Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3Q3Z:A26:V25
Extra
PDB:
ATOM 1 O3' U A 25 1.311 0.804 -3.240 1.00 84.33 O
ATOM 2 P A A 26 2.230 1.388 -4.405 1.00 88.11 P
ATOM 3 OP1 A A 26 2.359 0.361 -5.464 1.00 86.57 O
ATOM 4 OP2 A A 26 3.445 1.941 -3.763 1.00 88.89 O
ATOM 5 O5' A A 26 1.328 2.586 -4.971 1.00 80.85 O
ATOM 6 C5' A A 26 1.880 3.879 -5.195 1.00 81.85 C
ATOM 7 C4' A A 26 0.888 4.989 -4.887 1.00 80.98 C
ATOM 8 O4' A A 26 -0.444 4.658 -5.362 1.00 78.94 O
ATOM 9 C3' A A 26 0.734 5.321 -3.403 1.00 81.08 C
ATOM 10 O3' A A 26 1.288 6.613 -3.110 1.00 82.65 O
ATOM 11 C2' A A 26 -0.778 5.290 -3.169 1.00 82.20 C
ATOM 12 O2' A A 26 -1.237 6.327 -2.320 1.00 85.65 O
ATOM 13 C1' A A 26 -1.339 5.426 -4.587 1.00 81.26 C
ATOM 14 N9 A A 26 -2.722 4.947 -4.708 1.00 81.40 N
ATOM 15 C8 A A 26 -3.151 3.652 -4.838 1.00 81.58 C
ATOM 16 N7 A A 26 -4.457 3.520 -4.897 1.00 76.72 N
ATOM 17 C5 A A 26 -4.923 4.821 -4.798 1.00 76.13 C
ATOM 18 C6 A A 26 -6.226 5.370 -4.794 1.00 77.88 C
ATOM 19 N6 A A 26 -7.336 4.631 -4.898 1.00 78.42 N
ATOM 20 N1 A A 26 -6.346 6.712 -4.674 1.00 75.01 N
ATOM 21 C2 A A 26 -5.230 7.449 -4.565 1.00 75.37 C
ATOM 22 N3 A A 26 -3.957 7.047 -4.555 1.00 74.77 N
ATOM 23 C4 A A 26 -3.869 5.711 -4.676 1.00 75.77 C
ATOM 24 P A A 27 2.857 6.839 -2.858 1.00 86.84 P
ATOM 25 OP1 A A 27 3.370 5.722 -2.037 1.00 81.20 O
ATOM 26 OP2 A A 27 3.036 8.231 -2.383 1.00 78.94 O
ATOM 27 O5' A A 27 3.483 6.678 -4.325 1.00 80.19 O
TER
ATOM 1 O3' U B 24 -8.726 -4.970 -0.318 1.00 84.83 O
ATOM 2 P U B 25 -8.905 -5.870 -1.642 1.00 94.93 P
ATOM 3 OP1 U B 25 -10.292 -6.388 -1.643 1.00 94.93 O
ATOM 4 OP2 U B 25 -7.779 -6.825 -1.742 1.00 90.47 O
ATOM 5 O5' U B 25 -8.720 -4.806 -2.823 1.00 92.25 O
ATOM 6 C5' U B 25 -9.734 -3.850 -3.118 1.00 90.66 C
ATOM 7 C4' U B 25 -9.727 -2.691 -2.134 1.00 83.66 C
ATOM 8 O4' U B 25 -8.450 -2.002 -2.170 1.00 80.09 O
ATOM 9 C3' U B 25 -10.746 -1.608 -2.441 1.00 84.81 C
ATOM 10 O3' U B 25 -11.096 -0.920 -1.242 1.00 79.38 O
ATOM 11 C2' U B 25 -9.976 -0.740 -3.432 1.00 83.94 C
ATOM 12 O2' U B 25 -10.528 0.552 -3.607 1.00 81.42 O
ATOM 13 C1' U B 25 -8.613 -0.707 -2.743 1.00 81.82 C
ATOM 14 N1 U B 25 -7.434 -0.372 -3.650 1.00 80.67 N
ATOM 15 C2 U B 25 -7.179 0.952 -3.983 1.00 76.74 C
ATOM 16 O2 U B 25 -7.852 1.888 -3.600 1.00 76.71 O
ATOM 17 N3 U B 25 -6.089 1.151 -4.796 1.00 78.05 N
ATOM 18 C4 U B 25 -5.240 0.184 -5.307 1.00 78.61 C
ATOM 19 O4 U B 25 -4.304 0.513 -6.029 1.00 80.55 O
ATOM 20 C5 U B 25 -5.558 -1.168 -4.923 1.00 79.57 C
ATOM 21 C6 U B 25 -6.615 -1.387 -4.127 1.00 79.67 C
