Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A52:A51
Extra
PDB:
ATOM 1 O3' G A 51 53.447 153.707 48.642 1.00 49.05 O
ATOM 2 P C A 52 54.186 153.163 47.319 1.00 50.43 P
ATOM 3 OP1 C A 52 55.105 152.061 47.730 1.00 49.57 O
ATOM 4 OP2 C A 52 54.728 154.303 46.538 1.00 49.67 O
ATOM 5 O5' C A 52 52.999 152.499 46.490 1.00 51.12 O
ATOM 6 C5' C A 52 52.317 151.342 47.000 1.00 51.97 C
ATOM 7 C4' C A 52 51.131 151.002 46.141 1.00 52.95 C
ATOM 8 O4' C A 52 50.135 152.056 46.199 1.00 54.58 O
ATOM 9 C3' C A 52 51.381 150.826 44.660 1.00 52.06 C
ATOM 10 O3' C A 52 51.896 149.545 44.352 1.00 51.92 O
ATOM 11 C2' C A 52 49.978 150.954 44.103 1.00 54.20 C
ATOM 12 O2' C A 52 49.261 149.750 44.280 1.00 55.28 O
ATOM 13 C1' C A 52 49.395 152.064 44.988 1.00 55.67 C
ATOM 14 N1 C A 52 49.525 153.392 44.355 1.00 57.49 N
ATOM 15 C2 C A 52 48.547 153.823 43.435 1.00 58.94 C
ATOM 16 O2 C A 52 47.539 153.121 43.249 1.00 60.46 O
ATOM 17 N3 C A 52 48.730 155.001 42.786 1.00 58.46 N
ATOM 18 C4 C A 52 49.810 155.742 43.045 1.00 57.56 C
ATOM 19 N4 C A 52 49.976 156.871 42.363 1.00 56.42 N
ATOM 20 C5 C A 52 50.778 155.352 44.009 1.00 57.67 C
ATOM 21 C6 C A 52 50.599 154.185 44.632 1.00 57.73 C
ATOM 22 P U A 53 52.820 149.364 43.057 1.00 52.43 P
ATOM 23 OP1 U A 53 53.199 147.939 42.935 1.00 52.26 O
ATOM 24 OP2 U A 53 53.878 150.397 43.163 1.00 52.59 O
ATOM 25 O5' U A 53 51.871 149.751 41.835 1.00 54.12 O
TER
ATOM 1 O3' A B 50 54.384 159.705 49.352 1.00 48.62 O
ATOM 2 P G B 51 54.610 158.579 48.247 1.00 48.54 P
ATOM 3 OP1 G B 51 55.950 158.052 48.560 1.00 50.42 O
ATOM 4 OP2 G B 51 54.323 159.089 46.884 1.00 48.13 O
ATOM 5 O5' G B 51 53.512 157.493 48.614 1.00 49.94 O
ATOM 6 C5' G B 51 53.616 156.709 49.804 1.00 49.35 C
ATOM 7 C4' G B 51 52.550 155.643 49.797 1.00 50.40 C
ATOM 8 O4' G B 51 51.242 156.274 49.862 1.00 50.08 O
ATOM 9 C3' G B 51 52.498 154.774 48.549 1.00 49.14 C
ATOM 10 O3' G B 51 53.447 153.707 48.642 1.00 49.05 O
ATOM 11 C2' G B 51 51.051 154.294 48.552 1.00 49.26 C
ATOM 12 O2' G B 51 50.838 153.214 49.425 1.00 48.66 O
ATOM 13 C1' G B 51 50.312 155.517 49.108 1.00 51.11 C
ATOM 14 N9 G B 51 49.752 156.373 48.067 1.00 53.63 N
ATOM 15 C8 G B 51 50.167 157.639 47.735 1.00 54.69 C
ATOM 16 N7 G B 51 49.536 158.133 46.702 1.00 55.34 N
ATOM 17 C5 G B 51 48.643 157.136 46.332 1.00 55.02 C
ATOM 18 C6 G B 51 47.735 157.080 45.253 1.00 54.81 C
ATOM 19 O6 G B 51 47.553 157.907 44.358 1.00 55.08 O
ATOM 20 N1 G B 51 47.010 155.899 45.260 1.00 55.05 N
ATOM 21 C2 G B 51 47.154 154.889 46.172 1.00 55.16 C
ATOM 22 N2 G B 51 46.351 153.832 46.014 1.00 55.51 N
ATOM 23 N3 G B 51 48.023 154.912 47.169 1.00 54.68 N
ATOM 24 C4 G B 51 48.732 156.057 47.188 1.00 54.18 C
