Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12551:1902
Extra
PDB:
ATOM 1 O3' C A2550 30.743 -40.997 66.651 1.00 43.03 O
ATOM 2 P A A2551 32.081 -40.291 66.185 1.00 41.95 P
ATOM 3 OP1 A A2551 31.888 -38.889 66.381 1.00 41.69 O
ATOM 4 OP2 A A2551 32.384 -40.775 64.818 1.00 42.06 O
ATOM 5 O5' A A2551 33.163 -40.882 67.204 1.00 42.02 O
ATOM 6 C5' A A2551 32.952 -40.922 68.610 1.00 42.03 C
ATOM 7 C4' A A2551 34.242 -40.611 69.332 1.00 41.94 C
ATOM 8 O4' A A2551 35.246 -41.583 68.930 1.00 42.11 O
ATOM 9 C3' A A2551 34.849 -39.226 69.023 1.00 41.66 C
ATOM 10 O3' A A2551 34.533 -38.255 70.006 1.00 41.50 O
ATOM 11 C2' A A2551 36.347 -39.474 68.975 1.00 41.68 C
ATOM 12 O2' A A2551 36.927 -39.270 70.269 1.00 41.65 O
ATOM 13 C1' A A2551 36.460 -40.952 68.610 1.00 41.96 C
ATOM 14 N9 A A2551 36.715 -41.131 67.174 1.00 41.99 N
ATOM 15 C8 A A2551 35.969 -40.579 66.194 1.00 41.90 C
ATOM 16 N7 A A2551 36.351 -40.866 64.988 1.00 41.97 N
ATOM 17 C5 A A2551 37.445 -41.648 65.181 1.00 42.11 C
ATOM 18 C6 A A2551 38.294 -42.254 64.243 1.00 42.25 C
ATOM 19 N6 A A2551 38.068 -42.092 62.947 1.00 42.25 N
ATOM 20 N1 A A2551 39.343 -42.995 64.685 1.00 42.39 N
ATOM 21 C2 A A2551 39.443 -43.071 66.017 1.00 42.38 C
ATOM 22 N3 A A2551 38.714 -42.540 67.019 1.00 42.27 N
ATOM 23 C4 A A2551 37.701 -41.824 66.526 1.00 42.13 C
ATOM 24 P G A2552 33.130 -37.505 70.039 1.00 41.04 P
ATOM 25 OP1 G A2552 32.938 -37.014 68.801 1.00 40.95 O
ATOM 26 OP2 G A2552 33.123 -36.577 71.113 1.00 40.89 O
ATOM 27 O5' G A2552 32.102 -38.674 70.360 1.00 41.28 O
TER
ATOM 1 O3' C B 901 36.977 -37.656 65.513 1.00 32.86 O
ATOM 2 P C B 902 35.822 -36.585 65.730 1.00 33.60 P
ATOM 3 OP1 C B 902 34.706 -37.300 66.355 1.00 33.75 O
ATOM 4 OP2 C B 902 35.625 -35.927 64.428 1.00 33.52 O
ATOM 5 O5' C B 902 36.469 -35.571 66.791 1.00 33.41 O
ATOM 6 C5' C B 902 36.589 -35.936 68.169 1.00 33.47 C
ATOM 7 C4' C B 902 37.344 -34.904 68.988 1.00 33.29 C
ATOM 8 O4' C B 902 38.563 -34.544 68.320 1.00 33.22 O
ATOM 9 C3' C B 902 36.669 -33.570 69.217 1.00 33.09 C
ATOM 10 O3' C B 902 35.660 -33.626 70.213 1.00 33.13 O
ATOM 11 C2' C B 902 37.853 -32.705 69.605 1.00 32.95 C
ATOM 12 O2' C B 902 38.231 -32.977 70.943 1.00 33.02 O
ATOM 13 C1' C B 902 38.940 -33.254 68.676 1.00 33.02 C
ATOM 14 N1 C B 902 39.064 -32.467 67.447 1.00 32.89 N
ATOM 15 C2 C B 902 39.743 -31.268 67.566 1.00 32.72 C
ATOM 16 O2 C B 902 40.229 -30.991 68.641 1.00 32.68 O
ATOM 17 N3 C B 902 39.885 -30.420 66.540 1.00 32.60 N
ATOM 18 C4 C B 902 39.357 -30.767 65.400 1.00 32.66 C
ATOM 19 N4 C B 902 39.596 -29.867 64.477 1.00 32.54 N
ATOM 20 C5 C B 902 38.632 -31.989 65.193 1.00 32.84 C
ATOM 21 C6 C B 902 38.511 -32.814 66.245 1.00 32.95 C
