Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11134:11242
Extra
PDB:
ATOM 1 O3' C A1133 33.811 12.992 6.859 1.00 54.29 O
ATOM 2 P A A1134 32.212 13.034 7.105 1.00 56.23 P
ATOM 3 OP1 A A1134 31.590 11.919 6.301 1.00 56.46 O
ATOM 4 OP2 A A1134 31.763 14.479 6.850 1.00 56.55 O
ATOM 5 O5' A A1134 32.111 12.683 8.674 1.00 55.63 O
ATOM 6 C5' A A1134 32.595 13.595 9.651 1.00 55.35 C
ATOM 7 C4' A A1134 32.123 13.241 11.025 1.00 54.87 C
ATOM 8 O4' A A1134 32.298 11.816 11.221 1.00 54.62 O
ATOM 9 C3' A A1134 32.890 13.930 12.150 1.00 54.50 C
ATOM 10 O3' A A1134 32.192 15.059 12.702 1.00 54.53 O
ATOM 11 C2' A A1134 33.167 12.826 13.168 1.00 54.00 C
ATOM 12 O2' A A1134 32.117 12.768 14.103 1.00 53.78 O
ATOM 13 C1' A A1134 33.112 11.555 12.322 1.00 54.14 C
ATOM 14 N9 A A1134 34.438 11.124 11.808 1.00 54.15 N
ATOM 15 C8 A A1134 34.619 9.897 11.212 1.00 54.21 C
ATOM 16 N7 A A1134 35.805 9.667 10.742 1.00 54.25 N
ATOM 17 C5 A A1134 36.490 10.842 11.042 1.00 54.21 C
ATOM 18 C6 A A1134 37.832 11.237 10.824 1.00 54.23 C
ATOM 19 N6 A A1134 38.743 10.473 10.218 1.00 54.30 N
ATOM 20 N1 A A1134 38.230 12.452 11.238 1.00 54.20 N
ATOM 21 C2 A A1134 37.333 13.230 11.824 1.00 54.16 C
ATOM 22 N3 A A1134 36.056 12.969 12.081 1.00 54.13 N
ATOM 23 C4 A A1134 35.666 11.751 11.674 1.00 54.16 C
ATOM 24 P U A1135 31.993 16.418 11.850 1.00 57.59 P
ATOM 25 OP1 U A1135 30.972 16.142 10.819 1.00 58.00 O
ATOM 26 OP2 U A1135 33.349 16.878 11.405 1.00 57.68 O
ATOM 27 O5' U A1135 31.394 17.427 12.909 1.00 57.44 O
TER
ATOM 1 O3' C B1241 33.043 7.255 11.981 1.00 42.58 O
ATOM 2 P C B1242 32.038 7.194 13.238 1.00 43.48 P
ATOM 3 OP1 C B1242 32.422 8.249 14.200 1.00 43.22 O
ATOM 4 OP2 C B1242 31.990 5.775 13.702 1.00 43.21 O
ATOM 5 O5' C B1242 30.682 7.600 12.584 1.00 43.86 O
ATOM 6 C5' C B1242 30.524 8.871 11.987 1.00 44.20 C
ATOM 7 C4' C B1242 29.115 9.027 11.515 1.00 44.52 C
ATOM 8 O4' C B1242 28.873 8.080 10.446 1.00 44.83 O
ATOM 9 C3' C B1242 28.069 8.671 12.535 1.00 44.25 C
ATOM 10 O3' C B1242 27.826 9.699 13.456 1.00 44.07 O
ATOM 11 C2' C B1242 26.886 8.330 11.666 1.00 44.65 C
ATOM 12 O2' C B1242 26.325 9.513 11.126 1.00 45.03 O
ATOM 13 C1' C B1242 27.568 7.576 10.539 1.00 44.90 C
ATOM 14 N1 C B1242 27.638 6.136 10.814 1.00 44.67 N
ATOM 15 C2 C B1242 26.548 5.360 10.502 1.00 44.85 C
ATOM 16 O2 C B1242 25.591 5.905 9.962 1.00 45.20 O
ATOM 17 N3 C B1242 26.557 4.042 10.769 1.00 44.66 N
ATOM 18 C4 C B1242 27.608 3.462 11.321 1.00 44.31 C
ATOM 19 N4 C B1242 27.551 2.166 11.544 1.00 44.16 N
ATOM 20 C5 C B1242 28.744 4.213 11.661 1.00 44.11 C
ATOM 21 C6 C B1242 28.714 5.526 11.379 1.00 44.31 C
