ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTJ:0229:0258

Extra

PDB:
ATOM 1 O3' C A 228 83.833 113.220 6.111 1.00 55.55 O
ATOM 2 P A A 229 85.080 112.952 5.128 1.00 55.82 P
ATOM 3 OP1 A A 229 85.761 114.258 4.933 1.00 55.49 O
ATOM 4 OP2 A A 229 84.581 112.202 3.944 1.00 56.22 O
ATOM 5 O5' A A 229 86.042 112.016 5.983 1.00 54.99 O
ATOM 6 C5' A A 229 86.644 112.507 7.181 1.00 53.95 C
ATOM 7 C4' A A 229 87.341 111.390 7.912 1.00 53.82 C
ATOM 8 O4' A A 229 86.377 110.434 8.408 1.00 54.05 O
ATOM 9 C3' A A 229 88.221 110.506 7.059 1.00 54.29 C
ATOM 10 O3' A A 229 89.442 111.133 6.745 1.00 55.07 O
ATOM 11 C2' A A 229 88.414 109.301 7.962 1.00 53.88 C
ATOM 12 O2' A A 229 89.370 109.555 8.967 1.00 53.47 O
ATOM 13 C1' A A 229 87.028 109.190 8.596 1.00 54.10 C
ATOM 14 N9 A A 229 86.207 108.133 8.011 1.00 54.35 N
ATOM 15 C8 A A 229 85.210 108.216 7.069 1.00 54.59 C
ATOM 16 N7 A A 229 84.669 107.058 6.769 1.00 55.20 N
ATOM 17 C5 A A 229 85.361 106.152 7.565 1.00 55.27 C
ATOM 18 C6 A A 229 85.277 104.751 7.712 1.00 55.61 C
ATOM 19 N6 A A 229 84.433 103.977 7.023 1.00 56.61 N
ATOM 20 N1 A A 229 86.109 104.163 8.599 1.00 56.13 N
ATOM 21 C2 A A 229 86.970 104.929 9.279 1.00 55.31 C
ATOM 22 N3 A A 229 87.152 106.244 9.223 1.00 55.42 N
ATOM 23 C4 A A 229 86.306 106.802 8.336 1.00 55.26 C
ATOM 24 P A A 230 89.878 111.246 5.212 1.00 55.60 P
ATOM 25 OP1 A A 230 91.100 112.093 5.147 1.00 55.30 O
ATOM 26 OP2 A A 230 88.665 111.628 4.431 1.00 55.08 O
ATOM 27 O5' A A 230 90.267 109.751 4.833 1.00 53.94 O
TER

ATOM 1 O3' G B 257 79.099 104.001 -0.315 1.00 59.06 O
ATOM 2 P U B 258 77.649 103.986 0.381 1.00 60.41 P
ATOM 3 OP1 U B 258 76.914 102.769 -0.048 1.00 60.79 O
ATOM 4 OP2 U B 258 77.035 105.325 0.150 1.00 61.27 O
ATOM 5 O5' U B 258 77.997 103.826 1.929 1.00 61.49 O
ATOM 6 C5' U B 258 78.722 102.673 2.402 1.00 64.02 C
ATOM 7 C4' U B 258 78.957 102.766 3.894 1.00 65.95 C
ATOM 8 O4' U B 258 80.036 103.707 4.182 1.00 64.58 O
ATOM 9 C3' U B 258 77.758 103.220 4.728 1.00 67.58 C
ATOM 10 O3' U B 258 77.744 102.531 5.987 1.00 72.15 O
ATOM 11 C2' U B 258 78.067 104.700 4.948 1.00 65.87 C
ATOM 12 O2' U B 258 77.414 105.238 6.082 1.00 65.58 O
ATOM 13 C1' U B 258 79.584 104.646 5.132 1.00 64.02 C
ATOM 14 N1 U B 258 80.330 105.905 4.971 1.00 62.11 N
ATOM 15 C2 U B 258 81.670 105.895 5.326 1.00 61.17 C
ATOM 16 O2 U B 258 82.248 104.889 5.686 1.00 60.27 O
ATOM 17 N3 U B 258 82.306 107.109 5.239 1.00 60.80 N
ATOM 18 C4 U B 258 81.755 108.310 4.833 1.00 60.70 C
ATOM 19 O4 U B 258 82.429 109.341 4.914 1.00 60.91 O
ATOM 20 C5 U B 258 80.376 108.233 4.441 1.00 60.13 C
ATOM 21 C6 U B 258 79.728 107.062 4.519 1.00 61.19 C
ATOM 22 P C B 259 76.364 101.909 6.553 1.00 75.49 P
ATOM 23 OP1 C B 259 75.273 102.920 6.444 1.00 74.91 O
ATOM 24 OP2 C B 259 76.680 101.307 7.877 1.00 75.15 O
ATOM 25 O5' C B 259 76.023 100.711 5.556 1.00 77.94 O
TER

Atoms:
OP1: (85.761,114.258,4.933)
OP2: (84.581,112.202,3.944)
C3': (88.221,110.506,7.059)
C1': (87.028,109.190,8.596)
C5': (86.644,112.507,7.181)
O4': (86.377,110.434,8.408)
C8: (85.210,108.216,7.069)
O2': (89.370,109.555,8.967)
C6: (85.277,104.751,7.712)
C5: (85.361,106.152,7.565)
C4: (86.306,106.802,8.336)
P: (85.080,112.952,5.128)
C4': (87.341,111.390,7.912)
C2': (88.414,109.301,7.962)
C2: (86.970,104.929,9.279)
N1: (86.109,104.163,8.599)
N3: (87.152,106.244,9.223)
N6: (84.433,103.977,7.023)
N7: (84.669,107.058,6.769)
N9: (86.207,108.133,8.011)
O5': (86.042,112.016,5.983)
O3': (89.442,111.133,6.745)
C4: (81.755,108.310,4.833)
N3: (82.306,107.109,5.239)
OP1: (76.914,102.769,-0.048)
OP2: (77.035,105.325,0.150)
C2: (81.670,105.895,5.326)
C1': (79.584,104.646,5.132)
C3': (77.758,103.220,4.728)
O5': (77.997,103.826,1.929)
O4': (80.036,103.707,4.182)
C5': (78.722,102.673,2.402)
P: (77.649,103.986,0.381)
C4': (78.957,102.766,3.894)
C2': (78.067,104.700,4.948)
O2': (77.414,105.238,6.082)
N1: (80.330,105.905,4.971)
O4: (82.429,109.341,4.914)
O2: (82.248,104.889,5.686)
C6: (79.728,107.062,4.519)
C5: (80.376,108.233,4.441)
O3': (77.744,102.531,5.987)
Image (generated by PyMOL):
PyMOL image
show in jmol