ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2210:A2176

Extra

PDB:
ATOM 1 O3' A A2209 73.537 37.678 92.406 1.00 58.34 O
ATOM 2 P A A2210 73.057 38.814 91.354 1.00 57.82 P
ATOM 3 OP1 A A2210 71.840 38.298 90.668 1.00 57.89 O
ATOM 4 OP2 A A2210 74.259 39.153 90.552 1.00 58.23 O
ATOM 5 O5' A A2210 72.724 40.105 92.235 1.00 56.38 O
ATOM 6 C5' A A2210 71.429 40.742 92.182 1.00 53.82 C
ATOM 7 C4' A A2210 71.572 42.239 92.005 1.00 52.61 C
ATOM 8 O4' A A2210 72.010 42.877 93.243 1.00 52.51 O
ATOM 9 C3' A A2210 72.552 42.682 90.933 1.00 51.98 C
ATOM 10 O3' A A2210 72.007 43.788 90.243 1.00 53.27 O
ATOM 11 C2' A A2210 73.786 43.079 91.739 1.00 50.83 C
ATOM 12 O2' A A2210 74.596 44.035 91.092 1.00 49.63 O
ATOM 13 C1' A A2210 73.158 43.660 92.998 1.00 51.14 C
ATOM 14 N9 A A2210 74.049 43.577 94.155 1.00 51.99 N
ATOM 15 C8 A A2210 74.672 42.476 94.689 1.00 52.89 C
ATOM 16 N7 A A2210 75.442 42.748 95.716 1.00 54.41 N
ATOM 17 C5 A A2210 75.316 44.122 95.870 1.00 53.79 C
ATOM 18 C6 A A2210 75.886 45.040 96.788 1.00 54.59 C
ATOM 19 N6 A A2210 76.753 44.697 97.743 1.00 54.30 N
ATOM 20 N1 A A2210 75.530 46.338 96.680 1.00 53.86 N
ATOM 21 C2 A A2210 74.670 46.682 95.713 1.00 54.32 C
ATOM 22 N3 A A2210 74.080 45.922 94.791 1.00 54.11 N
ATOM 23 C4 A A2210 74.449 44.640 94.923 1.00 53.28 C
ATOM 24 P A A2211 72.665 44.268 88.862 1.00 52.49 P
ATOM 25 OP1 A A2211 71.544 44.374 87.908 1.00 50.00 O
ATOM 26 OP2 A A2211 73.822 43.389 88.557 1.00 52.61 O
ATOM 27 O5' A A2211 73.229 45.714 89.214 1.00 54.59 O
TER

ATOM 1 O3' C B2175 80.802 34.341 97.935 1.00 67.65 O
ATOM 2 P U B2176 79.815 34.718 99.147 1.00 68.25 P
ATOM 3 OP1 U B2176 80.350 34.106 100.388 1.00 68.85 O
ATOM 4 OP2 U B2176 78.448 34.365 98.681 1.00 69.41 O
ATOM 5 O5' U B2176 79.933 36.301 99.305 1.00 68.20 O
ATOM 6 C5' U B2176 81.176 36.918 99.719 1.00 67.82 C
ATOM 7 C4' U B2176 80.937 38.344 100.179 1.00 67.29 C
ATOM 8 O4' U B2176 80.394 39.131 99.087 1.00 65.77 O
ATOM 9 C3' U B2176 79.959 38.521 101.336 1.00 67.36 C
ATOM 10 O3' U B2176 80.320 39.686 102.036 1.00 66.20 O
ATOM 11 C2' U B2176 78.646 38.806 100.633 1.00 66.85 C
ATOM 12 O2' U B2176 77.773 39.543 101.471 1.00 68.02 O
ATOM 13 C1' U B2176 79.134 39.646 99.453 1.00 65.51 C
ATOM 14 N1 U B2176 78.268 39.595 98.271 1.00 64.09 N
ATOM 15 C2 U B2176 77.789 40.791 97.792 1.00 62.97 C
ATOM 16 O2 U B2176 78.102 41.869 98.275 1.00 62.76 O
ATOM 17 N3 U B2176 76.944 40.686 96.719 1.00 61.73 N
ATOM 18 C4 U B2176 76.557 39.532 96.079 1.00 61.98 C
ATOM 19 O4 U B2176 75.804 39.605 95.113 1.00 60.78 O
ATOM 20 C5 U B2176 77.121 38.331 96.617 1.00 63.37 C
ATOM 21 C6 U B2176 77.937 38.403 97.671 1.00 64.04 C
ATOM 22 P C B2177 81.500 39.622 103.099 1.00 66.94 P
ATOM 23 OP1 C B2177 82.457 38.569 102.658 1.00 66.35 O
ATOM 24 OP2 C B2177 80.851 39.525 104.440 1.00 66.60 O
ATOM 25 O5' C B2177 82.205 41.029 102.897 1.00 66.92 O
TER

Atoms:
OP1: (71.840,38.298,90.668)
OP2: (74.259,39.153,90.552)
C3': (72.552,42.682,90.933)
C1': (73.158,43.660,92.998)
C5': (71.429,40.742,92.182)
O4': (72.010,42.877,93.243)
C8: (74.672,42.476,94.689)
O2': (74.596,44.035,91.092)
C6: (75.886,45.040,96.788)
C5: (75.316,44.122,95.870)
C4: (74.449,44.640,94.923)
P: (73.057,38.814,91.354)
C4': (71.572,42.239,92.005)
C2': (73.786,43.079,91.739)
C2: (74.670,46.682,95.713)
N1: (75.530,46.338,96.680)
N3: (74.080,45.922,94.791)
N6: (76.753,44.697,97.743)
N7: (75.442,42.748,95.716)
N9: (74.049,43.577,94.155)
O5': (72.724,40.105,92.235)
O3': (72.007,43.788,90.243)
C4: (76.557,39.532,96.079)
N3: (76.944,40.686,96.719)
OP1: (80.350,34.106,100.388)
OP2: (78.448,34.365,98.681)
C2: (77.789,40.791,97.792)
C1': (79.134,39.646,99.453)
C3': (79.959,38.521,101.336)
O5': (79.933,36.301,99.305)
O4': (80.394,39.131,99.087)
C5': (81.176,36.918,99.719)
P: (79.815,34.718,99.147)
C4': (80.937,38.344,100.179)
C2': (78.646,38.806,100.633)
O2': (77.773,39.543,101.471)
N1: (78.268,39.595,98.271)
O4: (75.804,39.605,95.113)
O2: (78.102,41.869,98.275)
C6: (77.937,38.403,97.671)
C5: (77.121,38.331,96.617)
O3': (80.320,39.686,102.036)
Image (generated by PyMOL):
PyMOL image
show in jmol