ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0441:020

Extra

PDB:
ATOM 1 O3' G A 440 34.380 132.475 56.129 1.00 31.45 O
ATOM 2 P A A 441 34.125 133.062 57.599 1.00 32.63 P
ATOM 3 OP1 A A 441 34.088 131.937 58.564 1.00 32.13 O
ATOM 4 OP2 A A 441 32.973 133.993 57.522 1.00 33.29 O
ATOM 5 O5' A A 441 35.432 133.933 57.869 1.00 32.23 O
ATOM 6 C5' A A 441 36.729 133.306 57.988 1.00 30.98 C
ATOM 7 C4' A A 441 37.803 134.354 58.147 1.00 29.17 C
ATOM 8 O4' A A 441 38.070 134.987 56.866 1.00 27.35 O
ATOM 9 C3' A A 441 37.433 135.476 59.107 1.00 29.47 C
ATOM 10 O3' A A 441 38.606 135.964 59.757 1.00 30.00 O
ATOM 11 C2' A A 441 36.866 136.525 58.155 1.00 29.00 C
ATOM 12 O2' A A 441 36.902 137.838 58.670 1.00 29.41 O
ATOM 13 C1' A A 441 37.798 136.368 56.957 1.00 28.18 C
ATOM 14 N9 A A 441 37.232 136.817 55.685 1.00 28.62 N
ATOM 15 C8 A A 441 36.187 136.280 54.972 1.00 28.17 C
ATOM 16 N7 A A 441 35.922 136.918 53.861 1.00 27.00 N
ATOM 17 C5 A A 441 36.855 137.943 53.836 1.00 28.81 C
ATOM 18 C6 A A 441 37.104 138.974 52.912 1.00 30.00 C
ATOM 19 N6 A A 441 36.412 139.142 51.782 1.00 29.89 N
ATOM 20 N1 A A 441 38.105 139.839 53.193 1.00 30.34 N
ATOM 21 C2 A A 441 38.806 139.666 54.322 1.00 28.54 C
ATOM 22 N3 A A 441 38.670 138.734 55.261 1.00 28.21 N
ATOM 23 C4 A A 441 37.666 137.894 54.955 1.00 28.18 C
ATOM 24 P U A 442 38.854 135.640 61.310 1.00 27.57 P
ATOM 25 OP1 U A 442 37.542 135.364 61.933 1.00 27.81 O
ATOM 26 OP2 U A 442 39.720 136.702 61.867 1.00 28.11 O
ATOM 27 O5' U A 442 39.704 134.299 61.277 1.00 28.48 O
TER

ATOM 1 O3' C B 19 27.035 135.818 48.833 1.00 37.00 O
ATOM 2 P U B 20 27.901 134.793 47.958 1.00 39.04 P
ATOM 3 OP1 U B 20 27.230 134.634 46.642 1.00 38.99 O
ATOM 4 OP2 U B 20 28.145 133.601 48.806 1.00 38.16 O
ATOM 5 O5' U B 20 29.286 135.549 47.725 1.00 38.95 O
ATOM 6 C5' U B 20 29.311 136.933 47.343 1.00 36.49 C
ATOM 7 C4' U B 20 30.721 137.476 47.395 1.00 35.53 C
ATOM 8 O4' U B 20 31.214 137.430 48.756 1.00 34.55 O
ATOM 9 C3' U B 20 31.774 136.777 46.544 1.00 35.68 C
ATOM 10 O3' U B 20 32.699 137.741 46.066 1.00 37.13 O
ATOM 11 C2' U B 20 32.499 135.902 47.551 1.00 34.07 C
ATOM 12 O2' U B 20 33.826 135.629 47.141 1.00 33.90 O
ATOM 13 C1' U B 20 32.475 136.805 48.778 1.00 34.37 C
ATOM 14 N1 U B 20 32.633 136.112 50.065 1.00 36.90 N
ATOM 15 C2 U B 20 33.686 136.498 50.875 1.00 37.17 C
ATOM 16 O2 U B 20 34.440 137.421 50.598 1.00 36.46 O
ATOM 17 N3 U B 20 33.821 135.768 52.030 1.00 37.30 N
ATOM 18 C4 U B 20 33.021 134.734 52.457 1.00 36.88 C
ATOM 19 O4 U B 20 33.335 134.107 53.467 1.00 36.17 O
ATOM 20 C5 U B 20 31.932 134.427 51.590 1.00 37.33 C
ATOM 21 C6 U B 20 31.779 135.106 50.451 1.00 37.12 C
ATOM 22 P C B 21 32.520 138.348 44.599 1.00 38.64 P
ATOM 23 OP1 C B 21 32.162 139.779 44.755 1.00 39.38 O
ATOM 24 OP2 C B 21 31.627 137.446 43.825 1.00 39.18 O
ATOM 25 O5' C B 21 33.961 138.234 43.942 1.00 39.88 O
TER

Atoms:
OP1: (34.088,131.937,58.564)
OP2: (32.973,133.993,57.522)
C3': (37.433,135.476,59.107)
C1': (37.798,136.368,56.957)
C5': (36.729,133.306,57.988)
O4': (38.070,134.987,56.866)
C8: (36.187,136.280,54.972)
O2': (36.902,137.838,58.670)
C6: (37.104,138.974,52.912)
C5: (36.855,137.943,53.836)
C4: (37.666,137.894,54.955)
P: (34.125,133.062,57.599)
C4': (37.803,134.354,58.147)
C2': (36.866,136.525,58.155)
C2: (38.806,139.666,54.322)
N1: (38.105,139.839,53.193)
N3: (38.670,138.734,55.261)
N6: (36.412,139.142,51.782)
N7: (35.922,136.918,53.861)
N9: (37.232,136.817,55.685)
O5': (35.432,133.933,57.869)
O3': (38.606,135.964,59.757)
C4: (33.021,134.734,52.457)
N3: (33.821,135.768,52.030)
OP1: (27.230,134.634,46.642)
OP2: (28.145,133.601,48.806)
C2: (33.686,136.498,50.875)
C1': (32.475,136.805,48.778)
C3': (31.774,136.777,46.544)
O5': (29.286,135.549,47.725)
O4': (31.214,137.430,48.756)
C5': (29.311,136.933,47.343)
P: (27.901,134.793,47.958)
C4': (30.721,137.476,47.395)
C2': (32.499,135.902,47.551)
O2': (33.826,135.629,47.141)
N1: (32.633,136.112,50.065)
O4: (33.335,134.107,53.467)
O2: (34.440,137.421,50.598)
C6: (31.779,135.106,50.451)
C5: (31.932,134.427,51.590)
O3': (32.699,137.741,46.066)
Image (generated by PyMOL):
PyMOL image
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