Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2006:A1260
Extra
PDB:
ATOM 1 O3' G A2005 -42.084 -78.299 6.648 1.00 0.01 O
ATOM 2 P A A2006 -43.527 -78.976 6.655 1.00 0.01 P
ATOM 3 OP1 A A2006 -44.042 -78.899 8.033 1.00 0.01 O
ATOM 4 OP2 A A2006 -43.378 -80.308 6.021 1.00 0.01 O
ATOM 5 O5' A A2006 -44.366 -78.012 5.728 1.00 0.01 O
ATOM 6 C5' A A2006 -45.660 -77.579 6.119 1.00 0.01 C
ATOM 7 C4' A A2006 -45.653 -76.127 6.524 1.00 0.01 C
ATOM 8 O4' A A2006 -44.971 -75.360 5.514 1.00 0.01 O
ATOM 9 C3' A A2006 -47.014 -75.447 6.659 1.00 0.01 C
ATOM 10 O3' A A2006 -47.597 -75.626 7.930 1.00 0.01 O
ATOM 11 C2' A A2006 -46.665 -74.019 6.389 1.00 0.01 C
ATOM 12 O2' A A2006 -46.007 -73.473 7.497 1.00 0.01 O
ATOM 13 C1' A A2006 -45.650 -74.168 5.285 1.00 0.01 C
ATOM 14 N9 A A2006 -46.294 -74.268 3.987 1.00 0.01 N
ATOM 15 C8 A A2006 -46.267 -75.330 3.152 1.00 0.01 C
ATOM 16 N7 A A2006 -46.960 -75.145 2.070 1.00 0.01 N
ATOM 17 C5 A A2006 -47.464 -73.872 2.220 1.00 0.01 C
ATOM 18 C6 A A2006 -48.264 -73.094 1.403 1.00 0.01 C
ATOM 19 N6 A A2006 -48.730 -73.447 0.232 1.00 0.01 N
ATOM 20 N1 A A2006 -48.575 -71.895 1.865 1.00 0.01 N
ATOM 21 C2 A A2006 -48.110 -71.493 3.052 1.00 0.01 C
ATOM 22 N3 A A2006 -47.345 -72.120 3.907 1.00 0.01 N
ATOM 23 C4 A A2006 -47.066 -73.320 3.412 1.00 0.01 C
ATOM 24 P A A2007 -49.086 -76.191 8.084 1.00 0.01 P
ATOM 25 OP1 A A2007 -49.320 -76.445 9.503 1.00 0.01 O
ATOM 26 OP2 A A2007 -49.215 -77.318 7.150 1.00 0.01 O
ATOM 27 O5' A A2007 -49.964 -74.963 7.609 1.00 0.01 O
TER
ATOM 1 O3' G B1259 -44.748 -81.472 -3.482 1.00 0.01 O
ATOM 2 P U B1260 -43.713 -80.495 -4.229 1.00 0.01 P
ATOM 3 OP1 U B1260 -43.217 -81.222 -5.394 1.00 0.01 O
ATOM 4 OP2 U B1260 -42.750 -80.022 -3.231 1.00 0.01 O
ATOM 5 O5' U B1260 -44.604 -79.280 -4.689 1.00 0.01 O
ATOM 6 C5' U B1260 -45.636 -79.444 -5.632 1.00 0.01 C
ATOM 7 C4' U B1260 -46.802 -78.557 -5.308 1.00 0.01 C
ATOM 8 O4' U B1260 -47.452 -79.059 -4.126 1.00 0.01 O
ATOM 9 C3' U B1260 -46.457 -77.114 -4.981 1.00 0.01 C
ATOM 10 O3' U B1260 -46.384 -76.295 -6.141 1.00 0.01 O
ATOM 11 C2' U B1260 -47.560 -76.704 -4.020 1.00 0.01 C
ATOM 12 O2' U B1260 -48.694 -76.272 -4.719 1.00 0.01 O
ATOM 13 C1' U B1260 -47.910 -78.009 -3.329 1.00 0.01 C
ATOM 14 N1 U B1260 -47.293 -78.128 -2.022 1.00 0.01 N
ATOM 15 C2 U B1260 -47.402 -77.096 -1.154 1.00 0.01 C
ATOM 16 O2 U B1260 -47.961 -76.089 -1.443 1.00 0.01 O
ATOM 17 N3 U B1260 -46.803 -77.267 0.045 1.00 0.01 N
ATOM 18 C4 U B1260 -46.110 -78.362 0.447 1.00 0.01 C
ATOM 19 O4 U B1260 -45.619 -78.381 1.545 1.00 0.01 O
ATOM 20 C5 U B1260 -46.040 -79.411 -0.498 1.00 0.01 C
ATOM 21 C6 U B1260 -46.630 -79.261 -1.682 1.00 0.01 C
