Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2398:2394
Extra
PDB:
ATOM 1 O3' G A 397 -47.028 74.496 69.410 1.00 61.37 O
ATOM 2 P A A 398 -45.503 73.948 69.575 1.00 62.89 P
ATOM 3 OP1 A A 398 -45.319 73.600 71.006 1.00 62.43 O
ATOM 4 OP2 A A 398 -44.575 74.933 68.959 1.00 63.17 O
ATOM 5 O5' A A 398 -45.515 72.620 68.723 1.00 62.44 O
ATOM 6 C5' A A 398 -46.275 72.519 67.538 1.00 62.89 C
ATOM 7 C4' A A 398 -45.840 71.343 66.708 1.00 62.39 C
ATOM 8 O4' A A 398 -45.679 71.792 65.344 1.00 62.84 O
ATOM 9 C3' A A 398 -44.507 70.703 67.116 1.00 61.58 C
ATOM 10 O3' A A 398 -44.553 69.280 66.907 1.00 61.03 O
ATOM 11 C2' A A 398 -43.516 71.345 66.142 1.00 61.76 C
ATOM 12 O2' A A 398 -42.378 70.562 65.864 1.00 61.13 O
ATOM 13 C1' A A 398 -44.374 71.537 64.896 1.00 62.40 C
ATOM 14 N9 A A 398 -43.958 72.653 64.045 1.00 62.98 N
ATOM 15 C8 A A 398 -43.099 73.678 64.323 1.00 63.12 C
ATOM 16 N7 A A 398 -42.944 74.497 63.307 1.00 63.72 N
ATOM 17 C5 A A 398 -43.741 73.966 62.305 1.00 63.98 C
ATOM 18 C6 A A 398 -44.015 74.354 60.982 1.00 64.64 C
ATOM 19 N6 A A 398 -43.481 75.413 60.379 1.00 65.16 N
ATOM 20 N1 A A 398 -44.884 73.616 60.271 1.00 64.79 N
ATOM 21 C2 A A 398 -45.411 72.547 60.866 1.00 64.29 C
ATOM 22 N3 A A 398 -45.215 72.074 62.093 1.00 63.66 N
ATOM 23 C4 A A 398 -44.370 72.842 62.763 1.00 63.54 C
ATOM 24 P A A 399 -45.131 68.282 68.054 1.00 63.72 P
ATOM 25 OP1 A A 399 -45.499 67.012 67.384 1.00 63.47 O
ATOM 26 OP2 A A 399 -46.176 69.026 68.819 1.00 64.23 O
ATOM 27 O5' A A 399 -43.891 68.041 69.001 1.00 63.06 O
TER
ATOM 1 O3' C B 393 -34.482 79.837 64.255 1.00 63.96 O
ATOM 2 P U B 394 -35.602 80.822 64.820 1.00 66.79 P
ATOM 3 OP1 U B 394 -35.059 82.192 64.705 1.00 67.46 O
ATOM 4 OP2 U B 394 -36.000 80.312 66.158 1.00 66.31 O
ATOM 5 O5' U B 394 -36.808 80.632 63.788 1.00 67.22 O
ATOM 6 C5' U B 394 -36.879 81.397 62.594 1.00 67.96 C
ATOM 7 C4' U B 394 -38.109 81.054 61.797 1.00 68.30 C
ATOM 8 O4' U B 394 -38.219 79.621 61.660 1.00 67.59 O
ATOM 9 C3' U B 394 -39.428 81.457 62.427 1.00 68.70 C
ATOM 10 O3' U B 394 -39.735 82.805 62.231 1.00 69.60 O
ATOM 11 C2' U B 394 -40.419 80.512 61.795 1.00 68.64 C
ATOM 12 O2' U B 394 -40.762 80.947 60.492 1.00 69.35 O
ATOM 13 C1' U B 394 -39.581 79.244 61.689 1.00 67.75 C
ATOM 14 N1 U B 394 -39.795 78.358 62.842 1.00 67.02 N
ATOM 15 C2 U B 394 -40.805 77.431 62.710 1.00 66.87 C
ATOM 16 O2 U B 394 -41.469 77.356 61.693 1.00 67.30 O
ATOM 17 N3 U B 394 -41.003 76.594 63.778 1.00 66.22 N
ATOM 18 C4 U B 394 -40.284 76.607 64.941 1.00 65.74 C
ATOM 19 O4 U B 394 -40.564 75.801 65.818 1.00 65.22 O
ATOM 20 C5 U B 394 -39.258 77.602 65.007 1.00 65.95 C
ATOM 21 C6 U B 394 -39.043 78.432 63.982 1.00 66.57 C
