Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0301:01274
Extra
PDB:
ATOM 1 O3' U A 300 -3.610 144.738 49.045 1.00 68.83 O
ATOM 2 P U A 301 -2.665 145.921 49.571 1.00 70.50 P
ATOM 3 OP1 U A 301 -3.310 146.567 50.745 1.00 69.71 O
ATOM 4 OP2 U A 301 -2.285 146.750 48.392 1.00 69.66 O
ATOM 5 O5' U A 301 -1.366 145.144 50.070 1.00 70.62 O
ATOM 6 C5' U A 301 -1.460 144.135 51.103 1.00 68.69 C
ATOM 7 C4' U A 301 -0.097 143.558 51.407 1.00 66.14 C
ATOM 8 O4' U A 301 0.329 142.674 50.335 1.00 66.24 O
ATOM 9 C3' U A 301 1.031 144.568 51.519 1.00 63.90 C
ATOM 10 O3' U A 301 1.057 145.228 52.776 1.00 60.06 O
ATOM 11 C2' U A 301 2.258 143.703 51.276 1.00 64.50 C
ATOM 12 O2' U A 301 2.626 142.962 52.417 1.00 63.88 O
ATOM 13 C1' U A 301 1.741 142.754 50.192 1.00 65.79 C
ATOM 14 N1 U A 301 2.055 143.231 48.836 1.00 66.89 N
ATOM 15 C2 U A 301 3.291 142.903 48.316 1.00 66.90 C
ATOM 16 O2 U A 301 4.105 142.235 48.927 1.00 67.61 O
ATOM 17 N3 U A 301 3.540 143.388 47.055 1.00 67.12 N
ATOM 18 C4 U A 301 2.698 144.153 46.274 1.00 67.27 C
ATOM 19 O4 U A 301 3.073 144.530 45.160 1.00 65.95 O
ATOM 20 C5 U A 301 1.435 144.447 46.878 1.00 67.96 C
ATOM 21 C6 U A 301 1.162 143.986 48.106 1.00 67.88 C
ATOM 22 P G A 302 1.468 146.775 52.837 1.00 58.75 P
ATOM 23 OP1 G A 302 1.407 147.233 54.240 1.00 58.79 O
ATOM 24 OP2 G A 302 0.688 147.491 51.801 1.00 59.07 O
ATOM 25 O5' G A 302 2.997 146.768 52.400 1.00 59.37 O
TER
ATOM 1 O3' U B1273 6.847 140.277 53.047 1.00 50.38 O
ATOM 2 P G B1274 5.278 140.435 52.744 1.00 50.78 P
ATOM 3 OP1 G B1274 4.998 139.810 51.426 1.00 50.68 O
ATOM 4 OP2 G B1274 4.922 141.857 52.977 1.00 51.68 O
ATOM 5 O5' G B1274 4.568 139.560 53.864 1.00 50.83 O
ATOM 6 C5' G B1274 4.690 139.899 55.254 1.00 53.78 C
ATOM 7 C4' G B1274 3.910 138.914 56.087 1.00 55.83 C
ATOM 8 O4' G B1274 2.512 139.015 55.708 1.00 59.45 O
ATOM 9 C3' G B1274 4.295 137.448 55.887 1.00 54.27 C
ATOM 10 O3' G B1274 3.988 136.701 57.059 1.00 50.79 O
ATOM 11 C2' G B1274 3.335 137.012 54.792 1.00 56.83 C
ATOM 12 O2' G B1274 3.105 135.619 54.793 1.00 55.55 O
ATOM 13 C1' G B1274 2.073 137.776 55.195 1.00 60.87 C
ATOM 14 N9 G B1274 1.141 138.037 54.102 1.00 64.63 N
ATOM 15 C8 G B1274 1.418 138.622 52.888 1.00 65.76 C
ATOM 16 N7 G B1274 0.379 138.680 52.100 1.00 67.79 N
ATOM 17 C5 G B1274 -0.646 138.107 52.841 1.00 66.82 C
ATOM 18 C6 G B1274 -1.999 137.879 52.505 1.00 66.49 C
ATOM 19 O6 G B1274 -2.579 138.127 51.440 1.00 66.68 O
ATOM 20 N1 G B1274 -2.693 137.290 53.559 1.00 66.27 N
ATOM 21 C2 G B1274 -2.151 136.953 54.775 1.00 65.65 C
ATOM 22 N2 G B1274 -2.985 136.409 55.672 1.00 65.10 N
ATOM 23 N3 G B1274 -0.885 137.141 55.091 1.00 65.60 N
ATOM 24 C4 G B1274 -0.195 137.720 54.085 1.00 65.76 C
