Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11189:11216
Extra
PDB:
ATOM 1 O3' A A1188 -18.945 -4.054 -21.324 1.00319.71 O
ATOM 2 P A A1189 -18.743 -5.352 -22.253 1.00246.69 P
ATOM 3 OP1 A A1189 -20.086 -5.927 -22.494 1.00247.81 O
ATOM 4 OP2 A A1189 -17.715 -6.203 -21.604 1.00245.97 O
ATOM 5 O5' A A1189 -18.166 -4.735 -23.611 1.00246.16 O
ATOM 6 C5' A A1189 -17.221 -3.661 -23.599 1.00245.31 C
ATOM 7 C4' A A1189 -16.491 -3.542 -24.923 1.00244.71 C
ATOM 8 O4' A A1189 -17.299 -2.774 -25.857 1.00245.27 O
ATOM 9 C3' A A1189 -15.130 -2.843 -24.875 1.00243.57 C
ATOM 10 O3' A A1189 -14.266 -3.455 -25.847 1.00242.94 O
ATOM 11 C2' A A1189 -15.476 -1.417 -25.309 1.00243.71 C
ATOM 12 O2' A A1189 -14.393 -0.673 -25.830 1.00242.78 O
ATOM 13 C1' A A1189 -16.541 -1.687 -26.361 1.00244.56 C
ATOM 14 N9 A A1189 -17.450 -0.561 -26.616 1.00245.17 N
ATOM 15 C8 A A1189 -18.348 0.024 -25.753 1.00245.83 C
ATOM 16 N7 A A1189 -19.040 1.002 -26.291 1.00246.28 N
ATOM 17 C5 A A1189 -18.568 1.078 -27.599 1.00245.89 C
ATOM 18 C6 A A1189 -18.888 1.917 -28.690 1.00246.06 C
ATOM 19 N6 A A1189 -19.804 2.888 -28.646 1.00246.69 N
ATOM 20 N1 A A1189 -18.227 1.726 -29.852 1.00245.54 N
ATOM 21 C2 A A1189 -17.307 0.758 -29.916 1.00244.91 C
ATOM 22 N3 A A1189 -16.919 -0.089 -28.964 1.00244.69 N
ATOM 23 C4 A A1189 -17.593 0.118 -27.814 1.00245.21 C
ATOM 24 P G A1190 -12.675 -3.190 -25.830 1.00276.13 P
ATOM 25 OP1 G A1190 -12.450 -1.922 -25.106 1.00275.84 O
ATOM 26 OP2 G A1190 -12.203 -3.297 -27.235 1.00275.75 O
ATOM 27 O5' G A1190 -12.103 -4.414 -24.980 1.00275.80 O
TER
ATOM 1 O3' A B1215 -21.034 2.422 -21.122 1.00261.70 O
ATOM 2 P C B1216 -19.703 2.096 -21.982 1.00244.17 P
ATOM 3 OP1 C B1216 -19.702 0.633 -22.256 1.00244.30 O
ATOM 4 OP2 C B1216 -18.554 2.683 -21.252 1.00243.22 O
ATOM 5 O5' C B1216 -19.951 2.897 -23.337 1.00244.28 O
ATOM 6 C5' C B1216 -19.158 4.027 -23.684 1.00243.54 C
ATOM 7 C4' C B1216 -19.511 4.539 -25.059 1.00243.76 C
ATOM 8 O4' C B1216 -20.448 5.643 -24.953 1.00244.40 O
ATOM 9 C3' C B1216 -18.371 5.117 -25.878 1.00242.80 C
ATOM 10 O3' C B1216 -17.554 4.124 -26.478 1.00242.24 O
ATOM 11 C2' C B1216 -19.109 5.993 -26.883 1.00243.30 C
ATOM 12 O2' C B1216 -19.683 5.203 -27.915 1.00243.81 O
ATOM 13 C1' C B1216 -20.241 6.547 -26.019 1.00244.15 C
ATOM 14 N1 C B1216 -19.908 7.867 -25.461 1.00243.78 N
ATOM 15 C2 C B1216 -20.128 8.982 -26.269 1.00243.85 C
ATOM 16 O2 C B1216 -20.595 8.811 -27.404 1.00244.22 O
ATOM 17 N3 C B1216 -19.831 10.212 -25.795 1.00243.52 N
ATOM 18 C4 C B1216 -19.330 10.342 -24.567 1.00243.12 C
ATOM 19 N4 C B1216 -19.051 11.572 -24.136 1.00242.81 N
ATOM 20 C5 C B1216 -19.093 9.219 -23.727 1.00243.04 C
ATOM 21 C6 C B1216 -19.392 8.006 -24.205 1.00243.37 C
