Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A331:A327
Extra
PDB:
ATOM 1 O3' C A 330 -47.175-108.849 52.688 1.00 3.20 O
ATOM 2 P A A 331 -46.587-108.217 54.026 1.00 0.21 P
ATOM 3 OP1 A A 331 -47.707-108.058 54.959 1.00 0.21 O
ATOM 4 OP2 A A 331 -45.810-107.024 53.647 1.00 0.21 O
ATOM 5 O5' A A 331 -45.602-109.353 54.538 1.00 0.21 O
ATOM 6 C5' A A 331 -46.076-110.594 55.041 1.00 0.21 C
ATOM 7 C4' A A 331 -45.341-110.956 56.295 1.00 0.21 C
ATOM 8 O4' A A 331 -43.938-111.199 55.983 1.00 0.21 O
ATOM 9 C3' A A 331 -45.338-109.868 57.363 1.00 0.21 C
ATOM 10 O3' A A 331 -45.416-110.474 58.638 1.00 0.21 O
ATOM 11 C2' A A 331 -43.961-109.223 57.197 1.00 0.21 C
ATOM 12 O2' A A 331 -43.471-108.569 58.348 1.00 0.21 O
ATOM 13 C1' A A 331 -43.130-110.431 56.862 1.00 0.21 C
ATOM 14 N9 A A 331 -41.841-110.134 56.223 1.00 0.17 N
ATOM 15 C8 A A 331 -41.407-109.177 55.351 1.00 0.17 C
ATOM 16 N7 A A 331 -40.124-109.297 55.036 1.00 0.17 N
ATOM 17 C5 A A 331 -39.677-110.396 55.768 1.00 0.17 C
ATOM 18 C6 A A 331 -38.451-111.107 55.937 1.00 0.17 C
ATOM 19 N6 A A 331 -37.248-110.878 55.376 1.00 0.17 N
ATOM 20 N1 A A 331 -38.437-112.158 56.758 1.00 0.17 N
ATOM 21 C2 A A 331 -39.541-112.490 57.373 1.00 0.17 C
ATOM 22 N3 A A 331 -40.718-111.920 57.305 1.00 0.17 N
ATOM 23 C4 A A 331 -40.732-110.881 56.488 1.00 0.17 C
ATOM 24 P G A 332 -46.843-110.753 59.294 1.00 0.02 P
ATOM 25 OP1 G A 332 -47.052-112.245 59.283 1.00 0.02 O
ATOM 26 OP2 G A 332 -47.821-109.881 58.586 1.00 0.02 O
ATOM 27 O5' G A 332 -46.634-110.228 60.772 1.00 0.02 O
TER
ATOM 1 O3' G B 326 -38.311-100.466 50.573 1.00 15.55 O
ATOM 2 P U B 327 -38.490-101.598 49.467 1.00 0.01 P
ATOM 3 OP1 U B 327 -37.977-101.059 48.219 1.00 0.01 O
ATOM 4 OP2 U B 327 -39.896-102.062 49.525 1.00 0.01 O
ATOM 5 O5' U B 327 -37.541-102.741 49.996 1.00 0.01 O
ATOM 6 C5' U B 327 -36.162-102.524 50.155 1.00 0.01 C
ATOM 7 C4' U B 327 -35.520-103.695 50.834 1.00 0.01 C
ATOM 8 O4' U B 327 -36.148-103.904 52.109 1.00 0.01 O
ATOM 9 C3' U B 327 -35.659-105.037 50.136 1.00 0.01 C
ATOM 10 O3' U B 327 -34.717-105.207 49.086 1.00 0.01 O
ATOM 11 C2' U B 327 -35.472-106.006 51.279 1.00 0.01 C
ATOM 12 O2' U B 327 -34.098-106.163 51.562 1.00 0.01 O
ATOM 13 C1' U B 327 -36.139-105.258 52.431 1.00 0.01 C
ATOM 14 N1 U B 327 -37.508-105.658 52.607 1.00 0.09 N
ATOM 15 C2 U B 327 -37.792-106.877 53.197 1.00 0.09 C
ATOM 16 O2 U B 327 -36.900-107.640 53.590 1.00 0.09 O
ATOM 17 N3 U B 327 -39.147-107.145 53.297 1.00 0.09 N
ATOM 18 C4 U B 327 -40.164-106.311 52.869 1.00 0.09 C
ATOM 19 O4 U B 327 -41.348-106.635 52.978 1.00 0.09 O
ATOM 20 C5 U B 327 -39.737-105.083 52.281 1.00 0.09 C
ATOM 21 C6 U B 327 -38.456-104.801 52.171 1.00 0.09 C
ATOM 22 P G B 328 -34.362-106.655 48.496 1.00 0.01 P
