Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0301:01274
Extra
PDB:
ATOM 1 O3' U A 300 -3.695 144.614 49.091 1.00 64.87 O
ATOM 2 P U A 301 -2.781 145.800 49.666 1.00 66.93 P
ATOM 3 OP1 U A 301 -3.436 146.359 50.882 1.00 65.94 O
ATOM 4 OP2 U A 301 -2.450 146.705 48.531 1.00 66.02 O
ATOM 5 O5' U A 301 -1.451 145.044 50.111 1.00 66.38 O
ATOM 6 C5' U A 301 -1.488 144.034 51.141 1.00 63.40 C
ATOM 7 C4' U A 301 -0.105 143.488 51.394 1.00 61.40 C
ATOM 8 O4' U A 301 0.327 142.680 50.264 1.00 61.77 O
ATOM 9 C3' U A 301 0.999 144.523 51.538 1.00 59.96 C
ATOM 10 O3' U A 301 1.030 145.121 52.827 1.00 57.55 O
ATOM 11 C2' U A 301 2.242 143.695 51.245 1.00 59.69 C
ATOM 12 O2' U A 301 2.607 142.891 52.345 1.00 58.37 O
ATOM 13 C1' U A 301 1.737 142.795 50.113 1.00 59.90 C
ATOM 14 N1 U A 301 2.035 143.334 48.775 1.00 59.75 N
ATOM 15 C2 U A 301 3.223 142.947 48.181 1.00 60.17 C
ATOM 16 O2 U A 301 4.013 142.188 48.715 1.00 60.91 O
ATOM 17 N3 U A 301 3.455 143.484 46.936 1.00 60.17 N
ATOM 18 C4 U A 301 2.644 144.356 46.236 1.00 58.87 C
ATOM 19 O4 U A 301 3.007 144.770 45.131 1.00 55.83 O
ATOM 20 C5 U A 301 1.432 144.710 46.912 1.00 59.11 C
ATOM 21 C6 U A 301 1.174 144.199 48.126 1.00 59.99 C
ATOM 22 P G A 302 1.488 146.652 52.974 1.00 57.35 P
ATOM 23 OP1 G A 302 1.469 146.998 54.410 1.00 57.05 O
ATOM 24 OP2 G A 302 0.714 147.475 52.013 1.00 58.24 O
ATOM 25 O5' G A 302 3.002 146.642 52.487 1.00 57.71 O
TER
ATOM 1 O3' U B1273 6.749 140.241 53.057 1.00 45.61 O
ATOM 2 P G B1274 5.177 140.422 52.745 1.00 45.17 P
ATOM 3 OP1 G B1274 4.863 139.772 51.452 1.00 43.44 O
ATOM 4 OP2 G B1274 4.883 141.858 52.941 1.00 44.79 O
ATOM 5 O5' G B1274 4.430 139.604 53.889 1.00 44.98 O
ATOM 6 C5' G B1274 4.589 139.943 55.281 1.00 46.22 C
ATOM 7 C4' G B1274 3.839 138.947 56.139 1.00 49.83 C
ATOM 8 O4' G B1274 2.425 139.024 55.804 1.00 52.24 O
ATOM 9 C3' G B1274 4.237 137.483 55.938 1.00 48.90 C
ATOM 10 O3' G B1274 3.946 136.719 57.109 1.00 45.69 O
ATOM 11 C2' G B1274 3.260 137.037 54.861 1.00 50.83 C
ATOM 12 O2' G B1274 3.052 135.641 54.857 1.00 50.46 O
ATOM 13 C1' G B1274 1.996 137.777 55.302 1.00 54.24 C
ATOM 14 N9 G B1274 1.025 138.014 54.239 1.00 57.86 N
ATOM 15 C8 G B1274 1.255 138.555 52.994 1.00 58.46 C
ATOM 16 N7 G B1274 0.184 138.592 52.249 1.00 60.10 N
ATOM 17 C5 G B1274 -0.814 138.055 53.054 1.00 59.03 C
ATOM 18 C6 G B1274 -2.182 137.826 52.787 1.00 58.62 C
ATOM 19 O6 G B1274 -2.809 138.044 51.742 1.00 60.02 O
ATOM 20 N1 G B1274 -2.831 137.273 53.886 1.00 58.47 N
ATOM 21 C2 G B1274 -2.238 136.968 55.086 1.00 57.73 C
ATOM 22 N2 G B1274 -3.032 136.437 56.027 1.00 56.11 N
ATOM 23 N3 G B1274 -0.962 137.167 55.343 1.00 58.62 N
ATOM 24 C4 G B1274 -0.313 137.708 54.289 1.00 58.59 C