ATOM 22 P U B1243 27.112 9.352 14.853 1.00 47.25 P
ATOM 23 OP1 U B1243 27.039 10.615 15.653 1.00 47.14 O
ATOM 24 OP2 U B1243 27.806 8.177 15.417 1.00 46.88 O
ATOM 25 O5' U B1243 25.656 8.910 14.404 1.00 47.53 O
TER
ATOM 2 P A A1134 32.212 13.034 7.105 1.00 56.23 P
ATOM 3 OP1 A A1134 31.590 11.919 6.301 1.00 56.46 O
ATOM 4 OP2 A A1134 31.763 14.479 6.850 1.00 56.55 O
ATOM 5 O5' A A1134 32.111 12.683 8.674 1.00 55.63 O
ATOM 6 C5' A A1134 32.595 13.595 9.651 1.00 55.35 C
ATOM 7 C4' A A1134 32.123 13.241 11.025 1.00 54.87 C
ATOM 8 O4' A A1134 32.298 11.816 11.221 1.00 54.62 O
ATOM 9 C3' A A1134 32.890 13.930 12.150 1.00 54.50 C
ATOM 10 O3' A A1134 32.192 15.059 12.702 1.00 54.53 O
ATOM 11 C2' A A1134 33.167 12.826 13.168 1.00 54.00 C
ATOM 12 O2' A A1134 32.117 12.768 14.103 1.00 53.78 O
ATOM 13 C1' A A1134 33.112 11.555 12.322 1.00 54.14 C
ATOM 14 N9 A A1134 34.438 11.124 11.808 1.00 54.15 N
ATOM 15 C8 A A1134 34.619 9.897 11.212 1.00 54.21 C
ATOM 16 N7 A A1134 35.805 9.667 10.742 1.00 54.25 N
ATOM 17 C5 A A1134 36.490 10.842 11.042 1.00 54.21 C
ATOM 18 C6 A A1134 37.832 11.237 10.824 1.00 54.23 C
ATOM 19 N6 A A1134 38.743 10.473 10.218 1.00 54.30 N
ATOM 20 N1 A A1134 38.230 12.452 11.238 1.00 54.20 N
ATOM 21 C2 A A1134 37.333 13.230 11.824 1.00 54.16 C
ATOM 22 N3 A A1134 36.056 12.969 12.081 1.00 54.13 N
ATOM 23 C4 A A1134 35.666 11.751 11.674 1.00 54.16 C
ATOM 24 P U A1135 31.993 16.418 11.850 1.00 57.59 P
ATOM 25 OP1 U A1135 30.972 16.142 10.819 1.00 58.00 O
ATOM 26 OP2 U A1135 33.349 16.878 11.405 1.00 57.68 O
ATOM 27 O5' U A1135 31.394 17.427 12.909 1.00 57.44 O
TER
ATOM 1 O3' C B1241 33.043 7.255 11.981 1.00 42.58 O
ATOM 2 P C B1242 32.038 7.194 13.238 1.00 43.48 P
ATOM 3 OP1 C B1242 32.422 8.249 14.200 1.00 43.22 O
ATOM 4 OP2 C B1242 31.990 5.775 13.702 1.00 43.21 O
ATOM 5 O5' C B1242 30.682 7.600 12.584 1.00 43.86 O
ATOM 6 C5' C B1242 30.524 8.871 11.987 1.00 44.20 C
ATOM 7 C4' C B1242 29.115 9.027 11.515 1.00 44.52 C
ATOM 8 O4' C B1242 28.873 8.080 10.446 1.00 44.83 O
ATOM 9 C3' C B1242 28.069 8.671 12.535 1.00 44.25 C
ATOM 10 O3' C B1242 27.826 9.699 13.456 1.00 44.07 O
ATOM 11 C2' C B1242 26.886 8.330 11.666 1.00 44.65 C
ATOM 12 O2' C B1242 26.325 9.513 11.126 1.00 45.03 O
ATOM 13 C1' C B1242 27.568 7.576 10.539 1.00 44.90 C
ATOM 14 N1 C B1242 27.638 6.136 10.814 1.00 44.67 N
ATOM 15 C2 C B1242 26.548 5.360 10.502 1.00 44.85 C
ATOM 16 O2 C B1242 25.591 5.905 9.962 1.00 45.20 O
ATOM 17 N3 C B1242 26.557 4.042 10.769 1.00 44.66 N
ATOM 18 C4 C B1242 27.608 3.462 11.321 1.00 44.31 C
