Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0229:0258
Extra
PDB:
ATOM 1 O3' C A 228 83.834 113.066 6.037 1.00 37.18 O
ATOM 2 P A A 229 85.243 112.738 5.342 1.00 37.28 P
ATOM 3 OP1 A A 229 86.007 114.018 5.329 1.00 38.37 O
ATOM 4 OP2 A A 229 84.975 112.022 4.072 1.00 37.21 O
ATOM 5 O5' A A 229 85.983 111.741 6.338 1.00 37.75 O
ATOM 6 C5' A A 229 86.696 112.240 7.473 1.00 37.59 C
ATOM 7 C4' A A 229 87.467 111.130 8.138 1.00 39.19 C
ATOM 8 O4' A A 229 86.556 110.149 8.692 1.00 39.94 O
ATOM 9 C3' A A 229 88.333 110.287 7.227 1.00 39.13 C
ATOM 10 O3' A A 229 89.535 110.959 6.907 1.00 41.74 O
ATOM 11 C2' A A 229 88.578 109.054 8.086 1.00 39.04 C
ATOM 12 O2' A A 229 89.560 109.256 9.078 1.00 38.34 O
ATOM 13 C1' A A 229 87.224 108.902 8.781 1.00 39.83 C
ATOM 14 N9 A A 229 86.379 107.857 8.201 1.00 40.80 N
ATOM 15 C8 A A 229 85.377 107.960 7.264 1.00 40.66 C
ATOM 16 N7 A A 229 84.809 106.817 6.972 1.00 40.27 N
ATOM 17 C5 A A 229 85.486 105.897 7.762 1.00 40.74 C
ATOM 18 C6 A A 229 85.362 104.506 7.913 1.00 41.41 C
ATOM 19 N6 A A 229 84.482 103.763 7.236 1.00 43.29 N
ATOM 20 N1 A A 229 86.187 103.895 8.790 1.00 40.57 N
ATOM 21 C2 A A 229 87.077 104.637 9.460 1.00 41.67 C
ATOM 22 N3 A A 229 87.293 105.946 9.401 1.00 39.24 N
ATOM 23 C4 A A 229 86.454 106.524 8.524 1.00 40.74 C
ATOM 24 P A A 230 90.013 111.034 5.378 1.00 42.24 P
ATOM 25 OP1 A A 230 91.280 111.817 5.366 1.00 42.62 O
ATOM 26 OP2 A A 230 88.859 111.481 4.546 1.00 39.19 O
ATOM 27 O5' A A 230 90.351 109.521 5.019 1.00 37.51 O
TER
ATOM 1 O3' G B 257 79.133 103.834 -0.105 1.00 46.66 O
ATOM 2 P U B 258 77.647 103.790 0.505 1.00 47.97 P
ATOM 3 OP1 U B 258 76.996 102.542 0.030 1.00 48.46 O
ATOM 4 OP2 U B 258 76.987 105.097 0.256 1.00 45.27 O
ATOM 5 O5' U B 258 77.910 103.632 2.065 1.00 49.65 O
ATOM 6 C5' U B 258 78.603 102.479 2.576 1.00 51.41 C
ATOM 7 C4' U B 258 78.850 102.624 4.061 1.00 53.67 C
ATOM 8 O4' U B 258 79.950 103.553 4.304 1.00 51.02 O
ATOM 9 C3' U B 258 77.665 103.137 4.879 1.00 55.24 C
ATOM 10 O3' U B 258 77.629 102.476 6.142 1.00 61.65 O
ATOM 11 C2' U B 258 78.020 104.609 5.076 1.00 52.36 C
ATOM 12 O2' U B 258 77.401 105.189 6.210 1.00 52.30 O
ATOM 13 C1' U B 258 79.536 104.514 5.248 1.00 49.05 C
ATOM 14 N1 U B 258 80.339 105.741 5.090 1.00 43.86 N
ATOM 15 C2 U B 258 81.681 105.678 5.440 1.00 41.45 C
ATOM 16 O2 U B 258 82.233 104.648 5.778 1.00 39.03 O
ATOM 17 N3 U B 258 82.354 106.870 5.376 1.00 40.17 N
ATOM 18 C4 U B 258 81.847 108.093 4.993 1.00 42.00 C
ATOM 19 O4 U B 258 82.529 109.107 5.165 1.00 42.80 O
ATOM 20 C5 U B 258 80.476 108.068 4.587 1.00 40.62 C
ATOM 21 C6 U B 258 79.786 106.925 4.647 1.00 42.09 C