ATOM 25 P G B1275 4.960 136.760 58.330 1.00 47.62 P
ATOM 26 OP1 G B1275 4.809 135.459 59.026 1.00 46.33 O
ATOM 27 OP2 G B1275 4.708 138.025 59.064 1.00 45.47 O
ATOM 28 O5' G B1275 6.417 136.830 57.705 1.00 47.93 O
TER
ATOM 2 P U A 301 -2.665 145.921 49.571 1.00 70.50 P
ATOM 3 OP1 U A 301 -3.310 146.567 50.745 1.00 69.71 O
ATOM 4 OP2 U A 301 -2.285 146.750 48.392 1.00 69.66 O
ATOM 5 O5' U A 301 -1.366 145.144 50.070 1.00 70.62 O
ATOM 6 C5' U A 301 -1.460 144.135 51.103 1.00 68.69 C
ATOM 7 C4' U A 301 -0.097 143.558 51.407 1.00 66.14 C
ATOM 8 O4' U A 301 0.329 142.674 50.335 1.00 66.24 O
ATOM 9 C3' U A 301 1.031 144.568 51.519 1.00 63.90 C
ATOM 10 O3' U A 301 1.057 145.228 52.776 1.00 60.06 O
ATOM 11 C2' U A 301 2.258 143.703 51.276 1.00 64.50 C
ATOM 12 O2' U A 301 2.626 142.962 52.417 1.00 63.88 O
ATOM 13 C1' U A 301 1.741 142.754 50.192 1.00 65.79 C
ATOM 14 N1 U A 301 2.055 143.231 48.836 1.00 66.89 N
ATOM 15 C2 U A 301 3.291 142.903 48.316 1.00 66.90 C
ATOM 16 O2 U A 301 4.105 142.235 48.927 1.00 67.61 O
ATOM 17 N3 U A 301 3.540 143.388 47.055 1.00 67.12 N
ATOM 18 C4 U A 301 2.698 144.153 46.274 1.00 67.27 C
ATOM 19 O4 U A 301 3.073 144.530 45.160 1.00 65.95 O
ATOM 20 C5 U A 301 1.435 144.447 46.878 1.00 67.96 C
ATOM 21 C6 U A 301 1.162 143.986 48.106 1.00 67.88 C
ATOM 22 P G A 302 1.468 146.775 52.837 1.00 58.75 P
ATOM 23 OP1 G A 302 1.407 147.233 54.240 1.00 58.79 O
ATOM 24 OP2 G A 302 0.688 147.491 51.801 1.00 59.07 O
ATOM 25 O5' G A 302 2.997 146.768 52.400 1.00 59.37 O
TER
ATOM 1 O3' U B1273 6.847 140.277 53.047 1.00 50.38 O
ATOM 2 P G B1274 5.278 140.435 52.744 1.00 50.78 P
ATOM 3 OP1 G B1274 4.998 139.810 51.426 1.00 50.68 O
ATOM 4 OP2 G B1274 4.922 141.857 52.977 1.00 51.68 O
ATOM 5 O5' G B1274 4.568 139.560 53.864 1.00 50.83 O
ATOM 6 C5' G B1274 4.690 139.899 55.254 1.00 53.78 C
ATOM 7 C4' G B1274 3.910 138.914 56.087 1.00 55.83 C
ATOM 8 O4' G B1274 2.512 139.015 55.708 1.00 59.45 O
ATOM 9 C3' G B1274 4.295 137.448 55.887 1.00 54.27 C
ATOM 10 O3' G B1274 3.988 136.701 57.059 1.00 50.79 O
ATOM 11 C2' G B1274 3.335 137.012 54.792 1.00 56.83 C
ATOM 12 O2' G B1274 3.105 135.619 54.793 1.00 55.55 O
ATOM 13 C1' G B1274 2.073 137.776 55.195 1.00 60.87 C
ATOM 14 N9 G B1274 1.141 138.037 54.102 1.00 64.63 N
ATOM 15 C8 G B1274 1.418 138.622 52.888 1.00 65.76 C
ATOM 16 N7 G B1274 0.379 138.680 52.100 1.00 67.79 N
ATOM 17 C5 G B1274 -0.646 138.107 52.841 1.00 66.82 C
ATOM 18 C6 G B1274 -1.999 137.879 52.505 1.00 66.49 C
ATOM 19 O6 G B1274 -2.579 138.127 51.440 1.00 66.68 O
ATOM 20 N1 G B1274 -2.693 137.290 53.559 1.00 66.27 N
ATOM 21 C2 G B1274 -2.151 136.953 54.775 1.00 65.65 C
ATOM 22 N2 G B1274 -2.985 136.409 55.672 1.00 65.10 N