ATOM 22 P C B 903 34.311 -32.769 70.064 1.00 38.59 P
ATOM 23 OP1 C B 903 33.562 -32.962 71.241 1.00 38.66 O
ATOM 24 OP2 C B 903 33.709 -33.134 68.771 1.00 38.65 O
ATOM 25 O5' C B 903 34.766 -31.276 70.073 1.00 38.37 O
TER
ATOM 2 P A A2551 32.081 -40.291 66.185 1.00 41.95 P
ATOM 3 OP1 A A2551 31.888 -38.889 66.381 1.00 41.69 O
ATOM 4 OP2 A A2551 32.384 -40.775 64.818 1.00 42.06 O
ATOM 5 O5' A A2551 33.163 -40.882 67.204 1.00 42.02 O
ATOM 6 C5' A A2551 32.952 -40.922 68.610 1.00 42.03 C
ATOM 7 C4' A A2551 34.242 -40.611 69.332 1.00 41.94 C
ATOM 8 O4' A A2551 35.246 -41.583 68.930 1.00 42.11 O
ATOM 9 C3' A A2551 34.849 -39.226 69.023 1.00 41.66 C
ATOM 10 O3' A A2551 34.533 -38.255 70.006 1.00 41.50 O
ATOM 11 C2' A A2551 36.347 -39.474 68.975 1.00 41.68 C
ATOM 12 O2' A A2551 36.927 -39.270 70.269 1.00 41.65 O
ATOM 13 C1' A A2551 36.460 -40.952 68.610 1.00 41.96 C
ATOM 14 N9 A A2551 36.715 -41.131 67.174 1.00 41.99 N
ATOM 15 C8 A A2551 35.969 -40.579 66.194 1.00 41.90 C
ATOM 16 N7 A A2551 36.351 -40.866 64.988 1.00 41.97 N
ATOM 17 C5 A A2551 37.445 -41.648 65.181 1.00 42.11 C
ATOM 18 C6 A A2551 38.294 -42.254 64.243 1.00 42.25 C
ATOM 19 N6 A A2551 38.068 -42.092 62.947 1.00 42.25 N
ATOM 20 N1 A A2551 39.343 -42.995 64.685 1.00 42.39 N
ATOM 21 C2 A A2551 39.443 -43.071 66.017 1.00 42.38 C
ATOM 22 N3 A A2551 38.714 -42.540 67.019 1.00 42.27 N
ATOM 23 C4 A A2551 37.701 -41.824 66.526 1.00 42.13 C
ATOM 24 P G A2552 33.130 -37.505 70.039 1.00 41.04 P
ATOM 25 OP1 G A2552 32.938 -37.014 68.801 1.00 40.95 O
ATOM 26 OP2 G A2552 33.123 -36.577 71.113 1.00 40.89 O
ATOM 27 O5' G A2552 32.102 -38.674 70.360 1.00 41.28 O
TER
ATOM 1 O3' C B 901 36.977 -37.656 65.513 1.00 32.86 O
ATOM 2 P C B 902 35.822 -36.585 65.730 1.00 33.60 P
ATOM 3 OP1 C B 902 34.706 -37.300 66.355 1.00 33.75 O
ATOM 4 OP2 C B 902 35.625 -35.927 64.428 1.00 33.52 O
ATOM 5 O5' C B 902 36.469 -35.571 66.791 1.00 33.41 O
ATOM 6 C5' C B 902 36.589 -35.936 68.169 1.00 33.47 C
ATOM 7 C4' C B 902 37.344 -34.904 68.988 1.00 33.29 C
ATOM 8 O4' C B 902 38.563 -34.544 68.320 1.00 33.22 O
ATOM 9 C3' C B 902 36.669 -33.570 69.217 1.00 33.09 C
ATOM 10 O3' C B 902 35.660 -33.626 70.213 1.00 33.13 O
ATOM 11 C2' C B 902 37.853 -32.705 69.605 1.00 32.95 C
ATOM 12 O2' C B 902 38.231 -32.977 70.943 1.00 33.02 O
ATOM 13 C1' C B 902 38.940 -33.254 68.676 1.00 33.02 C
ATOM 14 N1 C B 902 39.064 -32.467 67.447 1.00 32.89 N
ATOM 15 C2 C B 902 39.743 -31.268 67.566 1.00 32.72 C
ATOM 16 O2 C B 902 40.229 -30.991 68.641 1.00 32.68 O
ATOM 17 N3 C B 902 39.885 -30.420 66.540 1.00 32.60 N
ATOM 18 C4 C B 902 39.357 -30.767 65.400 1.00 32.66 C
ATOM 19 N4 C B 902 39.596 -29.867 64.477 1.00 32.54 N