ATOM 22 P G B 395 -39.978 83.726 63.507 1.00 69.87 P
ATOM 23 OP1 G B 395 -39.942 85.140 63.040 1.00 70.82 O
ATOM 24 OP2 G B 395 -39.004 83.280 64.559 1.00 69.08 O
ATOM 25 O5' G B 395 -41.460 83.327 63.932 1.00 69.96 O
TER
ATOM 2 P A A 398 -45.503 73.948 69.575 1.00 62.89 P
ATOM 3 OP1 A A 398 -45.319 73.600 71.006 1.00 62.43 O
ATOM 4 OP2 A A 398 -44.575 74.933 68.959 1.00 63.17 O
ATOM 5 O5' A A 398 -45.515 72.620 68.723 1.00 62.44 O
ATOM 6 C5' A A 398 -46.275 72.519 67.538 1.00 62.89 C
ATOM 7 C4' A A 398 -45.840 71.343 66.708 1.00 62.39 C
ATOM 8 O4' A A 398 -45.679 71.792 65.344 1.00 62.84 O
ATOM 9 C3' A A 398 -44.507 70.703 67.116 1.00 61.58 C
ATOM 10 O3' A A 398 -44.553 69.280 66.907 1.00 61.03 O
ATOM 11 C2' A A 398 -43.516 71.345 66.142 1.00 61.76 C
ATOM 12 O2' A A 398 -42.378 70.562 65.864 1.00 61.13 O
ATOM 13 C1' A A 398 -44.374 71.537 64.896 1.00 62.40 C
ATOM 14 N9 A A 398 -43.958 72.653 64.045 1.00 62.98 N
ATOM 15 C8 A A 398 -43.099 73.678 64.323 1.00 63.12 C
ATOM 16 N7 A A 398 -42.944 74.497 63.307 1.00 63.72 N
ATOM 17 C5 A A 398 -43.741 73.966 62.305 1.00 63.98 C
ATOM 18 C6 A A 398 -44.015 74.354 60.982 1.00 64.64 C
ATOM 19 N6 A A 398 -43.481 75.413 60.379 1.00 65.16 N
ATOM 20 N1 A A 398 -44.884 73.616 60.271 1.00 64.79 N
ATOM 21 C2 A A 398 -45.411 72.547 60.866 1.00 64.29 C
ATOM 22 N3 A A 398 -45.215 72.074 62.093 1.00 63.66 N
ATOM 23 C4 A A 398 -44.370 72.842 62.763 1.00 63.54 C
ATOM 24 P A A 399 -45.131 68.282 68.054 1.00 63.72 P
ATOM 25 OP1 A A 399 -45.499 67.012 67.384 1.00 63.47 O
ATOM 26 OP2 A A 399 -46.176 69.026 68.819 1.00 64.23 O
ATOM 27 O5' A A 399 -43.891 68.041 69.001 1.00 63.06 O
TER
ATOM 1 O3' C B 393 -34.482 79.837 64.255 1.00 63.96 O
ATOM 2 P U B 394 -35.602 80.822 64.820 1.00 66.79 P
ATOM 3 OP1 U B 394 -35.059 82.192 64.705 1.00 67.46 O
ATOM 4 OP2 U B 394 -36.000 80.312 66.158 1.00 66.31 O
ATOM 5 O5' U B 394 -36.808 80.632 63.788 1.00 67.22 O
ATOM 6 C5' U B 394 -36.879 81.397 62.594 1.00 67.96 C
ATOM 7 C4' U B 394 -38.109 81.054 61.797 1.00 68.30 C
ATOM 8 O4' U B 394 -38.219 79.621 61.660 1.00 67.59 O
ATOM 9 C3' U B 394 -39.428 81.457 62.427 1.00 68.70 C
ATOM 10 O3' U B 394 -39.735 82.805 62.231 1.00 69.60 O
ATOM 11 C2' U B 394 -40.419 80.512 61.795 1.00 68.64 C
ATOM 12 O2' U B 394 -40.762 80.947 60.492 1.00 69.35 O
ATOM 13 C1' U B 394 -39.581 79.244 61.689 1.00 67.75 C
ATOM 14 N1 U B 394 -39.795 78.358 62.842 1.00 67.02 N
ATOM 15 C2 U B 394 -40.805 77.431 62.710 1.00 66.87 C
ATOM 16 O2 U B 394 -41.469 77.356 61.693 1.00 67.30 O
ATOM 17 N3 U B 394 -41.003 76.594 63.778 1.00 66.22 N
ATOM 18 C4 U B 394 -40.284 76.607 64.941 1.00 65.74 C
ATOM 19 O4 U B 394 -40.564 75.801 65.818 1.00 65.22 O