ATOM 25 P C B 52 54.186 153.163 47.319 1.00 50.43 P
ATOM 26 OP1 C B 52 55.105 152.061 47.730 1.00 49.57 O
ATOM 27 OP2 C B 52 54.728 154.303 46.538 1.00 49.67 O
ATOM 28 O5' C B 52 52.999 152.499 46.490 1.00 51.12 O
TER
ATOM 2 P C A 52 54.186 153.163 47.319 1.00 50.43 P
ATOM 3 OP1 C A 52 55.105 152.061 47.730 1.00 49.57 O
ATOM 4 OP2 C A 52 54.728 154.303 46.538 1.00 49.67 O
ATOM 5 O5' C A 52 52.999 152.499 46.490 1.00 51.12 O
ATOM 6 C5' C A 52 52.317 151.342 47.000 1.00 51.97 C
ATOM 7 C4' C A 52 51.131 151.002 46.141 1.00 52.95 C
ATOM 8 O4' C A 52 50.135 152.056 46.199 1.00 54.58 O
ATOM 9 C3' C A 52 51.381 150.826 44.660 1.00 52.06 C
ATOM 10 O3' C A 52 51.896 149.545 44.352 1.00 51.92 O
ATOM 11 C2' C A 52 49.978 150.954 44.103 1.00 54.20 C
ATOM 12 O2' C A 52 49.261 149.750 44.280 1.00 55.28 O
ATOM 13 C1' C A 52 49.395 152.064 44.988 1.00 55.67 C
ATOM 14 N1 C A 52 49.525 153.392 44.355 1.00 57.49 N
ATOM 15 C2 C A 52 48.547 153.823 43.435 1.00 58.94 C
ATOM 16 O2 C A 52 47.539 153.121 43.249 1.00 60.46 O
ATOM 17 N3 C A 52 48.730 155.001 42.786 1.00 58.46 N
ATOM 18 C4 C A 52 49.810 155.742 43.045 1.00 57.56 C
ATOM 19 N4 C A 52 49.976 156.871 42.363 1.00 56.42 N
ATOM 20 C5 C A 52 50.778 155.352 44.009 1.00 57.67 C
ATOM 21 C6 C A 52 50.599 154.185 44.632 1.00 57.73 C
ATOM 22 P U A 53 52.820 149.364 43.057 1.00 52.43 P
ATOM 23 OP1 U A 53 53.199 147.939 42.935 1.00 52.26 O
ATOM 24 OP2 U A 53 53.878 150.397 43.163 1.00 52.59 O
ATOM 25 O5' U A 53 51.871 149.751 41.835 1.00 54.12 O
TER
ATOM 1 O3' A B 50 54.384 159.705 49.352 1.00 48.62 O
ATOM 2 P G B 51 54.610 158.579 48.247 1.00 48.54 P
ATOM 3 OP1 G B 51 55.950 158.052 48.560 1.00 50.42 O
ATOM 4 OP2 G B 51 54.323 159.089 46.884 1.00 48.13 O
ATOM 5 O5' G B 51 53.512 157.493 48.614 1.00 49.94 O
ATOM 6 C5' G B 51 53.616 156.709 49.804 1.00 49.35 C
ATOM 7 C4' G B 51 52.550 155.643 49.797 1.00 50.40 C
ATOM 8 O4' G B 51 51.242 156.274 49.862 1.00 50.08 O
ATOM 9 C3' G B 51 52.498 154.774 48.549 1.00 49.14 C
ATOM 10 O3' G B 51 53.447 153.707 48.642 1.00 49.05 O
ATOM 11 C2' G B 51 51.051 154.294 48.552 1.00 49.26 C
ATOM 12 O2' G B 51 50.838 153.214 49.425 1.00 48.66 O
ATOM 13 C1' G B 51 50.312 155.517 49.108 1.00 51.11 C
ATOM 14 N9 G B 51 49.752 156.373 48.067 1.00 53.63 N
ATOM 15 C8 G B 51 50.167 157.639 47.735 1.00 54.69 C
ATOM 16 N7 G B 51 49.536 158.133 46.702 1.00 55.34 N
ATOM 17 C5 G B 51 48.643 157.136 46.332 1.00 55.02 C
ATOM 18 C6 G B 51 47.735 157.080 45.253 1.00 54.81 C
ATOM 19 O6 G B 51 47.553 157.907 44.358 1.00 55.08 O
ATOM 20 N1 G B 51 47.010 155.899 45.260 1.00 55.05 N
ATOM 21 C2 G B 51 47.154 154.889 46.172 1.00 55.16 C
ATOM 22 N2 G B 51 46.351 153.832 46.014 1.00 55.51 N
ATOM 23 N3 G B 51 48.023 154.912 47.169 1.00 54.68 N