ATOM 22 P A B 26 -12.553 -0.290 -1.031 1.00 87.22 P
ATOM 23 OP1 A B 26 -12.811 -0.271 0.425 1.00 81.19 O
ATOM 24 OP2 A B 26 -13.510 -0.965 -1.940 1.00 89.38 O
ATOM 25 O5' A B 26 -12.360 1.225 -1.513 1.00 84.12 O
TER
ATOM 2 P A A 26 2.230 1.388 -4.405 1.00 88.11 P
ATOM 3 OP1 A A 26 2.359 0.361 -5.464 1.00 86.57 O
ATOM 4 OP2 A A 26 3.445 1.941 -3.763 1.00 88.89 O
ATOM 5 O5' A A 26 1.328 2.586 -4.971 1.00 80.85 O
ATOM 6 C5' A A 26 1.880 3.879 -5.195 1.00 81.85 C
ATOM 7 C4' A A 26 0.888 4.989 -4.887 1.00 80.98 C
ATOM 8 O4' A A 26 -0.444 4.658 -5.362 1.00 78.94 O
ATOM 9 C3' A A 26 0.734 5.321 -3.403 1.00 81.08 C
ATOM 10 O3' A A 26 1.288 6.613 -3.110 1.00 82.65 O
ATOM 11 C2' A A 26 -0.778 5.290 -3.169 1.00 82.20 C
ATOM 12 O2' A A 26 -1.237 6.327 -2.320 1.00 85.65 O
ATOM 13 C1' A A 26 -1.339 5.426 -4.587 1.00 81.26 C
ATOM 14 N9 A A 26 -2.722 4.947 -4.708 1.00 81.40 N
ATOM 15 C8 A A 26 -3.151 3.652 -4.838 1.00 81.58 C
ATOM 16 N7 A A 26 -4.457 3.520 -4.897 1.00 76.72 N
ATOM 17 C5 A A 26 -4.923 4.821 -4.798 1.00 76.13 C
ATOM 18 C6 A A 26 -6.226 5.370 -4.794 1.00 77.88 C
ATOM 19 N6 A A 26 -7.336 4.631 -4.898 1.00 78.42 N
ATOM 20 N1 A A 26 -6.346 6.712 -4.674 1.00 75.01 N
ATOM 21 C2 A A 26 -5.230 7.449 -4.565 1.00 75.37 C
ATOM 22 N3 A A 26 -3.957 7.047 -4.555 1.00 74.77 N
ATOM 23 C4 A A 26 -3.869 5.711 -4.676 1.00 75.77 C
ATOM 24 P A A 27 2.857 6.839 -2.858 1.00 86.84 P
ATOM 25 OP1 A A 27 3.370 5.722 -2.037 1.00 81.20 O
ATOM 26 OP2 A A 27 3.036 8.231 -2.383 1.00 78.94 O
ATOM 27 O5' A A 27 3.483 6.678 -4.325 1.00 80.19 O
TER
ATOM 1 O3' U B 24 -8.726 -4.970 -0.318 1.00 84.83 O
ATOM 2 P U B 25 -8.905 -5.870 -1.642 1.00 94.93 P
ATOM 3 OP1 U B 25 -10.292 -6.388 -1.643 1.00 94.93 O
ATOM 4 OP2 U B 25 -7.779 -6.825 -1.742 1.00 90.47 O
ATOM 5 O5' U B 25 -8.720 -4.806 -2.823 1.00 92.25 O
ATOM 6 C5' U B 25 -9.734 -3.850 -3.118 1.00 90.66 C
ATOM 7 C4' U B 25 -9.727 -2.691 -2.134 1.00 83.66 C
ATOM 8 O4' U B 25 -8.450 -2.002 -2.170 1.00 80.09 O
ATOM 9 C3' U B 25 -10.746 -1.608 -2.441 1.00 84.81 C
ATOM 10 O3' U B 25 -11.096 -0.920 -1.242 1.00 79.38 O
ATOM 11 C2' U B 25 -9.976 -0.740 -3.432 1.00 83.94 C
ATOM 12 O2' U B 25 -10.528 0.552 -3.607 1.00 81.42 O
ATOM 13 C1' U B 25 -8.613 -0.707 -2.743 1.00 81.82 C
ATOM 14 N1 U B 25 -7.434 -0.372 -3.650 1.00 80.67 N
ATOM 15 C2 U B 25 -7.179 0.952 -3.983 1.00 76.74 C
ATOM 16 O2 U B 25 -7.852 1.888 -3.600 1.00 76.71 O
ATOM 17 N3 U B 25 -6.089 1.151 -4.796 1.00 78.05 N
ATOM 18 C4 U B 25 -5.240 0.184 -5.307 1.00 78.61 C
ATOM 19 O4 U B 25 -4.304 0.513 -6.029 1.00 80.55 O