ATOM 23 OP1 G B 328 -35.225-107.647 49.156 1.00 0.01 O
ATOM 24 OP2 G B 328 -32.912-106.796 48.598 1.00 0.01 O
ATOM 25 O5' G B 328 -34.776-106.516 46.999 1.00 0.01 O
TER
ATOM 2 P A A 331 -46.587-108.217 54.026 1.00 0.21 P
ATOM 3 OP1 A A 331 -47.707-108.058 54.959 1.00 0.21 O
ATOM 4 OP2 A A 331 -45.810-107.024 53.647 1.00 0.21 O
ATOM 5 O5' A A 331 -45.602-109.353 54.538 1.00 0.21 O
ATOM 6 C5' A A 331 -46.076-110.594 55.041 1.00 0.21 C
ATOM 7 C4' A A 331 -45.341-110.956 56.295 1.00 0.21 C
ATOM 8 O4' A A 331 -43.938-111.199 55.983 1.00 0.21 O
ATOM 9 C3' A A 331 -45.338-109.868 57.363 1.00 0.21 C
ATOM 10 O3' A A 331 -45.416-110.474 58.638 1.00 0.21 O
ATOM 11 C2' A A 331 -43.961-109.223 57.197 1.00 0.21 C
ATOM 12 O2' A A 331 -43.471-108.569 58.348 1.00 0.21 O
ATOM 13 C1' A A 331 -43.130-110.431 56.862 1.00 0.21 C
ATOM 14 N9 A A 331 -41.841-110.134 56.223 1.00 0.17 N
ATOM 15 C8 A A 331 -41.407-109.177 55.351 1.00 0.17 C
ATOM 16 N7 A A 331 -40.124-109.297 55.036 1.00 0.17 N
ATOM 17 C5 A A 331 -39.677-110.396 55.768 1.00 0.17 C
ATOM 18 C6 A A 331 -38.451-111.107 55.937 1.00 0.17 C
ATOM 19 N6 A A 331 -37.248-110.878 55.376 1.00 0.17 N
ATOM 20 N1 A A 331 -38.437-112.158 56.758 1.00 0.17 N
ATOM 21 C2 A A 331 -39.541-112.490 57.373 1.00 0.17 C
ATOM 22 N3 A A 331 -40.718-111.920 57.305 1.00 0.17 N
ATOM 23 C4 A A 331 -40.732-110.881 56.488 1.00 0.17 C
ATOM 24 P G A 332 -46.843-110.753 59.294 1.00 0.02 P
ATOM 25 OP1 G A 332 -47.052-112.245 59.283 1.00 0.02 O
ATOM 26 OP2 G A 332 -47.821-109.881 58.586 1.00 0.02 O
ATOM 27 O5' G A 332 -46.634-110.228 60.772 1.00 0.02 O
TER
ATOM 1 O3' G B 326 -38.311-100.466 50.573 1.00 15.55 O
ATOM 2 P U B 327 -38.490-101.598 49.467 1.00 0.01 P
ATOM 3 OP1 U B 327 -37.977-101.059 48.219 1.00 0.01 O
ATOM 4 OP2 U B 327 -39.896-102.062 49.525 1.00 0.01 O
ATOM 5 O5' U B 327 -37.541-102.741 49.996 1.00 0.01 O
ATOM 6 C5' U B 327 -36.162-102.524 50.155 1.00 0.01 C
ATOM 7 C4' U B 327 -35.520-103.695 50.834 1.00 0.01 C
ATOM 8 O4' U B 327 -36.148-103.904 52.109 1.00 0.01 O
ATOM 9 C3' U B 327 -35.659-105.037 50.136 1.00 0.01 C
ATOM 10 O3' U B 327 -34.717-105.207 49.086 1.00 0.01 O
ATOM 11 C2' U B 327 -35.472-106.006 51.279 1.00 0.01 C
ATOM 12 O2' U B 327 -34.098-106.163 51.562 1.00 0.01 O
ATOM 13 C1' U B 327 -36.139-105.258 52.431 1.00 0.01 C
ATOM 14 N1 U B 327 -37.508-105.658 52.607 1.00 0.09 N
ATOM 15 C2 U B 327 -37.792-106.877 53.197 1.00 0.09 C
ATOM 16 O2 U B 327 -36.900-107.640 53.590 1.00 0.09 O
ATOM 17 N3 U B 327 -39.147-107.145 53.297 1.00 0.09 N
ATOM 18 C4 U B 327 -40.164-106.311 52.869 1.00 0.09 C
ATOM 19 O4 U B 327 -41.348-106.635 52.978 1.00 0.09 O
ATOM 20 C5 U B 327 -39.737-105.083 52.281 1.00 0.09 C
ATOM 21 C6 U B 327 -38.456-104.801 52.171 1.00 0.09 C