ATOM 24 C4 G B 51 48.732 156.057 47.188 1.00 54.18 C
ATOM 25 P C B 52 54.186 153.163 47.319 1.00 50.43 P
ATOM 26 OP1 C B 52 55.105 152.061 47.730 1.00 49.57 O
ATOM 27 OP2 C B 52 54.728 154.303 46.538 1.00 49.67 O
ATOM 28 O5' C B 52 52.999 152.499 46.490 1.00 51.12 O
TER
Atoms:
C2: (48.547,153.823,43.435)
OP1: (55.105,152.061,47.730)
OP2: (54.728,154.303,46.538)
C4: (49.810,155.742,43.045)
O5': (52.999,152.499,46.490)
C3': (51.381,150.826,44.660)
C1': (49.395,152.064,44.988)
O4': (50.135,152.056,46.199)
C5': (52.317,151.342,47.000)
P: (54.186,153.163,47.319)
O2: (47.539,153.121,43.249)
C4': (51.131,151.002,46.141)
C2': (49.978,150.954,44.103)
O2': (49.261,149.750,44.280)
N1: (49.525,153.392,44.355)
N3: (48.730,155.001,42.786)
N4: (49.976,156.871,42.363)
C6: (50.599,154.185,44.632)
C5: (50.778,155.352,44.009)
O3': (51.896,149.545,44.352)
OP1: (55.105,152.061,47.730)
OP2: (54.728,154.303,46.538)
C4: (49.810,155.742,43.045)
O5': (52.999,152.499,46.490)
C3': (51.381,150.826,44.660)
C1': (49.395,152.064,44.988)
O4': (50.135,152.056,46.199)
C5': (52.317,151.342,47.000)
P: (54.186,153.163,47.319)
O2: (47.539,153.121,43.249)
C4': (51.131,151.002,46.141)
C2': (49.978,150.954,44.103)
O2': (49.261,149.750,44.280)
N1: (49.525,153.392,44.355)
N3: (48.730,155.001,42.786)
N4: (49.976,156.871,42.363)
C6: (50.599,154.185,44.632)
C5: (50.778,155.352,44.009)
O3': (51.896,149.545,44.352)
OP1: (55.950,158.052,48.560)
OP2: (54.323,159.089,46.884)
C3': (52.498,154.774,48.549)
C1': (50.312,155.517,49.108)
C5': (53.616,156.709,49.804)
O6: (47.553,157.907,44.358)
O4': (51.242,156.274,49.862)
C8: (50.167,157.639,47.735)
C2: (47.154,154.889,46.172)
C6: (47.735,157.080,45.253)
C5: (48.643,157.136,46.332)
C4: (48.732,156.057,47.188)
P: (54.610,158.579,48.247)
C4': (52.550,155.643,49.797)
C2': (51.051,154.294,48.552)
O2': (50.838,153.214,49.425)
N1: (47.010,155.899,45.260)
N2: (46.351,153.832,46.014)
N3: (48.023,154.912,47.169)
N7: (49.536,158.133,46.702)
N9: (49.752,156.373,48.067)
O5': (53.512,157.493,48.614)
O3': (53.447,153.707,48.642)
OP2: (54.323,159.089,46.884)
C3': (52.498,154.774,48.549)
C1': (50.312,155.517,49.108)
C5': (53.616,156.709,49.804)
O6: (47.553,157.907,44.358)
O4': (51.242,156.274,49.862)
C8: (50.167,157.639,47.735)
C2: (47.154,154.889,46.172)
C6: (47.735,157.080,45.253)
C5: (48.643,157.136,46.332)
C4: (48.732,156.057,47.188)
P: (54.610,158.579,48.247)
C4': (52.550,155.643,49.797)
C2': (51.051,154.294,48.552)
O2': (50.838,153.214,49.425)
N1: (47.010,155.899,45.260)
N2: (46.351,153.832,46.014)
N3: (48.023,154.912,47.169)
N7: (49.536,158.133,46.702)
N9: (49.752,156.373,48.067)
O5': (53.512,157.493,48.614)
O3': (53.447,153.707,48.642)
Image (generated by PyMOL):