Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A63:A62
Extra
PDB:
ATOM 1 O3' G A 62 -1.586 6.708 -0.704 1.00 30.85 O
ATOM 2 P C A 63 -0.500 5.975 0.223 1.00 35.01 P
ATOM 3 OP1 C A 63 0.003 4.798 -0.533 1.00 36.48 O
ATOM 4 OP2 C A 63 -1.129 5.756 1.543 1.00 34.82 O
ATOM 5 O5' C A 63 0.644 7.069 0.345 1.00 26.46 O
ATOM 6 C5' C A 63 1.153 7.719 -0.807 1.00 29.04 C
ATOM 7 C4' C A 63 2.264 8.663 -0.448 1.00 30.69 C
ATOM 8 O4' C A 63 1.711 9.897 0.087 1.00 28.90 O
ATOM 9 C3' C A 63 3.209 8.177 0.638 1.00 32.04 C
ATOM 10 O3' C A 63 4.195 7.283 0.147 1.00 32.37 O
ATOM 11 C2' C A 63 3.773 9.477 1.192 1.00 31.35 C
ATOM 12 O2' C A 63 4.780 9.988 0.334 1.00 34.44 O
ATOM 13 C1' C A 63 2.552 10.398 1.103 1.00 27.89 C
ATOM 14 N1 C A 63 1.786 10.440 2.370 1.00 26.37 N
ATOM 15 C2 C A 63 2.143 11.385 3.333 1.00 25.25 C
ATOM 16 O2 C A 63 3.096 12.142 3.100 1.00 27.45 O
ATOM 17 N3 C A 63 1.455 11.447 4.494 1.00 24.07 N
ATOM 18 C4 C A 63 0.431 10.620 4.713 1.00 23.43 C
ATOM 19 N4 C A 63 -0.223 10.720 5.876 1.00 21.75 N
ATOM 20 C5 C A 63 0.038 9.647 3.747 1.00 25.87 C
ATOM 21 C6 C A 63 0.732 9.597 2.599 1.00 26.47 C
ATOM 22 P G A 64 5.101 6.433 1.162 1.00 39.92 P
ATOM 23 OP1 G A 64 5.978 5.565 0.341 1.00 44.00 O
ATOM 24 OP2 G A 64 4.189 5.798 2.145 1.00 37.44 O
ATOM 25 O5' G A 64 5.969 7.558 1.876 1.00 37.48 O
TER
ATOM 1 O3' A B 61 -8.229 7.903 -0.987 1.00 27.70 O
ATOM 2 P G B 62 -7.352 7.093 0.078 1.00 33.22 P
ATOM 3 OP1 G B 62 -8.093 5.844 0.396 1.00 34.80 O
ATOM 4 OP2 G B 62 -7.026 8.032 1.183 1.00 28.63 O
ATOM 5 O5' G B 62 -6.041 6.750 -0.746 1.00 26.15 O
ATOM 6 C5' G B 62 -4.775 6.719 -0.115 1.00 27.77 C
ATOM 7 C4' G B 62 -3.819 7.696 -0.750 1.00 29.27 C
ATOM 8 O4' G B 62 -4.310 9.055 -0.572 1.00 28.15 O
ATOM 9 C3' G B 62 -2.418 7.716 -0.162 1.00 28.10 C
ATOM 10 O3' G B 62 -1.586 6.708 -0.704 1.00 30.85 O
ATOM 11 C2' G B 62 -1.942 9.132 -0.457 1.00 27.58 C
ATOM 12 O2' G B 62 -1.523 9.252 -1.810 1.00 26.52 O
ATOM 13 C1' G B 62 -3.236 9.925 -0.281 1.00 25.92 C
ATOM 14 N9 G B 62 -3.402 10.418 1.103 1.00 23.96 N
ATOM 15 C8 G B 62 -4.414 10.070 1.964 1.00 23.64 C
ATOM 16 N7 G B 62 -4.335 10.654 3.129 1.00 24.81 N
ATOM 17 C5 G B 62 -3.203 11.451 3.030 1.00 26.77 C
ATOM 18 C6 G B 62 -2.618 12.323 3.986 1.00 25.39 C
ATOM 19 O6 G B 62 -2.996 12.572 5.141 1.00 24.13 O
ATOM 20 N1 G B 62 -1.479 12.939 3.479 1.00 24.07 N
ATOM 21 C2 G B 62 -0.971 12.746 2.218 1.00 23.27 C
ATOM 22 N2 G B 62 0.140 13.437 1.919 1.00 19.27 N
ATOM 23 N3 G B 62 -1.508 11.937 1.316 1.00 23.67 N
ATOM 24 C4 G B 62 -2.617 11.325 1.784 1.00 25.71 C