ATOM 22 P A B1217 -15.968 4.099 -26.201 1.00223.51 P
ATOM 23 OP1 A B1217 -15.377 3.104 -27.130 1.00223.12 O
ATOM 24 OP2 A B1217 -15.782 3.912 -24.741 1.00223.39 O
ATOM 25 O5' A B1217 -15.513 5.565 -26.620 1.00223.02 O
TER
ATOM 2 P A A1189 -18.743 -5.352 -22.253 1.00246.69 P
ATOM 3 OP1 A A1189 -20.086 -5.927 -22.494 1.00247.81 O
ATOM 4 OP2 A A1189 -17.715 -6.203 -21.604 1.00245.97 O
ATOM 5 O5' A A1189 -18.166 -4.735 -23.611 1.00246.16 O
ATOM 6 C5' A A1189 -17.221 -3.661 -23.599 1.00245.31 C
ATOM 7 C4' A A1189 -16.491 -3.542 -24.923 1.00244.71 C
ATOM 8 O4' A A1189 -17.299 -2.774 -25.857 1.00245.27 O
ATOM 9 C3' A A1189 -15.130 -2.843 -24.875 1.00243.57 C
ATOM 10 O3' A A1189 -14.266 -3.455 -25.847 1.00242.94 O
ATOM 11 C2' A A1189 -15.476 -1.417 -25.309 1.00243.71 C
ATOM 12 O2' A A1189 -14.393 -0.673 -25.830 1.00242.78 O
ATOM 13 C1' A A1189 -16.541 -1.687 -26.361 1.00244.56 C
ATOM 14 N9 A A1189 -17.450 -0.561 -26.616 1.00245.17 N
ATOM 15 C8 A A1189 -18.348 0.024 -25.753 1.00245.83 C
ATOM 16 N7 A A1189 -19.040 1.002 -26.291 1.00246.28 N
ATOM 17 C5 A A1189 -18.568 1.078 -27.599 1.00245.89 C
ATOM 18 C6 A A1189 -18.888 1.917 -28.690 1.00246.06 C
ATOM 19 N6 A A1189 -19.804 2.888 -28.646 1.00246.69 N
ATOM 20 N1 A A1189 -18.227 1.726 -29.852 1.00245.54 N
ATOM 21 C2 A A1189 -17.307 0.758 -29.916 1.00244.91 C
ATOM 22 N3 A A1189 -16.919 -0.089 -28.964 1.00244.69 N
ATOM 23 C4 A A1189 -17.593 0.118 -27.814 1.00245.21 C
ATOM 24 P G A1190 -12.675 -3.190 -25.830 1.00276.13 P
ATOM 25 OP1 G A1190 -12.450 -1.922 -25.106 1.00275.84 O
ATOM 26 OP2 G A1190 -12.203 -3.297 -27.235 1.00275.75 O
ATOM 27 O5' G A1190 -12.103 -4.414 -24.980 1.00275.80 O
TER
ATOM 1 O3' A B1215 -21.034 2.422 -21.122 1.00261.70 O
ATOM 2 P C B1216 -19.703 2.096 -21.982 1.00244.17 P
ATOM 3 OP1 C B1216 -19.702 0.633 -22.256 1.00244.30 O
ATOM 4 OP2 C B1216 -18.554 2.683 -21.252 1.00243.22 O
ATOM 5 O5' C B1216 -19.951 2.897 -23.337 1.00244.28 O
ATOM 6 C5' C B1216 -19.158 4.027 -23.684 1.00243.54 C
ATOM 7 C4' C B1216 -19.511 4.539 -25.059 1.00243.76 C
ATOM 8 O4' C B1216 -20.448 5.643 -24.953 1.00244.40 O
ATOM 9 C3' C B1216 -18.371 5.117 -25.878 1.00242.80 C
ATOM 10 O3' C B1216 -17.554 4.124 -26.478 1.00242.24 O
ATOM 11 C2' C B1216 -19.109 5.993 -26.883 1.00243.30 C
ATOM 12 O2' C B1216 -19.683 5.203 -27.915 1.00243.81 O
ATOM 13 C1' C B1216 -20.241 6.547 -26.019 1.00244.15 C
ATOM 14 N1 C B1216 -19.908 7.867 -25.461 1.00243.78 N
ATOM 15 C2 C B1216 -20.128 8.982 -26.269 1.00243.85 C
ATOM 16 O2 C B1216 -20.595 8.811 -27.404 1.00244.22 O
ATOM 17 N3 C B1216 -19.831 10.212 -25.795 1.00243.52 N
ATOM 18 C4 C B1216 -19.330 10.342 -24.567 1.00243.12 C
ATOM 19 N4 C B1216 -19.051 11.572 -24.136 1.00242.81 N