ATOM 22 P G B 328 -34.362-106.655 48.496 1.00 0.01 P
ATOM 23 OP1 G B 328 -35.225-107.647 49.156 1.00 0.01 O
ATOM 24 OP2 G B 328 -32.912-106.796 48.598 1.00 0.01 O
ATOM 25 O5' G B 328 -34.776-106.516 46.999 1.00 0.01 O
TER
Atoms:
OP1: (-47.707,-108.058,54.959)
OP2: (-45.810,-107.024,53.647)
C3': (-45.338,-109.868,57.363)
C1': (-43.130,-110.431,56.862)
C5': (-46.076,-110.594,55.041)
O4': (-43.938,-111.199,55.983)
C8: (-41.407,-109.177,55.351)
O2': (-43.471,-108.569,58.348)
C6: (-38.451,-111.107,55.937)
C5: (-39.677,-110.396,55.768)
C4: (-40.732,-110.881,56.488)
P: (-46.587,-108.217,54.026)
C4': (-45.341,-110.956,56.295)
C2': (-43.961,-109.223,57.197)
C2: (-39.541,-112.490,57.373)
N1: (-38.437,-112.158,56.758)
N3: (-40.718,-111.920,57.305)
N6: (-37.248,-110.878,55.376)
N7: (-40.124,-109.297,55.036)
N9: (-41.841,-110.134,56.223)
O5': (-45.602,-109.353,54.538)
O3': (-45.416,-110.474,58.638)
OP2: (-45.810,-107.024,53.647)
C3': (-45.338,-109.868,57.363)
C1': (-43.130,-110.431,56.862)
C5': (-46.076,-110.594,55.041)
O4': (-43.938,-111.199,55.983)
C8: (-41.407,-109.177,55.351)
O2': (-43.471,-108.569,58.348)
C6: (-38.451,-111.107,55.937)
C5: (-39.677,-110.396,55.768)
C4: (-40.732,-110.881,56.488)
P: (-46.587,-108.217,54.026)
C4': (-45.341,-110.956,56.295)
C2': (-43.961,-109.223,57.197)
C2: (-39.541,-112.490,57.373)
N1: (-38.437,-112.158,56.758)
N3: (-40.718,-111.920,57.305)
N6: (-37.248,-110.878,55.376)
N7: (-40.124,-109.297,55.036)
N9: (-41.841,-110.134,56.223)
O5': (-45.602,-109.353,54.538)
O3': (-45.416,-110.474,58.638)
C4: (-40.164,-106.311,52.869)
N3: (-39.147,-107.145,53.297)
OP1: (-37.977,-101.059,48.219)
OP2: (-39.896,-102.062,49.525)
C2: (-37.792,-106.877,53.197)
C1': (-36.139,-105.258,52.431)
C3': (-35.659,-105.037,50.136)
O5': (-37.541,-102.741,49.996)
O4': (-36.148,-103.904,52.109)
C5': (-36.162,-102.524,50.155)
P: (-38.490,-101.598,49.467)
C4': (-35.520,-103.695,50.834)
C2': (-35.472,-106.006,51.279)
O2': (-34.098,-106.163,51.562)
N1: (-37.508,-105.658,52.607)
O4: (-41.348,-106.635,52.978)
O2: (-36.900,-107.640,53.590)
C6: (-38.456,-104.801,52.171)
C5: (-39.737,-105.083,52.281)
O3': (-34.717,-105.207,49.086)
N3: (-39.147,-107.145,53.297)
OP1: (-37.977,-101.059,48.219)
OP2: (-39.896,-102.062,49.525)
C2: (-37.792,-106.877,53.197)
C1': (-36.139,-105.258,52.431)
C3': (-35.659,-105.037,50.136)
O5': (-37.541,-102.741,49.996)
O4': (-36.148,-103.904,52.109)
C5': (-36.162,-102.524,50.155)
P: (-38.490,-101.598,49.467)
C4': (-35.520,-103.695,50.834)
C2': (-35.472,-106.006,51.279)
O2': (-34.098,-106.163,51.562)
N1: (-37.508,-105.658,52.607)
O4: (-41.348,-106.635,52.978)
O2: (-36.900,-107.640,53.590)
C6: (-38.456,-104.801,52.171)
C5: (-39.737,-105.083,52.281)
O3': (-34.717,-105.207,49.086)
Image (generated by PyMOL):