ATOM 25 P C B 63 -0.500 5.975 0.223 1.00 35.01 P
ATOM 26 OP1 C B 63 0.003 4.798 -0.533 1.00 36.48 O
ATOM 27 OP2 C B 63 -1.129 5.756 1.543 1.00 34.82 O
ATOM 28 O5' C B 63 0.644 7.069 0.345 1.00 26.46 O
TER
ATOM 2 P C A 63 -0.500 5.975 0.223 1.00 35.01 P
ATOM 3 OP1 C A 63 0.003 4.798 -0.533 1.00 36.48 O
ATOM 4 OP2 C A 63 -1.129 5.756 1.543 1.00 34.82 O
ATOM 5 O5' C A 63 0.644 7.069 0.345 1.00 26.46 O
ATOM 6 C5' C A 63 1.153 7.719 -0.807 1.00 29.04 C
ATOM 7 C4' C A 63 2.264 8.663 -0.448 1.00 30.69 C
ATOM 8 O4' C A 63 1.711 9.897 0.087 1.00 28.90 O
ATOM 9 C3' C A 63 3.209 8.177 0.638 1.00 32.04 C
ATOM 10 O3' C A 63 4.195 7.283 0.147 1.00 32.37 O
ATOM 11 C2' C A 63 3.773 9.477 1.192 1.00 31.35 C
ATOM 12 O2' C A 63 4.780 9.988 0.334 1.00 34.44 O
ATOM 13 C1' C A 63 2.552 10.398 1.103 1.00 27.89 C
ATOM 14 N1 C A 63 1.786 10.440 2.370 1.00 26.37 N
ATOM 15 C2 C A 63 2.143 11.385 3.333 1.00 25.25 C
ATOM 16 O2 C A 63 3.096 12.142 3.100 1.00 27.45 O
ATOM 17 N3 C A 63 1.455 11.447 4.494 1.00 24.07 N
ATOM 18 C4 C A 63 0.431 10.620 4.713 1.00 23.43 C
ATOM 19 N4 C A 63 -0.223 10.720 5.876 1.00 21.75 N
ATOM 20 C5 C A 63 0.038 9.647 3.747 1.00 25.87 C
ATOM 21 C6 C A 63 0.732 9.597 2.599 1.00 26.47 C
ATOM 22 P G A 64 5.101 6.433 1.162 1.00 39.92 P
ATOM 23 OP1 G A 64 5.978 5.565 0.341 1.00 44.00 O
ATOM 24 OP2 G A 64 4.189 5.798 2.145 1.00 37.44 O
ATOM 25 O5' G A 64 5.969 7.558 1.876 1.00 37.48 O
TER
ATOM 1 O3' A B 61 -8.229 7.903 -0.987 1.00 27.70 O
ATOM 2 P G B 62 -7.352 7.093 0.078 1.00 33.22 P
ATOM 3 OP1 G B 62 -8.093 5.844 0.396 1.00 34.80 O
ATOM 4 OP2 G B 62 -7.026 8.032 1.183 1.00 28.63 O
ATOM 5 O5' G B 62 -6.041 6.750 -0.746 1.00 26.15 O
ATOM 6 C5' G B 62 -4.775 6.719 -0.115 1.00 27.77 C
ATOM 7 C4' G B 62 -3.819 7.696 -0.750 1.00 29.27 C
ATOM 8 O4' G B 62 -4.310 9.055 -0.572 1.00 28.15 O
ATOM 9 C3' G B 62 -2.418 7.716 -0.162 1.00 28.10 C
ATOM 10 O3' G B 62 -1.586 6.708 -0.704 1.00 30.85 O
ATOM 11 C2' G B 62 -1.942 9.132 -0.457 1.00 27.58 C
ATOM 12 O2' G B 62 -1.523 9.252 -1.810 1.00 26.52 O
ATOM 13 C1' G B 62 -3.236 9.925 -0.281 1.00 25.92 C
ATOM 14 N9 G B 62 -3.402 10.418 1.103 1.00 23.96 N
ATOM 15 C8 G B 62 -4.414 10.070 1.964 1.00 23.64 C
ATOM 16 N7 G B 62 -4.335 10.654 3.129 1.00 24.81 N
ATOM 17 C5 G B 62 -3.203 11.451 3.030 1.00 26.77 C
ATOM 18 C6 G B 62 -2.618 12.323 3.986 1.00 25.39 C
ATOM 19 O6 G B 62 -2.996 12.572 5.141 1.00 24.13 O
ATOM 20 N1 G B 62 -1.479 12.939 3.479 1.00 24.07 N
ATOM 21 C2 G B 62 -0.971 12.746 2.218 1.00 23.27 C
ATOM 22 N2 G B 62 0.140 13.437 1.919 1.00 19.27 N