ATOM 20 C5 U B 25 -5.558 -1.168 -4.923 1.00 79.57 C
ATOM 21 C6 U B 25 -6.615 -1.387 -4.127 1.00 79.67 C
ATOM 22 P A B 26 -12.553 -0.290 -1.031 1.00 87.22 P
ATOM 23 OP1 A B 26 -12.811 -0.271 0.425 1.00 81.19 O
ATOM 24 OP2 A B 26 -13.510 -0.965 -1.940 1.00 89.38 O
ATOM 25 O5' A B 26 -12.360 1.225 -1.513 1.00 84.12 O
TER
Atoms:
OP1: (2.359,0.361,-5.464)
OP2: (3.445,1.941,-3.763)
C3': (0.734,5.321,-3.403)
C1': (-1.339,5.426,-4.587)
C5': (1.880,3.879,-5.195)
O4': (-0.444,4.658,-5.362)
C8: (-3.151,3.652,-4.838)
O2': (-1.237,6.327,-2.320)
C6: (-6.226,5.370,-4.794)
C5: (-4.923,4.821,-4.798)
C4: (-3.869,5.711,-4.676)
P: (2.230,1.388,-4.405)
C4': (0.888,4.989,-4.887)
C2': (-0.778,5.290,-3.169)
C2: (-5.230,7.449,-4.565)
N1: (-6.346,6.712,-4.674)
N3: (-3.957,7.047,-4.555)
N6: (-7.336,4.631,-4.898)
N7: (-4.457,3.520,-4.897)
N9: (-2.722,4.947,-4.708)
O5': (1.328,2.586,-4.971)
O3': (1.288,6.613,-3.110)
OP2: (3.445,1.941,-3.763)
C3': (0.734,5.321,-3.403)
C1': (-1.339,5.426,-4.587)
C5': (1.880,3.879,-5.195)
O4': (-0.444,4.658,-5.362)
C8: (-3.151,3.652,-4.838)
O2': (-1.237,6.327,-2.320)
C6: (-6.226,5.370,-4.794)
C5: (-4.923,4.821,-4.798)
C4: (-3.869,5.711,-4.676)
P: (2.230,1.388,-4.405)
C4': (0.888,4.989,-4.887)
C2': (-0.778,5.290,-3.169)
C2: (-5.230,7.449,-4.565)
N1: (-6.346,6.712,-4.674)
N3: (-3.957,7.047,-4.555)
N6: (-7.336,4.631,-4.898)
N7: (-4.457,3.520,-4.897)
N9: (-2.722,4.947,-4.708)
O5': (1.328,2.586,-4.971)
O3': (1.288,6.613,-3.110)
C4: (-5.240,0.184,-5.307)
N3: (-6.089,1.151,-4.796)
OP1: (-10.292,-6.388,-1.643)
OP2: (-7.779,-6.825,-1.742)
C2: (-7.179,0.952,-3.983)
C1': (-8.613,-0.707,-2.743)
C3': (-10.746,-1.608,-2.441)
O5': (-8.720,-4.806,-2.823)
O4': (-8.450,-2.002,-2.170)
C5': (-9.734,-3.850,-3.118)
P: (-8.905,-5.870,-1.642)
C4': (-9.727,-2.691,-2.134)
C2': (-9.976,-0.740,-3.432)
O2': (-10.528,0.552,-3.607)
N1: (-7.434,-0.372,-3.650)
O4: (-4.304,0.513,-6.029)
O2: (-7.852,1.888,-3.600)
C6: (-6.615,-1.387,-4.127)
C5: (-5.558,-1.168,-4.923)
O3': (-11.096,-0.920,-1.242)
N3: (-6.089,1.151,-4.796)
OP1: (-10.292,-6.388,-1.643)
OP2: (-7.779,-6.825,-1.742)
C2: (-7.179,0.952,-3.983)
C1': (-8.613,-0.707,-2.743)
C3': (-10.746,-1.608,-2.441)
O5': (-8.720,-4.806,-2.823)
O4': (-8.450,-2.002,-2.170)
C5': (-9.734,-3.850,-3.118)
P: (-8.905,-5.870,-1.642)
C4': (-9.727,-2.691,-2.134)
C2': (-9.976,-0.740,-3.432)
O2': (-10.528,0.552,-3.607)
N1: (-7.434,-0.372,-3.650)
O4: (-4.304,0.513,-6.029)
O2: (-7.852,1.888,-3.600)
C6: (-6.615,-1.387,-4.127)
C5: (-5.558,-1.168,-4.923)
O3': (-11.096,-0.920,-1.242)
Image (generated by PyMOL):