ATOM 20 C5 C B1216 -19.093 9.219 -23.727 1.00243.04 C
ATOM 21 C6 C B1216 -19.392 8.006 -24.205 1.00243.37 C
ATOM 22 P A B1217 -15.968 4.099 -26.201 1.00223.51 P
ATOM 23 OP1 A B1217 -15.377 3.104 -27.130 1.00223.12 O
ATOM 24 OP2 A B1217 -15.782 3.912 -24.741 1.00223.39 O
ATOM 25 O5' A B1217 -15.513 5.565 -26.620 1.00223.02 O
TER
Atoms:
OP1: (-20.086,-5.927,-22.494)
OP2: (-17.715,-6.203,-21.604)
C3': (-15.130,-2.843,-24.875)
C1': (-16.541,-1.687,-26.361)
C5': (-17.221,-3.661,-23.599)
O4': (-17.299,-2.774,-25.857)
C8: (-18.348,0.024,-25.753)
O2': (-14.393,-0.673,-25.830)
C6: (-18.888,1.917,-28.690)
C5: (-18.568,1.078,-27.599)
C4: (-17.593,0.118,-27.814)
P: (-18.743,-5.352,-22.253)
C4': (-16.491,-3.542,-24.923)
C2': (-15.476,-1.417,-25.309)
C2: (-17.307,0.758,-29.916)
N1: (-18.227,1.726,-29.852)
N3: (-16.919,-0.089,-28.964)
N6: (-19.804,2.888,-28.646)
N7: (-19.040,1.002,-26.291)
N9: (-17.450,-0.561,-26.616)
O5': (-18.166,-4.735,-23.611)
O3': (-14.266,-3.455,-25.847)
OP2: (-17.715,-6.203,-21.604)
C3': (-15.130,-2.843,-24.875)
C1': (-16.541,-1.687,-26.361)
C5': (-17.221,-3.661,-23.599)
O4': (-17.299,-2.774,-25.857)
C8: (-18.348,0.024,-25.753)
O2': (-14.393,-0.673,-25.830)
C6: (-18.888,1.917,-28.690)
C5: (-18.568,1.078,-27.599)
C4: (-17.593,0.118,-27.814)
P: (-18.743,-5.352,-22.253)
C4': (-16.491,-3.542,-24.923)
C2': (-15.476,-1.417,-25.309)
C2: (-17.307,0.758,-29.916)
N1: (-18.227,1.726,-29.852)
N3: (-16.919,-0.089,-28.964)
N6: (-19.804,2.888,-28.646)
N7: (-19.040,1.002,-26.291)
N9: (-17.450,-0.561,-26.616)
O5': (-18.166,-4.735,-23.611)
O3': (-14.266,-3.455,-25.847)
C2: (-20.128,8.982,-26.269)
OP1: (-19.702,0.633,-22.256)
OP2: (-18.554,2.683,-21.252)
C4: (-19.330,10.342,-24.567)
O5': (-19.951,2.897,-23.337)
C3': (-18.371,5.117,-25.878)
C1': (-20.241,6.547,-26.019)
O4': (-20.448,5.643,-24.953)
C5': (-19.158,4.027,-23.684)
P: (-19.703,2.096,-21.982)
O2: (-20.595,8.811,-27.404)
C4': (-19.511,4.539,-25.059)
C2': (-19.109,5.993,-26.883)
O2': (-19.683,5.203,-27.915)
N1: (-19.908,7.867,-25.461)
N3: (-19.831,10.212,-25.795)
N4: (-19.051,11.572,-24.136)
C6: (-19.392,8.006,-24.205)
C5: (-19.093,9.219,-23.727)
O3': (-17.554,4.124,-26.478)
OP1: (-19.702,0.633,-22.256)
OP2: (-18.554,2.683,-21.252)
C4: (-19.330,10.342,-24.567)
O5': (-19.951,2.897,-23.337)
C3': (-18.371,5.117,-25.878)
C1': (-20.241,6.547,-26.019)
O4': (-20.448,5.643,-24.953)
C5': (-19.158,4.027,-23.684)
P: (-19.703,2.096,-21.982)
O2: (-20.595,8.811,-27.404)
C4': (-19.511,4.539,-25.059)
C2': (-19.109,5.993,-26.883)
O2': (-19.683,5.203,-27.915)
N1: (-19.908,7.867,-25.461)
N3: (-19.831,10.212,-25.795)
N4: (-19.051,11.572,-24.136)
C6: (-19.392,8.006,-24.205)
C5: (-19.093,9.219,-23.727)
O3': (-17.554,4.124,-26.478)
Image (generated by PyMOL):