
ATOM 4 OP2 C B2131 66.594 -6.411 -64.130 1.00 60.28 O
ATOM 5 O5' C B2131 67.681 -5.740 -62.081 1.00 54.07 O
ATOM 6 C5' C B2131 68.403 -4.823 -61.266 1.00 56.20 C
ATOM 7 C4' C B2131 67.757 -4.703 -59.909 1.00 55.26 C
ATOM 8 O4' C B2131 66.440 -4.121 -60.057 1.00 52.57 O
ATOM 9 C3' C B2131 67.505 -6.000 -59.147 1.00 60.02 C
ATOM 10 O3' C B2131 68.677 -6.431 -58.455 1.00 65.19 O
ATOM 11 C2' C B2131 66.379 -5.586 -58.213 1.00 56.16 C
ATOM 12 O2' C B2131 66.884 -4.726 -57.212 1.00 60.27 O
ATOM 13 C1' C B2131 65.545 -4.690 -59.117 1.00 53.89 C
ATOM 14 N1 C B2131 64.448 -5.360 -59.851 1.00 52.28 N
ATOM 15 C2 C B2131 63.263 -5.751 -59.167 1.00 51.44 C
ATOM 16 O2 C B2131 63.170 -5.569 -57.951 1.00 45.78 O
ATOM 17 N3 C B2131 62.257 -6.321 -59.869 1.00 54.50 N
ATOM 18 C4 C B2131 62.395 -6.520 -61.188 1.00 53.11 C
ATOM 19 N4 C B2131 61.378 -7.080 -61.859 1.00 47.10 N
ATOM 20 C5 C B2131 63.586 -6.153 -61.887 1.00 54.30 C
ATOM 21 C6 C B2131 64.572 -5.589 -61.189 1.00 51.70 C
ATOM 22 P A B2132 68.761 -7.938 -57.879 1.00 59.73 P
ATOM 23 OP1 A B2132 70.100 -8.105 -57.238 1.00 73.30 O
ATOM 24 OP2 A B2132 68.298 -8.925 -58.913 1.00 45.13 O
ATOM 25 O5' A B2132 67.697 -7.939 -56.705 1.00 51.66 O
TER
ATOM 2 P U A2007 61.806 -11.890 -70.837 1.00 68.32 P
ATOM 3 OP1 U A2007 61.176 -11.710 -69.493 1.00 66.24 O
ATOM 4 OP2 U A2007 61.003 -11.652 -72.070 1.00 61.37 O
ATOM 5 O5' U A2007 63.117 -10.970 -70.902 1.00 55.19 O
ATOM 6 C5' U A2007 63.177 -9.822 -71.750 1.00 52.16 C
ATOM 7 C4' U A2007 64.432 -9.028 -71.475 1.00 49.44 C
ATOM 8 O4' U A2007 64.379 -8.482 -70.140 1.00 51.30 O
ATOM 9 C3' U A2007 65.752 -9.784 -71.543 1.00 52.45 C
ATOM 10 O3' U A2007 66.218 -9.950 -72.905 1.00 51.59 O
ATOM 11 C2' U A2007 66.681 -9.029 -70.585 1.00 52.92 C
ATOM 12 O2' U A2007 67.466 -8.030 -71.203 1.00 54.83 O
ATOM 13 C1' U A2007 65.690 -8.361 -69.624 1.00 53.16 C
ATOM 14 N1 U A2007 65.697 -8.692 -68.185 1.00 49.39 N
ATOM 15 C2 U A2007 64.565 -9.302 -67.635 1.00 56.89 C
ATOM 16 O2 U A2007 63.603 -9.656 -68.303 1.00 58.83 O
ATOM 17 N3 U A2007 64.603 -9.489 -66.272 1.00 56.13 N
ATOM 18 C4 U A2007 65.626 -9.162 -65.418 1.00 55.55 C
ATOM 19 O4 U A2007 65.478 -9.350 -64.205 1.00 51.56 O
ATOM 20 C5 U A2007 66.778 -8.578 -66.057 1.00 55.22 C
ATOM 21 C6 U A2007 66.772 -8.368 -67.382 1.00 50.14 C
ATOM 22 P G A2008 66.389 -8.685 -73.915 1.00 52.81 P
ATOM 23 OP1 G A2008 65.979 -9.197 -75.250 1.00 58.74 O
ATOM 24 OP2 G A2008 67.708 -8.027 -73.760 1.00 55.15 O
ATOM 25 O5' G A2008 65.288 -7.630 -73.461 1.00 53.86 O
TER
ATOM 1 O3' A B2130 67.843 -4.204 -64.135 1.00 65.84 O
ATOM 2 P C B2131 67.842 -5.759 -63.672 1.00 62.07 P
ATOM 3 OP1 C B2131 69.152 -6.329 -64.056 1.00 53.73 O
ATOM 4 OP2 C B2131 66.594 -6.411 -64.130 1.00 60.28 O
ATOM 5 O5' C B2131 67.681 -5.740 -62.081 1.00 54.07 O
ATOM 6 C5' C B2131 68.403 -4.823 -61.266 1.00 56.20 C
ATOM 7 C4' C B2131 67.757 -4.703 -59.909 1.00 55.26 C
ATOM 8 O4' C B2131 66.440 -4.121 -60.057 1.00 52.57 O
ATOM 9 C3' C B2131 67.505 -6.000 -59.147 1.00 60.02 C
ATOM 10 O3' C B2131 68.677 -6.431 -58.455 1.00 65.19 O