ATOM 25 P G B1275 4.886 136.828 58.405 1.00 44.00 P
ATOM 26 OP1 G B1275 4.648 135.593 59.194 1.00 43.14 O
ATOM 27 OP2 G B1275 4.688 138.150 59.039 1.00 42.81 O
ATOM 28 O5' G B1275 6.363 136.800 57.826 1.00 43.26 O
TER
ATOM 2 P U A 301 -2.781 145.800 49.666 1.00 66.93 P
ATOM 3 OP1 U A 301 -3.436 146.359 50.882 1.00 65.94 O
ATOM 4 OP2 U A 301 -2.450 146.705 48.531 1.00 66.02 O
ATOM 5 O5' U A 301 -1.451 145.044 50.111 1.00 66.38 O
ATOM 6 C5' U A 301 -1.488 144.034 51.141 1.00 63.40 C
ATOM 7 C4' U A 301 -0.105 143.488 51.394 1.00 61.40 C
ATOM 8 O4' U A 301 0.327 142.680 50.264 1.00 61.77 O
ATOM 9 C3' U A 301 0.999 144.523 51.538 1.00 59.96 C
ATOM 10 O3' U A 301 1.030 145.121 52.827 1.00 57.55 O
ATOM 11 C2' U A 301 2.242 143.695 51.245 1.00 59.69 C
ATOM 12 O2' U A 301 2.607 142.891 52.345 1.00 58.37 O
ATOM 13 C1' U A 301 1.737 142.795 50.113 1.00 59.90 C
ATOM 14 N1 U A 301 2.035 143.334 48.775 1.00 59.75 N
ATOM 15 C2 U A 301 3.223 142.947 48.181 1.00 60.17 C
ATOM 16 O2 U A 301 4.013 142.188 48.715 1.00 60.91 O
ATOM 17 N3 U A 301 3.455 143.484 46.936 1.00 60.17 N
ATOM 18 C4 U A 301 2.644 144.356 46.236 1.00 58.87 C
ATOM 19 O4 U A 301 3.007 144.770 45.131 1.00 55.83 O
ATOM 20 C5 U A 301 1.432 144.710 46.912 1.00 59.11 C
ATOM 21 C6 U A 301 1.174 144.199 48.126 1.00 59.99 C
ATOM 22 P G A 302 1.488 146.652 52.974 1.00 57.35 P
ATOM 23 OP1 G A 302 1.469 146.998 54.410 1.00 57.05 O
ATOM 24 OP2 G A 302 0.714 147.475 52.013 1.00 58.24 O
ATOM 25 O5' G A 302 3.002 146.642 52.487 1.00 57.71 O
TER
ATOM 1 O3' U B1273 6.749 140.241 53.057 1.00 45.61 O
ATOM 2 P G B1274 5.177 140.422 52.745 1.00 45.17 P
ATOM 3 OP1 G B1274 4.863 139.772 51.452 1.00 43.44 O
ATOM 4 OP2 G B1274 4.883 141.858 52.941 1.00 44.79 O
ATOM 5 O5' G B1274 4.430 139.604 53.889 1.00 44.98 O
ATOM 6 C5' G B1274 4.589 139.943 55.281 1.00 46.22 C
ATOM 7 C4' G B1274 3.839 138.947 56.139 1.00 49.83 C
ATOM 8 O4' G B1274 2.425 139.024 55.804 1.00 52.24 O
ATOM 9 C3' G B1274 4.237 137.483 55.938 1.00 48.90 C
ATOM 10 O3' G B1274 3.946 136.719 57.109 1.00 45.69 O
ATOM 11 C2' G B1274 3.260 137.037 54.861 1.00 50.83 C
ATOM 12 O2' G B1274 3.052 135.641 54.857 1.00 50.46 O
ATOM 13 C1' G B1274 1.996 137.777 55.302 1.00 54.24 C
ATOM 14 N9 G B1274 1.025 138.014 54.239 1.00 57.86 N
ATOM 15 C8 G B1274 1.255 138.555 52.994 1.00 58.46 C
ATOM 16 N7 G B1274 0.184 138.592 52.249 1.00 60.10 N
ATOM 17 C5 G B1274 -0.814 138.055 53.054 1.00 59.03 C
ATOM 18 C6 G B1274 -2.182 137.826 52.787 1.00 58.62 C
ATOM 19 O6 G B1274 -2.809 138.044 51.742 1.00 60.02 O
ATOM 20 N1 G B1274 -2.831 137.273 53.886 1.00 58.47 N
ATOM 21 C2 G B1274 -2.238 136.968 55.086 1.00 57.73 C
ATOM 22 N2 G B1274 -3.032 136.437 56.027 1.00 56.11 N