ATOM 19 N4 C B1242 27.551 2.166 11.544 1.00 44.16 N
ATOM 20 C5 C B1242 28.744 4.213 11.661 1.00 44.11 C
ATOM 21 C6 C B1242 28.714 5.526 11.379 1.00 44.31 C
ATOM 22 P U B1243 27.112 9.352 14.853 1.00 47.25 P
ATOM 23 OP1 U B1243 27.039 10.615 15.653 1.00 47.14 O
ATOM 24 OP2 U B1243 27.806 8.177 15.417 1.00 46.88 O
ATOM 25 O5' U B1243 25.656 8.910 14.404 1.00 47.53 O
TER
Atoms:
OP1: (31.590,11.919,6.301)
OP2: (31.763,14.479,6.850)
C3': (32.890,13.930,12.150)
C1': (33.112,11.555,12.322)
C5': (32.595,13.595,9.651)
O4': (32.298,11.816,11.221)
C8: (34.619,9.897,11.212)
O2': (32.117,12.768,14.103)
C6: (37.832,11.237,10.824)
C5: (36.490,10.842,11.042)
C4: (35.666,11.751,11.674)
P: (32.212,13.034,7.105)
C4': (32.123,13.241,11.025)
C2': (33.167,12.826,13.168)
C2: (37.333,13.230,11.824)
N1: (38.230,12.452,11.238)
N3: (36.056,12.969,12.081)
N6: (38.743,10.473,10.218)
N7: (35.805,9.667,10.742)
N9: (34.438,11.124,11.808)
O5': (32.111,12.683,8.674)
O3': (32.192,15.059,12.702)
OP2: (31.763,14.479,6.850)
C3': (32.890,13.930,12.150)
C1': (33.112,11.555,12.322)
C5': (32.595,13.595,9.651)
O4': (32.298,11.816,11.221)
C8: (34.619,9.897,11.212)
O2': (32.117,12.768,14.103)
C6: (37.832,11.237,10.824)
C5: (36.490,10.842,11.042)
C4: (35.666,11.751,11.674)
P: (32.212,13.034,7.105)
C4': (32.123,13.241,11.025)
C2': (33.167,12.826,13.168)
C2: (37.333,13.230,11.824)
N1: (38.230,12.452,11.238)
N3: (36.056,12.969,12.081)
N6: (38.743,10.473,10.218)
N7: (35.805,9.667,10.742)
N9: (34.438,11.124,11.808)
O5': (32.111,12.683,8.674)
O3': (32.192,15.059,12.702)
C2: (26.548,5.360,10.502)
OP1: (32.422,8.249,14.200)
OP2: (31.990,5.775,13.702)
C4: (27.608,3.462,11.321)
O5': (30.682,7.600,12.584)
C3': (28.069,8.671,12.535)
C1': (27.568,7.576,10.539)
O4': (28.873,8.080,10.446)
C5': (30.524,8.871,11.987)
P: (32.038,7.194,13.238)
O2: (25.591,5.905,9.962)
C4': (29.115,9.027,11.515)
C2': (26.886,8.330,11.666)
O2': (26.325,9.513,11.126)
N1: (27.638,6.136,10.814)
N3: (26.557,4.042,10.769)
N4: (27.551,2.166,11.544)
C6: (28.714,5.526,11.379)
C5: (28.744,4.213,11.661)
O3': (27.826,9.699,13.456)
OP1: (32.422,8.249,14.200)
OP2: (31.990,5.775,13.702)
C4: (27.608,3.462,11.321)
O5': (30.682,7.600,12.584)
C3': (28.069,8.671,12.535)
C1': (27.568,7.576,10.539)
O4': (28.873,8.080,10.446)
C5': (30.524,8.871,11.987)
P: (32.038,7.194,13.238)
O2: (25.591,5.905,9.962)
C4': (29.115,9.027,11.515)
C2': (26.886,8.330,11.666)
O2': (26.325,9.513,11.126)
N1: (27.638,6.136,10.814)
N3: (26.557,4.042,10.769)
N4: (27.551,2.166,11.544)
C6: (28.714,5.526,11.379)
C5: (28.744,4.213,11.661)
O3': (27.826,9.699,13.456)
Image (generated by PyMOL):