ATOM 20 C5 C B 902 38.632 -31.989 65.193 1.00 32.84 C
ATOM 21 C6 C B 902 38.511 -32.814 66.245 1.00 32.95 C
ATOM 22 P C B 903 34.311 -32.769 70.064 1.00 38.59 P
ATOM 23 OP1 C B 903 33.562 -32.962 71.241 1.00 38.66 O
ATOM 24 OP2 C B 903 33.709 -33.134 68.771 1.00 38.65 O
ATOM 25 O5' C B 903 34.766 -31.276 70.073 1.00 38.37 O
TER
Atoms:
OP1: (31.888,-38.889,66.381)
OP2: (32.384,-40.775,64.818)
C3': (34.849,-39.226,69.023)
C1': (36.460,-40.952,68.610)
C5': (32.952,-40.922,68.610)
O4': (35.246,-41.583,68.930)
C8: (35.969,-40.579,66.194)
O2': (36.927,-39.270,70.269)
C6: (38.294,-42.254,64.243)
C5: (37.445,-41.648,65.181)
C4: (37.701,-41.824,66.526)
P: (32.081,-40.291,66.185)
C4': (34.242,-40.611,69.332)
C2': (36.347,-39.474,68.975)
C2: (39.443,-43.071,66.017)
N1: (39.343,-42.995,64.685)
N3: (38.714,-42.540,67.019)
N6: (38.068,-42.092,62.947)
N7: (36.351,-40.866,64.988)
N9: (36.715,-41.131,67.174)
O5': (33.163,-40.882,67.204)
O3': (34.533,-38.255,70.006)
OP2: (32.384,-40.775,64.818)
C3': (34.849,-39.226,69.023)
C1': (36.460,-40.952,68.610)
C5': (32.952,-40.922,68.610)
O4': (35.246,-41.583,68.930)
C8: (35.969,-40.579,66.194)
O2': (36.927,-39.270,70.269)
C6: (38.294,-42.254,64.243)
C5: (37.445,-41.648,65.181)
C4: (37.701,-41.824,66.526)
P: (32.081,-40.291,66.185)
C4': (34.242,-40.611,69.332)
C2': (36.347,-39.474,68.975)
C2: (39.443,-43.071,66.017)
N1: (39.343,-42.995,64.685)
N3: (38.714,-42.540,67.019)
N6: (38.068,-42.092,62.947)
N7: (36.351,-40.866,64.988)
N9: (36.715,-41.131,67.174)
O5': (33.163,-40.882,67.204)
O3': (34.533,-38.255,70.006)
C2: (39.743,-31.268,67.566)
OP1: (34.706,-37.300,66.355)
OP2: (35.625,-35.927,64.428)
C4: (39.357,-30.767,65.400)
O5': (36.469,-35.571,66.791)
C3': (36.669,-33.570,69.217)
C1': (38.940,-33.254,68.676)
O4': (38.563,-34.544,68.320)
C5': (36.589,-35.936,68.169)
P: (35.822,-36.585,65.730)
O2: (40.229,-30.991,68.641)
C4': (37.344,-34.904,68.988)
C2': (37.853,-32.705,69.605)
O2': (38.231,-32.977,70.943)
N1: (39.064,-32.467,67.447)
N3: (39.885,-30.420,66.540)
N4: (39.596,-29.867,64.477)
C6: (38.511,-32.814,66.245)
C5: (38.632,-31.989,65.193)
O3': (35.660,-33.626,70.213)
OP1: (34.706,-37.300,66.355)
OP2: (35.625,-35.927,64.428)
C4: (39.357,-30.767,65.400)
O5': (36.469,-35.571,66.791)
C3': (36.669,-33.570,69.217)
C1': (38.940,-33.254,68.676)
O4': (38.563,-34.544,68.320)
C5': (36.589,-35.936,68.169)
P: (35.822,-36.585,65.730)
O2: (40.229,-30.991,68.641)
C4': (37.344,-34.904,68.988)
C2': (37.853,-32.705,69.605)
O2': (38.231,-32.977,70.943)
N1: (39.064,-32.467,67.447)
N3: (39.885,-30.420,66.540)
N4: (39.596,-29.867,64.477)
C6: (38.511,-32.814,66.245)
C5: (38.632,-31.989,65.193)
O3': (35.660,-33.626,70.213)
Image (generated by PyMOL):