ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2DRB:B29:B28

Extra

PDB:
ATOM 1 O3' G A 28 16.432 -24.163 -31.306 1.00 43.97 O
ATOM 2 P C A 29 16.135 -22.859 -32.195 1.00 43.94 P
ATOM 3 OP1 C A 29 14.671 -22.828 -32.448 1.00 44.53 O
ATOM 4 OP2 C A 29 17.087 -22.828 -33.346 1.00 39.74 O
ATOM 5 O5' C A 29 16.497 -21.671 -31.201 1.00 39.68 O
ATOM 6 C5' C A 29 15.952 -21.654 -29.895 1.00 34.80 C
ATOM 7 C4' C A 29 16.807 -20.819 -28.989 1.00 32.07 C
ATOM 8 O4' C A 29 18.132 -21.406 -28.901 1.00 30.45 O
ATOM 9 C3' C A 29 17.094 -19.408 -29.460 1.00 31.19 C
ATOM 10 O3' C A 29 15.986 -18.544 -29.215 1.00 28.63 O
ATOM 11 C2' C A 29 18.312 -19.067 -28.610 1.00 30.82 C
ATOM 12 O2' C A 29 17.972 -18.784 -27.271 1.00 30.60 O
ATOM 13 C1' C A 29 19.086 -20.387 -28.653 1.00 28.79 C
ATOM 14 N1 C A 29 20.104 -20.426 -29.719 1.00 27.04 N
ATOM 15 C2 C A 29 21.243 -19.612 -29.598 1.00 26.16 C
ATOM 16 O2 C A 29 21.401 -18.942 -28.564 1.00 24.70 O
ATOM 17 N3 C A 29 22.143 -19.586 -30.605 1.00 24.27 N
ATOM 18 C4 C A 29 21.956 -20.338 -31.687 1.00 24.12 C
ATOM 19 N4 C A 29 22.855 -20.250 -32.663 1.00 24.00 N
ATOM 20 C5 C A 29 20.835 -21.208 -31.817 1.00 24.46 C
ATOM 21 C6 C A 29 19.941 -21.221 -30.818 1.00 26.05 C
ATOM 22 P C A 30 15.842 -17.175 -30.046 1.00 26.41 P
ATOM 23 OP1 C A 30 14.605 -16.479 -29.602 1.00 26.23 O
ATOM 24 OP2 C A 30 16.063 -17.434 -31.491 1.00 23.73 O
ATOM 25 O5' C A 30 17.077 -16.320 -29.543 1.00 28.02 O
TER

ATOM 1 O3' G B 27 19.466 -29.274 -34.914 1.00 56.38 O
ATOM 2 P G B 28 18.835 -27.799 -35.032 1.00 55.98 P
ATOM 3 OP1 G B 28 17.600 -27.913 -35.842 1.00 55.63 O
ATOM 4 OP2 G B 28 19.909 -26.848 -35.450 1.00 53.76 O
ATOM 5 O5' G B 28 18.408 -27.460 -33.536 1.00 51.75 O
ATOM 6 C5' G B 28 18.117 -26.132 -33.155 1.00 47.78 C
ATOM 7 C4' G B 28 17.868 -26.058 -31.672 1.00 45.87 C
ATOM 8 O4' G B 28 18.993 -26.628 -30.950 1.00 44.01 O
ATOM 9 C3' G B 28 17.765 -24.627 -31.181 1.00 44.63 C
ATOM 10 O3' G B 28 16.432 -24.163 -31.306 1.00 43.97 O
ATOM 11 C2' G B 28 18.277 -24.728 -29.754 1.00 42.64 C
ATOM 12 O2' G B 28 17.327 -25.225 -28.839 1.00 42.02 O
ATOM 13 C1' G B 28 19.416 -25.728 -29.940 1.00 41.89 C
ATOM 14 N9 G B 28 20.628 -25.079 -30.430 1.00 40.18 N
ATOM 15 C8 G B 28 21.244 -25.299 -31.641 1.00 39.63 C
ATOM 16 N7 G B 28 22.316 -24.572 -31.810 1.00 38.66 N
ATOM 17 C5 G B 28 22.414 -23.829 -30.639 1.00 37.27 C
ATOM 18 C6 G B 28 23.373 -22.868 -30.245 1.00 35.96 C
ATOM 19 O6 G B 28 24.365 -22.473 -30.866 1.00 34.54 O
ATOM 20 N1 G B 28 23.089 -22.349 -28.988 1.00 35.69 N
ATOM 21 C2 G B 28 22.020 -22.712 -28.209 1.00 34.82 C
ATOM 22 N2 G B 28 21.912 -22.092 -27.028 1.00 32.70 N
ATOM 23 N3 G B 28 21.123 -23.614 -28.562 1.00 34.60 N
ATOM 24 C4 G B 28 21.379 -24.127 -29.780 1.00 36.84 C
ATOM 25 P C B 29 16.135 -22.859 -32.195 1.00 43.94 P
ATOM 26 OP1 C B 29 14.671 -22.828 -32.448 1.00 44.53 O
ATOM 27 OP2 C B 29 17.087 -22.828 -33.346 1.00 39.74 O
ATOM 28 O5' C B 29 16.497 -21.671 -31.201 1.00 39.68 O
TER

Atoms:
C2: (21.243,-19.612,-29.598)
OP1: (14.671,-22.828,-32.448)
OP2: (17.087,-22.828,-33.346)
C4: (21.956,-20.338,-31.687)
O5': (16.497,-21.671,-31.201)
C3': (17.094,-19.408,-29.460)
C1': (19.086,-20.387,-28.653)
O4': (18.132,-21.406,-28.901)
C5': (15.952,-21.654,-29.895)
P: (16.135,-22.859,-32.195)
O2: (21.401,-18.942,-28.564)
C4': (16.807,-20.819,-28.989)
C2': (18.312,-19.067,-28.610)
O2': (17.972,-18.784,-27.271)
N1: (20.104,-20.426,-29.719)
N3: (22.143,-19.586,-30.605)
N4: (22.855,-20.250,-32.663)
C6: (19.941,-21.221,-30.818)
C5: (20.835,-21.208,-31.817)
O3': (15.986,-18.544,-29.215)
OP1: (17.600,-27.913,-35.842)
OP2: (19.909,-26.848,-35.450)
C3': (17.765,-24.627,-31.181)
C1': (19.416,-25.728,-29.940)
C5': (18.117,-26.132,-33.155)
O6: (24.365,-22.473,-30.866)
O4': (18.993,-26.628,-30.950)
C8: (21.244,-25.299,-31.641)
C2: (22.020,-22.712,-28.209)
C6: (23.373,-22.868,-30.245)
C5: (22.414,-23.829,-30.639)
C4: (21.379,-24.127,-29.780)
P: (18.835,-27.799,-35.032)
C4': (17.868,-26.058,-31.672)
C2': (18.277,-24.728,-29.754)
O2': (17.327,-25.225,-28.839)
N1: (23.089,-22.349,-28.988)
N2: (21.912,-22.092,-27.028)
N3: (21.123,-23.614,-28.562)
N7: (22.316,-24.572,-31.810)
N9: (20.628,-25.079,-30.430)
O5': (18.408,-27.460,-33.536)
O3': (16.432,-24.163,-31.306)
Image (generated by PyMOL):
PyMOL image
show in jmol