ATOM 22 P C B 259 76.231 101.914 6.709 1.00 66.11 P
ATOM 23 OP1 C B 259 75.137 102.874 6.403 1.00 63.64 O
ATOM 24 OP2 C B 259 76.480 101.509 8.114 1.00 67.28 O
ATOM 25 O5' C B 259 75.970 100.592 5.863 1.00 70.21 O
TER
ATOM 2 P A A 229 85.243 112.738 5.342 1.00 37.28 P
ATOM 3 OP1 A A 229 86.007 114.018 5.329 1.00 38.37 O
ATOM 4 OP2 A A 229 84.975 112.022 4.072 1.00 37.21 O
ATOM 5 O5' A A 229 85.983 111.741 6.338 1.00 37.75 O
ATOM 6 C5' A A 229 86.696 112.240 7.473 1.00 37.59 C
ATOM 7 C4' A A 229 87.467 111.130 8.138 1.00 39.19 C
ATOM 8 O4' A A 229 86.556 110.149 8.692 1.00 39.94 O
ATOM 9 C3' A A 229 88.333 110.287 7.227 1.00 39.13 C
ATOM 10 O3' A A 229 89.535 110.959 6.907 1.00 41.74 O
ATOM 11 C2' A A 229 88.578 109.054 8.086 1.00 39.04 C
ATOM 12 O2' A A 229 89.560 109.256 9.078 1.00 38.34 O
ATOM 13 C1' A A 229 87.224 108.902 8.781 1.00 39.83 C
ATOM 14 N9 A A 229 86.379 107.857 8.201 1.00 40.80 N
ATOM 15 C8 A A 229 85.377 107.960 7.264 1.00 40.66 C
ATOM 16 N7 A A 229 84.809 106.817 6.972 1.00 40.27 N
ATOM 17 C5 A A 229 85.486 105.897 7.762 1.00 40.74 C
ATOM 18 C6 A A 229 85.362 104.506 7.913 1.00 41.41 C
ATOM 19 N6 A A 229 84.482 103.763 7.236 1.00 43.29 N
ATOM 20 N1 A A 229 86.187 103.895 8.790 1.00 40.57 N
ATOM 21 C2 A A 229 87.077 104.637 9.460 1.00 41.67 C
ATOM 22 N3 A A 229 87.293 105.946 9.401 1.00 39.24 N
ATOM 23 C4 A A 229 86.454 106.524 8.524 1.00 40.74 C
ATOM 24 P A A 230 90.013 111.034 5.378 1.00 42.24 P
ATOM 25 OP1 A A 230 91.280 111.817 5.366 1.00 42.62 O
ATOM 26 OP2 A A 230 88.859 111.481 4.546 1.00 39.19 O
ATOM 27 O5' A A 230 90.351 109.521 5.019 1.00 37.51 O
TER
ATOM 1 O3' G B 257 79.133 103.834 -0.105 1.00 46.66 O
ATOM 2 P U B 258 77.647 103.790 0.505 1.00 47.97 P
ATOM 3 OP1 U B 258 76.996 102.542 0.030 1.00 48.46 O
ATOM 4 OP2 U B 258 76.987 105.097 0.256 1.00 45.27 O
ATOM 5 O5' U B 258 77.910 103.632 2.065 1.00 49.65 O
ATOM 6 C5' U B 258 78.603 102.479 2.576 1.00 51.41 C
ATOM 7 C4' U B 258 78.850 102.624 4.061 1.00 53.67 C
ATOM 8 O4' U B 258 79.950 103.553 4.304 1.00 51.02 O
ATOM 9 C3' U B 258 77.665 103.137 4.879 1.00 55.24 C
ATOM 10 O3' U B 258 77.629 102.476 6.142 1.00 61.65 O
ATOM 11 C2' U B 258 78.020 104.609 5.076 1.00 52.36 C
ATOM 12 O2' U B 258 77.401 105.189 6.210 1.00 52.30 O
ATOM 13 C1' U B 258 79.536 104.514 5.248 1.00 49.05 C
ATOM 14 N1 U B 258 80.339 105.741 5.090 1.00 43.86 N
ATOM 15 C2 U B 258 81.681 105.678 5.440 1.00 41.45 C
ATOM 16 O2 U B 258 82.233 104.648 5.778 1.00 39.03 O
ATOM 17 N3 U B 258 82.354 106.870 5.376 1.00 40.17 N
ATOM 18 C4 U B 258 81.847 108.093 4.993 1.00 42.00 C
ATOM 19 O4 U B 258 82.529 109.107 5.165 1.00 42.80 O