ATOM 23 N3 G B 62 -1.508 11.937 1.316 1.00 23.67 N
ATOM 24 C4 G B 62 -2.617 11.325 1.784 1.00 25.71 C
ATOM 25 P C B 63 -0.500 5.975 0.223 1.00 35.01 P
ATOM 26 OP1 C B 63 0.003 4.798 -0.533 1.00 36.48 O
ATOM 27 OP2 C B 63 -1.129 5.756 1.543 1.00 34.82 O
ATOM 28 O5' C B 63 0.644 7.069 0.345 1.00 26.46 O
TER
Atoms:
C2: (2.143,11.385,3.333)
OP1: (0.003,4.798,-0.533)
OP2: (-1.129,5.756,1.543)
C4: (0.431,10.620,4.713)
O5': (0.644,7.069,0.345)
C3': (3.209,8.177,0.638)
C1': (2.552,10.398,1.103)
O4': (1.711,9.897,0.087)
C5': (1.153,7.719,-0.807)
P: (-0.500,5.975,0.223)
O2: (3.096,12.142,3.100)
C4': (2.264,8.663,-0.448)
C2': (3.773,9.477,1.192)
O2': (4.780,9.988,0.334)
N1: (1.786,10.440,2.370)
N3: (1.455,11.447,4.494)
N4: (-0.223,10.720,5.876)
C6: (0.732,9.597,2.599)
C5: (0.038,9.647,3.747)
O3': (4.195,7.283,0.147)
OP1: (0.003,4.798,-0.533)
OP2: (-1.129,5.756,1.543)
C4: (0.431,10.620,4.713)
O5': (0.644,7.069,0.345)
C3': (3.209,8.177,0.638)
C1': (2.552,10.398,1.103)
O4': (1.711,9.897,0.087)
C5': (1.153,7.719,-0.807)
P: (-0.500,5.975,0.223)
O2: (3.096,12.142,3.100)
C4': (2.264,8.663,-0.448)
C2': (3.773,9.477,1.192)
O2': (4.780,9.988,0.334)
N1: (1.786,10.440,2.370)
N3: (1.455,11.447,4.494)
N4: (-0.223,10.720,5.876)
C6: (0.732,9.597,2.599)
C5: (0.038,9.647,3.747)
O3': (4.195,7.283,0.147)
OP1: (-8.093,5.844,0.396)
OP2: (-7.026,8.032,1.183)
C3': (-2.418,7.716,-0.162)
C1': (-3.236,9.925,-0.281)
C5': (-4.775,6.719,-0.115)
O6: (-2.996,12.572,5.141)
O4': (-4.310,9.055,-0.572)
C8: (-4.414,10.070,1.964)
C2: (-0.971,12.746,2.218)
C6: (-2.618,12.323,3.986)
C5: (-3.203,11.451,3.030)
C4: (-2.617,11.325,1.784)
P: (-7.352,7.093,0.078)
C4': (-3.819,7.696,-0.750)
C2': (-1.942,9.132,-0.457)
O2': (-1.523,9.252,-1.810)
N1: (-1.479,12.939,3.479)
N2: (0.140,13.437,1.919)
N3: (-1.508,11.937,1.316)
N7: (-4.335,10.654,3.129)
N9: (-3.402,10.418,1.103)
O5': (-6.041,6.750,-0.746)
O3': (-1.586,6.708,-0.704)
OP2: (-7.026,8.032,1.183)
C3': (-2.418,7.716,-0.162)
C1': (-3.236,9.925,-0.281)
C5': (-4.775,6.719,-0.115)
O6: (-2.996,12.572,5.141)
O4': (-4.310,9.055,-0.572)
C8: (-4.414,10.070,1.964)
C2: (-0.971,12.746,2.218)
C6: (-2.618,12.323,3.986)
C5: (-3.203,11.451,3.030)
C4: (-2.617,11.325,1.784)
P: (-7.352,7.093,0.078)
C4': (-3.819,7.696,-0.750)
C2': (-1.942,9.132,-0.457)
O2': (-1.523,9.252,-1.810)
N1: (-1.479,12.939,3.479)
N2: (0.140,13.437,1.919)
N3: (-1.508,11.937,1.316)
N7: (-4.335,10.654,3.129)
N9: (-3.402,10.418,1.103)
O5': (-6.041,6.750,-0.746)
O3': (-1.586,6.708,-0.704)
Image (generated by PyMOL):