ATOM 22 P A B1261 -45.323 -75.100 -6.249 1.00 0.01 P
ATOM 23 OP1 A B1261 -45.547 -74.431 -7.514 1.00 0.01 O
ATOM 24 OP2 A B1261 -43.997 -75.658 -5.973 1.00 0.01 O
ATOM 25 O5' A B1261 -45.752 -74.150 -5.090 1.00 0.01 O
TER
ATOM 2 P A A2006 -43.527 -78.976 6.655 1.00 0.01 P
ATOM 3 OP1 A A2006 -44.042 -78.899 8.033 1.00 0.01 O
ATOM 4 OP2 A A2006 -43.378 -80.308 6.021 1.00 0.01 O
ATOM 5 O5' A A2006 -44.366 -78.012 5.728 1.00 0.01 O
ATOM 6 C5' A A2006 -45.660 -77.579 6.119 1.00 0.01 C
ATOM 7 C4' A A2006 -45.653 -76.127 6.524 1.00 0.01 C
ATOM 8 O4' A A2006 -44.971 -75.360 5.514 1.00 0.01 O
ATOM 9 C3' A A2006 -47.014 -75.447 6.659 1.00 0.01 C
ATOM 10 O3' A A2006 -47.597 -75.626 7.930 1.00 0.01 O
ATOM 11 C2' A A2006 -46.665 -74.019 6.389 1.00 0.01 C
ATOM 12 O2' A A2006 -46.007 -73.473 7.497 1.00 0.01 O
ATOM 13 C1' A A2006 -45.650 -74.168 5.285 1.00 0.01 C
ATOM 14 N9 A A2006 -46.294 -74.268 3.987 1.00 0.01 N
ATOM 15 C8 A A2006 -46.267 -75.330 3.152 1.00 0.01 C
ATOM 16 N7 A A2006 -46.960 -75.145 2.070 1.00 0.01 N
ATOM 17 C5 A A2006 -47.464 -73.872 2.220 1.00 0.01 C
ATOM 18 C6 A A2006 -48.264 -73.094 1.403 1.00 0.01 C
ATOM 19 N6 A A2006 -48.730 -73.447 0.232 1.00 0.01 N
ATOM 20 N1 A A2006 -48.575 -71.895 1.865 1.00 0.01 N
ATOM 21 C2 A A2006 -48.110 -71.493 3.052 1.00 0.01 C
ATOM 22 N3 A A2006 -47.345 -72.120 3.907 1.00 0.01 N
ATOM 23 C4 A A2006 -47.066 -73.320 3.412 1.00 0.01 C
ATOM 24 P A A2007 -49.086 -76.191 8.084 1.00 0.01 P
ATOM 25 OP1 A A2007 -49.320 -76.445 9.503 1.00 0.01 O
ATOM 26 OP2 A A2007 -49.215 -77.318 7.150 1.00 0.01 O
ATOM 27 O5' A A2007 -49.964 -74.963 7.609 1.00 0.01 O
TER
ATOM 1 O3' G B1259 -44.748 -81.472 -3.482 1.00 0.01 O
ATOM 2 P U B1260 -43.713 -80.495 -4.229 1.00 0.01 P
ATOM 3 OP1 U B1260 -43.217 -81.222 -5.394 1.00 0.01 O
ATOM 4 OP2 U B1260 -42.750 -80.022 -3.231 1.00 0.01 O
ATOM 5 O5' U B1260 -44.604 -79.280 -4.689 1.00 0.01 O
ATOM 6 C5' U B1260 -45.636 -79.444 -5.632 1.00 0.01 C
ATOM 7 C4' U B1260 -46.802 -78.557 -5.308 1.00 0.01 C
ATOM 8 O4' U B1260 -47.452 -79.059 -4.126 1.00 0.01 O
ATOM 9 C3' U B1260 -46.457 -77.114 -4.981 1.00 0.01 C
ATOM 10 O3' U B1260 -46.384 -76.295 -6.141 1.00 0.01 O
ATOM 11 C2' U B1260 -47.560 -76.704 -4.020 1.00 0.01 C
ATOM 12 O2' U B1260 -48.694 -76.272 -4.719 1.00 0.01 O
ATOM 13 C1' U B1260 -47.910 -78.009 -3.329 1.00 0.01 C
ATOM 14 N1 U B1260 -47.293 -78.128 -2.022 1.00 0.01 N
ATOM 15 C2 U B1260 -47.402 -77.096 -1.154 1.00 0.01 C
ATOM 16 O2 U B1260 -47.961 -76.089 -1.443 1.00 0.01 O
ATOM 17 N3 U B1260 -46.803 -77.267 0.045 1.00 0.01 N
ATOM 18 C4 U B1260 -46.110 -78.362 0.447 1.00 0.01 C
ATOM 19 O4 U B1260 -45.619 -78.381 1.545 1.00 0.01 O
ATOM 20 C5 U B1260 -46.040 -79.411 -0.498 1.00 0.01 C