ATOM 11 C2' C B2131 66.379 -5.586 -58.213 1.00 56.16 C
ATOM 12 O2' C B2131 66.884 -4.726 -57.212 1.00 60.27 O
ATOM 13 C1' C B2131 65.545 -4.690 -59.117 1.00 53.89 C
ATOM 14 N1 C B2131 64.448 -5.360 -59.851 1.00 52.28 N
ATOM 15 C2 C B2131 63.263 -5.751 -59.167 1.00 51.44 C
ATOM 16 O2 C B2131 63.170 -5.569 -57.951 1.00 45.78 O
ATOM 17 N3 C B2131 62.257 -6.321 -59.869 1.00 54.50 N
ATOM 18 C4 C B2131 62.395 -6.520 -61.188 1.00 53.11 C
ATOM 19 N4 C B2131 61.378 -7.080 -61.859 1.00 47.10 N
ATOM 20 C5 C B2131 63.586 -6.153 -61.887 1.00 54.30 C
ATOM 21 C6 C B2131 64.572 -5.589 -61.189 1.00 51.70 C
ATOM 22 P A B2132 68.761 -7.938 -57.879 1.00 59.73 P
ATOM 23 OP1 A B2132 70.100 -8.105 -57.238 1.00 73.30 O
ATOM 24 OP2 A B2132 68.298 -8.925 -58.913 1.00 45.13 O
ATOM 25 O5' A B2132 67.697 -7.939 -56.705 1.00 51.66 O
TER
Atoms:
C4: (65.626,-9.162,-65.418)
N3: (64.603,-9.489,-66.272)
OP1: (61.176,-11.710,-69.493)
OP2: (61.003,-11.652,-72.070)
C2: (64.565,-9.302,-67.635)
C1': (65.690,-8.361,-69.624)
C3': (65.752,-9.784,-71.543)
O5': (63.117,-10.970,-70.902)
O4': (64.379,-8.482,-70.140)
C5': (63.177,-9.822,-71.750)
P: (61.806,-11.890,-70.837)
C4': (64.432,-9.028,-71.475)
C2': (66.681,-9.029,-70.585)
O2': (67.466,-8.030,-71.203)
N1: (65.697,-8.692,-68.185)
O4: (65.478,-9.350,-64.205)
O2: (63.603,-9.656,-68.303)
C6: (66.772,-8.368,-67.382)
C5: (66.778,-8.578,-66.057)
O3': (66.218,-9.950,-72.905)
N3: (64.603,-9.489,-66.272)
OP1: (61.176,-11.710,-69.493)
OP2: (61.003,-11.652,-72.070)
C2: (64.565,-9.302,-67.635)
C1': (65.690,-8.361,-69.624)
C3': (65.752,-9.784,-71.543)
O5': (63.117,-10.970,-70.902)
O4': (64.379,-8.482,-70.140)
C5': (63.177,-9.822,-71.750)
P: (61.806,-11.890,-70.837)
C4': (64.432,-9.028,-71.475)
C2': (66.681,-9.029,-70.585)
O2': (67.466,-8.030,-71.203)
N1: (65.697,-8.692,-68.185)
O4: (65.478,-9.350,-64.205)
O2: (63.603,-9.656,-68.303)
C6: (66.772,-8.368,-67.382)
C5: (66.778,-8.578,-66.057)
O3': (66.218,-9.950,-72.905)
C2: (63.263,-5.751,-59.167)
OP1: (69.152,-6.329,-64.056)
OP2: (66.594,-6.411,-64.130)
C4: (62.395,-6.520,-61.188)
O5': (67.681,-5.740,-62.081)
C3': (67.505,-6.000,-59.147)
C1': (65.545,-4.690,-59.117)
O4': (66.440,-4.121,-60.057)
C5': (68.403,-4.823,-61.266)
P: (67.842,-5.759,-63.672)
O2: (63.170,-5.569,-57.951)
C4': (67.757,-4.703,-59.909)
C2': (66.379,-5.586,-58.213)
O2': (66.884,-4.726,-57.212)
N1: (64.448,-5.360,-59.851)
N3: (62.257,-6.321,-59.869)
N4: (61.378,-7.080,-61.859)
C6: (64.572,-5.589,-61.189)
C5: (63.586,-6.153,-61.887)
O3': (68.677,-6.431,-58.455)
OP1: (69.152,-6.329,-64.056)
OP2: (66.594,-6.411,-64.130)
C4: (62.395,-6.520,-61.188)
O5': (67.681,-5.740,-62.081)
C3': (67.505,-6.000,-59.147)
C1': (65.545,-4.690,-59.117)
O4': (66.440,-4.121,-60.057)
C5': (68.403,-4.823,-61.266)
P: (67.842,-5.759,-63.672)
O2: (63.170,-5.569,-57.951)
C4': (67.757,-4.703,-59.909)
C2': (66.379,-5.586,-58.213)
O2': (66.884,-4.726,-57.212)
N1: (64.448,-5.360,-59.851)
N3: (62.257,-6.321,-59.869)
N4: (61.378,-7.080,-61.859)
C6: (64.572,-5.589,-61.189)
C5: (63.586,-6.153,-61.887)
O3': (68.677,-6.431,-58.455)
Image (generated by PyMOL):