ATOM 20 C5 U B 258 80.476 108.068 4.587 1.00 40.62 C
ATOM 21 C6 U B 258 79.786 106.925 4.647 1.00 42.09 C
ATOM 22 P C B 259 76.231 101.914 6.709 1.00 66.11 P
ATOM 23 OP1 C B 259 75.137 102.874 6.403 1.00 63.64 O
ATOM 24 OP2 C B 259 76.480 101.509 8.114 1.00 67.28 O
ATOM 25 O5' C B 259 75.970 100.592 5.863 1.00 70.21 O
TER
Atoms:
OP1: (86.007,114.018,5.329)
OP2: (84.975,112.022,4.072)
C3': (88.333,110.287,7.227)
C1': (87.224,108.902,8.781)
C5': (86.696,112.240,7.473)
O4': (86.556,110.149,8.692)
C8: (85.377,107.960,7.264)
O2': (89.560,109.256,9.078)
C6: (85.362,104.506,7.913)
C5: (85.486,105.897,7.762)
C4: (86.454,106.524,8.524)
P: (85.243,112.738,5.342)
C4': (87.467,111.130,8.138)
C2': (88.578,109.054,8.086)
C2: (87.077,104.637,9.460)
N1: (86.187,103.895,8.790)
N3: (87.293,105.946,9.401)
N6: (84.482,103.763,7.236)
N7: (84.809,106.817,6.972)
N9: (86.379,107.857,8.201)
O5': (85.983,111.741,6.338)
O3': (89.535,110.959,6.907)
OP2: (84.975,112.022,4.072)
C3': (88.333,110.287,7.227)
C1': (87.224,108.902,8.781)
C5': (86.696,112.240,7.473)
O4': (86.556,110.149,8.692)
C8: (85.377,107.960,7.264)
O2': (89.560,109.256,9.078)
C6: (85.362,104.506,7.913)
C5: (85.486,105.897,7.762)
C4: (86.454,106.524,8.524)
P: (85.243,112.738,5.342)
C4': (87.467,111.130,8.138)
C2': (88.578,109.054,8.086)
C2: (87.077,104.637,9.460)
N1: (86.187,103.895,8.790)
N3: (87.293,105.946,9.401)
N6: (84.482,103.763,7.236)
N7: (84.809,106.817,6.972)
N9: (86.379,107.857,8.201)
O5': (85.983,111.741,6.338)
O3': (89.535,110.959,6.907)
C4: (81.847,108.093,4.993)
N3: (82.354,106.870,5.376)
OP1: (76.996,102.542,0.030)
OP2: (76.987,105.097,0.256)
C2: (81.681,105.678,5.440)
C1': (79.536,104.514,5.248)
C3': (77.665,103.137,4.879)
O5': (77.910,103.632,2.065)
O4': (79.950,103.553,4.304)
C5': (78.603,102.479,2.576)
P: (77.647,103.790,0.505)
C4': (78.850,102.624,4.061)
C2': (78.020,104.609,5.076)
O2': (77.401,105.189,6.210)
N1: (80.339,105.741,5.090)
O4: (82.529,109.107,5.165)
O2: (82.233,104.648,5.778)
C6: (79.786,106.925,4.647)
C5: (80.476,108.068,4.587)
O3': (77.629,102.476,6.142)
N3: (82.354,106.870,5.376)
OP1: (76.996,102.542,0.030)
OP2: (76.987,105.097,0.256)
C2: (81.681,105.678,5.440)
C1': (79.536,104.514,5.248)
C3': (77.665,103.137,4.879)
O5': (77.910,103.632,2.065)
O4': (79.950,103.553,4.304)
C5': (78.603,102.479,2.576)
P: (77.647,103.790,0.505)
C4': (78.850,102.624,4.061)
C2': (78.020,104.609,5.076)
O2': (77.401,105.189,6.210)
N1: (80.339,105.741,5.090)
O4: (82.529,109.107,5.165)
O2: (82.233,104.648,5.778)
C6: (79.786,106.925,4.647)
C5: (80.476,108.068,4.587)
O3': (77.629,102.476,6.142)
Image (generated by PyMOL):