ATOM 20 C5 U B 394 -39.258 77.602 65.007 1.00 65.95 C
ATOM 21 C6 U B 394 -39.043 78.432 63.982 1.00 66.57 C
ATOM 22 P G B 395 -39.978 83.726 63.507 1.00 69.87 P
ATOM 23 OP1 G B 395 -39.942 85.140 63.040 1.00 70.82 O
ATOM 24 OP2 G B 395 -39.004 83.280 64.559 1.00 69.08 O
ATOM 25 O5' G B 395 -41.460 83.327 63.932 1.00 69.96 O
TER
Atoms:
OP1: (-45.319,73.600,71.006)
OP2: (-44.575,74.933,68.959)
C3': (-44.507,70.703,67.116)
C1': (-44.374,71.537,64.896)
C5': (-46.275,72.519,67.538)
O4': (-45.679,71.792,65.344)
C8: (-43.099,73.678,64.323)
O2': (-42.378,70.562,65.864)
C6: (-44.015,74.354,60.982)
C5: (-43.741,73.966,62.305)
C4: (-44.370,72.842,62.763)
P: (-45.503,73.948,69.575)
C4': (-45.840,71.343,66.708)
C2': (-43.516,71.345,66.142)
C2: (-45.411,72.547,60.866)
N1: (-44.884,73.616,60.271)
N3: (-45.215,72.074,62.093)
N6: (-43.481,75.413,60.379)
N7: (-42.944,74.497,63.307)
N9: (-43.958,72.653,64.045)
O5': (-45.515,72.620,68.723)
O3': (-44.553,69.280,66.907)
OP2: (-44.575,74.933,68.959)
C3': (-44.507,70.703,67.116)
C1': (-44.374,71.537,64.896)
C5': (-46.275,72.519,67.538)
O4': (-45.679,71.792,65.344)
C8: (-43.099,73.678,64.323)
O2': (-42.378,70.562,65.864)
C6: (-44.015,74.354,60.982)
C5: (-43.741,73.966,62.305)
C4: (-44.370,72.842,62.763)
P: (-45.503,73.948,69.575)
C4': (-45.840,71.343,66.708)
C2': (-43.516,71.345,66.142)
C2: (-45.411,72.547,60.866)
N1: (-44.884,73.616,60.271)
N3: (-45.215,72.074,62.093)
N6: (-43.481,75.413,60.379)
N7: (-42.944,74.497,63.307)
N9: (-43.958,72.653,64.045)
O5': (-45.515,72.620,68.723)
O3': (-44.553,69.280,66.907)
C4: (-40.284,76.607,64.941)
N3: (-41.003,76.594,63.778)
OP1: (-35.059,82.192,64.705)
OP2: (-36.000,80.312,66.158)
C2: (-40.805,77.431,62.710)
C1': (-39.581,79.244,61.689)
C3': (-39.428,81.457,62.427)
O5': (-36.808,80.632,63.788)
O4': (-38.219,79.621,61.660)
C5': (-36.879,81.397,62.594)
P: (-35.602,80.822,64.820)
C4': (-38.109,81.054,61.797)
C2': (-40.419,80.512,61.795)
O2': (-40.762,80.947,60.492)
N1: (-39.795,78.358,62.842)
O4: (-40.564,75.801,65.818)
O2: (-41.469,77.356,61.693)
C6: (-39.043,78.432,63.982)
C5: (-39.258,77.602,65.007)
O3': (-39.735,82.805,62.231)
N3: (-41.003,76.594,63.778)
OP1: (-35.059,82.192,64.705)
OP2: (-36.000,80.312,66.158)
C2: (-40.805,77.431,62.710)
C1': (-39.581,79.244,61.689)
C3': (-39.428,81.457,62.427)
O5': (-36.808,80.632,63.788)
O4': (-38.219,79.621,61.660)
C5': (-36.879,81.397,62.594)
P: (-35.602,80.822,64.820)
C4': (-38.109,81.054,61.797)
C2': (-40.419,80.512,61.795)
O2': (-40.762,80.947,60.492)
N1: (-39.795,78.358,62.842)
O4: (-40.564,75.801,65.818)
O2: (-41.469,77.356,61.693)
C6: (-39.043,78.432,63.982)
C5: (-39.258,77.602,65.007)
O3': (-39.735,82.805,62.231)
Image (generated by PyMOL):