ATOM 21 C6 U B1260 -46.630 -79.261 -1.682 1.00 0.01 C
ATOM 22 P A B1261 -45.323 -75.100 -6.249 1.00 0.01 P
ATOM 23 OP1 A B1261 -45.547 -74.431 -7.514 1.00 0.01 O
ATOM 24 OP2 A B1261 -43.997 -75.658 -5.973 1.00 0.01 O
ATOM 25 O5' A B1261 -45.752 -74.150 -5.090 1.00 0.01 O
TER
Atoms:
OP1: (-44.042,-78.899,8.033)
OP2: (-43.378,-80.308,6.021)
C3': (-47.014,-75.447,6.659)
C1': (-45.650,-74.168,5.285)
C5': (-45.660,-77.579,6.119)
O4': (-44.971,-75.360,5.514)
C8: (-46.267,-75.330,3.152)
O2': (-46.007,-73.473,7.497)
C6: (-48.264,-73.094,1.403)
C5: (-47.464,-73.872,2.220)
C4: (-47.066,-73.320,3.412)
P: (-43.527,-78.976,6.655)
C4': (-45.653,-76.127,6.524)
C2': (-46.665,-74.019,6.389)
C2: (-48.110,-71.493,3.052)
N1: (-48.575,-71.895,1.865)
N3: (-47.345,-72.120,3.907)
N6: (-48.730,-73.447,0.232)
N7: (-46.960,-75.145,2.070)
N9: (-46.294,-74.268,3.987)
O5': (-44.366,-78.012,5.728)
O3': (-47.597,-75.626,7.930)
OP2: (-43.378,-80.308,6.021)
C3': (-47.014,-75.447,6.659)
C1': (-45.650,-74.168,5.285)
C5': (-45.660,-77.579,6.119)
O4': (-44.971,-75.360,5.514)
C8: (-46.267,-75.330,3.152)
O2': (-46.007,-73.473,7.497)
C6: (-48.264,-73.094,1.403)
C5: (-47.464,-73.872,2.220)
C4: (-47.066,-73.320,3.412)
P: (-43.527,-78.976,6.655)
C4': (-45.653,-76.127,6.524)
C2': (-46.665,-74.019,6.389)
C2: (-48.110,-71.493,3.052)
N1: (-48.575,-71.895,1.865)
N3: (-47.345,-72.120,3.907)
N6: (-48.730,-73.447,0.232)
N7: (-46.960,-75.145,2.070)
N9: (-46.294,-74.268,3.987)
O5': (-44.366,-78.012,5.728)
O3': (-47.597,-75.626,7.930)
C4: (-46.110,-78.362,0.447)
N3: (-46.803,-77.267,0.045)
OP1: (-43.217,-81.222,-5.394)
OP2: (-42.750,-80.022,-3.231)
C2: (-47.402,-77.096,-1.154)
C1': (-47.910,-78.009,-3.329)
C3': (-46.457,-77.114,-4.981)
O5': (-44.604,-79.280,-4.689)
O4': (-47.452,-79.059,-4.126)
C5': (-45.636,-79.444,-5.632)
P: (-43.713,-80.495,-4.229)
C4': (-46.802,-78.557,-5.308)
C2': (-47.560,-76.704,-4.020)
O2': (-48.694,-76.272,-4.719)
N1: (-47.293,-78.128,-2.022)
O4: (-45.619,-78.381,1.545)
O2: (-47.961,-76.089,-1.443)
C6: (-46.630,-79.261,-1.682)
C5: (-46.040,-79.411,-0.498)
O3': (-46.384,-76.295,-6.141)
N3: (-46.803,-77.267,0.045)
OP1: (-43.217,-81.222,-5.394)
OP2: (-42.750,-80.022,-3.231)
C2: (-47.402,-77.096,-1.154)
C1': (-47.910,-78.009,-3.329)
C3': (-46.457,-77.114,-4.981)
O5': (-44.604,-79.280,-4.689)
O4': (-47.452,-79.059,-4.126)
C5': (-45.636,-79.444,-5.632)
P: (-43.713,-80.495,-4.229)
C4': (-46.802,-78.557,-5.308)
C2': (-47.560,-76.704,-4.020)
O2': (-48.694,-76.272,-4.719)
N1: (-47.293,-78.128,-2.022)
O4: (-45.619,-78.381,1.545)
O2: (-47.961,-76.089,-1.443)
C6: (-46.630,-79.261,-1.682)
C5: (-46.040,-79.411,-0.498)
O3': (-46.384,-76.295,-6.141)
Image (generated by PyMOL):