ATOM 23 N3 G B1274 -0.962 137.167 55.343 1.00 58.62 N
ATOM 24 C4 G B1274 -0.313 137.708 54.289 1.00 58.59 C
ATOM 25 P G B1275 4.886 136.828 58.405 1.00 44.00 P
ATOM 26 OP1 G B1275 4.648 135.593 59.194 1.00 43.14 O
ATOM 27 OP2 G B1275 4.688 138.150 59.039 1.00 42.81 O
ATOM 28 O5' G B1275 6.363 136.800 57.826 1.00 43.26 O
TER
Atoms:
C4: (2.644,144.356,46.236)
N3: (3.455,143.484,46.936)
OP1: (-3.436,146.359,50.882)
OP2: (-2.450,146.705,48.531)
C2: (3.223,142.947,48.181)
C1': (1.737,142.795,50.113)
C3': (0.999,144.523,51.538)
O5': (-1.451,145.044,50.111)
O4': (0.327,142.680,50.264)
C5': (-1.488,144.034,51.141)
P: (-2.781,145.800,49.666)
C4': (-0.105,143.488,51.394)
C2': (2.242,143.695,51.245)
O2': (2.607,142.891,52.345)
N1: (2.035,143.334,48.775)
O4: (3.007,144.770,45.131)
O2: (4.013,142.188,48.715)
C6: (1.174,144.199,48.126)
C5: (1.432,144.710,46.912)
O3': (1.030,145.121,52.827)
N3: (3.455,143.484,46.936)
OP1: (-3.436,146.359,50.882)
OP2: (-2.450,146.705,48.531)
C2: (3.223,142.947,48.181)
C1': (1.737,142.795,50.113)
C3': (0.999,144.523,51.538)
O5': (-1.451,145.044,50.111)
O4': (0.327,142.680,50.264)
C5': (-1.488,144.034,51.141)
P: (-2.781,145.800,49.666)
C4': (-0.105,143.488,51.394)
C2': (2.242,143.695,51.245)
O2': (2.607,142.891,52.345)
N1: (2.035,143.334,48.775)
O4: (3.007,144.770,45.131)
O2: (4.013,142.188,48.715)
C6: (1.174,144.199,48.126)
C5: (1.432,144.710,46.912)
O3': (1.030,145.121,52.827)
OP1: (4.863,139.772,51.452)
OP2: (4.883,141.858,52.941)
C3': (4.237,137.483,55.938)
C1': (1.996,137.777,55.302)
C5': (4.589,139.943,55.281)
O6: (-2.809,138.044,51.742)
O4': (2.425,139.024,55.804)
C8: (1.255,138.555,52.994)
C2: (-2.238,136.968,55.086)
C6: (-2.182,137.826,52.787)
C5: (-0.814,138.055,53.054)
C4: (-0.313,137.708,54.289)
P: (5.177,140.422,52.745)
C4': (3.839,138.947,56.139)
C2': (3.260,137.037,54.861)
O2': (3.052,135.641,54.857)
N1: (-2.831,137.273,53.886)
N2: (-3.032,136.437,56.027)
N3: (-0.962,137.167,55.343)
N7: (0.184,138.592,52.249)
N9: (1.025,138.014,54.239)
O5': (4.430,139.604,53.889)
O3': (3.946,136.719,57.109)
OP2: (4.883,141.858,52.941)
C3': (4.237,137.483,55.938)
C1': (1.996,137.777,55.302)
C5': (4.589,139.943,55.281)
O6: (-2.809,138.044,51.742)
O4': (2.425,139.024,55.804)
C8: (1.255,138.555,52.994)
C2: (-2.238,136.968,55.086)
C6: (-2.182,137.826,52.787)
C5: (-0.814,138.055,53.054)
C4: (-0.313,137.708,54.289)
P: (5.177,140.422,52.745)
C4': (3.839,138.947,56.139)
C2': (3.260,137.037,54.861)
O2': (3.052,135.641,54.857)
N1: (-2.831,137.273,53.886)
N2: (-3.032,136.437,56.027)
N3: (-0.962,137.167,55.343)
N7: (0.184,138.592,52.249)
N9: (1.025,138.014,54.239)
O5': (4.430,139.604,53.889)
O3': (3.946,136.719,57.109)
Image (generated by PyMOL):