ATOM 23 N3 G B1274 -0.885 137.141 55.091 1.00 65.60 N
ATOM 24 C4 G B1274 -0.195 137.720 54.085 1.00 65.76 C
ATOM 25 P G B1275 4.960 136.760 58.330 1.00 47.62 P
ATOM 26 OP1 G B1275 4.809 135.459 59.026 1.00 46.33 O
ATOM 27 OP2 G B1275 4.708 138.025 59.064 1.00 45.47 O
ATOM 28 O5' G B1275 6.417 136.830 57.705 1.00 47.93 O
TER
Atoms:
C4: (2.698,144.153,46.274)
N3: (3.540,143.388,47.055)
OP1: (-3.310,146.567,50.745)
OP2: (-2.285,146.750,48.392)
C2: (3.291,142.903,48.316)
C1': (1.741,142.754,50.192)
C3': (1.031,144.568,51.519)
O5': (-1.366,145.144,50.070)
O4': (0.329,142.674,50.335)
C5': (-1.460,144.135,51.103)
P: (-2.665,145.921,49.571)
C4': (-0.097,143.558,51.407)
C2': (2.258,143.703,51.276)
O2': (2.626,142.962,52.417)
N1: (2.055,143.231,48.836)
O4: (3.073,144.530,45.160)
O2: (4.105,142.235,48.927)
C6: (1.162,143.986,48.106)
C5: (1.435,144.447,46.878)
O3': (1.057,145.228,52.776)
N3: (3.540,143.388,47.055)
OP1: (-3.310,146.567,50.745)
OP2: (-2.285,146.750,48.392)
C2: (3.291,142.903,48.316)
C1': (1.741,142.754,50.192)
C3': (1.031,144.568,51.519)
O5': (-1.366,145.144,50.070)
O4': (0.329,142.674,50.335)
C5': (-1.460,144.135,51.103)
P: (-2.665,145.921,49.571)
C4': (-0.097,143.558,51.407)
C2': (2.258,143.703,51.276)
O2': (2.626,142.962,52.417)
N1: (2.055,143.231,48.836)
O4: (3.073,144.530,45.160)
O2: (4.105,142.235,48.927)
C6: (1.162,143.986,48.106)
C5: (1.435,144.447,46.878)
O3': (1.057,145.228,52.776)
OP1: (4.998,139.810,51.426)
OP2: (4.922,141.857,52.977)
C3': (4.295,137.448,55.887)
C1': (2.073,137.776,55.195)
C5': (4.690,139.899,55.254)
O6: (-2.579,138.127,51.440)
O4': (2.512,139.015,55.708)
C8: (1.418,138.622,52.888)
C2: (-2.151,136.953,54.775)
C6: (-1.999,137.879,52.505)
C5: (-0.646,138.107,52.841)
C4: (-0.195,137.720,54.085)
P: (5.278,140.435,52.744)
C4': (3.910,138.914,56.087)
C2': (3.335,137.012,54.792)
O2': (3.105,135.619,54.793)
N1: (-2.693,137.290,53.559)
N2: (-2.985,136.409,55.672)
N3: (-0.885,137.141,55.091)
N7: (0.379,138.680,52.100)
N9: (1.141,138.037,54.102)
O5': (4.568,139.560,53.864)
O3': (3.988,136.701,57.059)
OP2: (4.922,141.857,52.977)
C3': (4.295,137.448,55.887)
C1': (2.073,137.776,55.195)
C5': (4.690,139.899,55.254)
O6: (-2.579,138.127,51.440)
O4': (2.512,139.015,55.708)
C8: (1.418,138.622,52.888)
C2: (-2.151,136.953,54.775)
C6: (-1.999,137.879,52.505)
C5: (-0.646,138.107,52.841)
C4: (-0.195,137.720,54.085)
P: (5.278,140.435,52.744)
C4': (3.910,138.914,56.087)
C2': (3.335,137.012,54.792)
O2': (3.105,135.619,54.793)
N1: (-2.693,137.290,53.559)
N2: (-2.985,136.409,55.672)
N3: (-0.885,137.141,55.091)
N7: (0.379,138.680,52.100)
N9: (1.141,138.037,54.102)
O5': (4.568,139.560,53.864)
O3': (3.988,136.701,57.059)
Image (generated by PyMOL):