Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XSL:B6:B5
Extra
PDB:
ATOM 1 O3' G A 5 -3.022 9.276 -2.429 1.00 19.19 O
ATOM 2 P C A 6 -2.418 9.361 -0.986 1.00 23.45 P
ATOM 3 OP1 C A 6 -2.426 10.776 -0.587 1.00 25.81 O
ATOM 4 OP2 C A 6 -1.230 8.560 -0.899 1.00 24.69 O
ATOM 5 O5' C A 6 -3.494 8.532 -0.227 1.00 22.14 O
ATOM 6 C5' C A 6 -4.786 9.125 -0.140 1.00 19.16 C
ATOM 7 C4' C A 6 -5.723 8.320 0.750 1.00 22.13 C
ATOM 8 O4' C A 6 -5.842 7.057 0.077 1.00 20.21 O
ATOM 9 C3' C A 6 -5.214 8.045 2.168 1.00 22.58 C
ATOM 10 O3' C A 6 -5.440 9.040 3.131 1.00 23.37 O
ATOM 11 C2' C A 6 -6.041 6.806 2.458 1.00 22.84 C
ATOM 12 O2' C A 6 -7.371 7.099 2.836 1.00 24.06 O
ATOM 13 C1' C A 6 -6.082 6.107 1.093 1.00 21.99 C
ATOM 14 N1 C A 6 -5.060 5.080 0.971 1.00 20.04 N
ATOM 15 C2 C A 6 -5.268 3.863 1.590 1.00 20.53 C
ATOM 16 O2 C A 6 -6.322 3.535 2.153 1.00 22.57 O
ATOM 17 N3 C A 6 -4.296 2.953 1.453 1.00 25.20 N
ATOM 18 C4 C A 6 -3.148 3.199 0.889 1.00 23.63 C
ATOM 19 N4 C A 6 -2.315 2.174 0.882 1.00 29.14 N
ATOM 20 C5 C A 6 -2.852 4.437 0.264 1.00 22.89 C
ATOM 21 C6 C A 6 -3.860 5.331 0.367 1.00 21.91 C
TER
ATOM 1 O3' C B 4 0.244 7.016 -7.148 1.00 20.09 O
ATOM 2 P G B 5 0.587 7.325 -5.615 1.00 21.46 P
ATOM 3 OP1 G B 5 1.212 8.668 -5.635 1.00 25.92 O
ATOM 4 OP2 G B 5 1.187 6.217 -4.977 1.00 19.52 O
ATOM 5 O5' G B 5 -0.873 7.379 -4.982 1.00 22.10 O
ATOM 6 C5' G B 5 -1.740 8.417 -5.264 1.00 21.00 C
ATOM 7 C4' G B 5 -3.088 8.179 -4.638 1.00 22.75 C
ATOM 8 O4' G B 5 -3.629 6.923 -5.163 1.00 21.19 O
ATOM 9 C3' G B 5 -3.087 8.025 -3.142 1.00 17.92 C
ATOM 10 O3' G B 5 -3.022 9.276 -2.429 1.00 19.19 O
ATOM 11 C2' G B 5 -4.498 7.386 -3.014 1.00 20.15 C
ATOM 12 O2' G B 5 -5.577 8.257 -3.153 1.00 22.06 O
ATOM 13 C1' G B 5 -4.491 6.425 -4.165 1.00 19.16 C
ATOM 14 N9 G B 5 -3.901 5.184 -3.745 1.00 18.71 N
ATOM 15 C8 G B 5 -2.675 4.636 -4.030 1.00 20.20 C
ATOM 16 N7 G B 5 -2.493 3.461 -3.424 1.00 20.92 N
ATOM 17 C5 G B 5 -3.709 3.158 -2.846 1.00 20.36 C
ATOM 18 C6 G B 5 -4.111 2.001 -2.092 1.00 20.09 C
ATOM 19 O6 G B 5 -3.444 0.973 -1.853 1.00 20.71 O
ATOM 20 N1 G B 5 -5.402 2.157 -1.592 1.00 18.60 N
ATOM 21 C2 G B 5 -6.158 3.264 -1.844 1.00 20.15 C
ATOM 22 N2 G B 5 -7.394 3.336 -1.346 1.00 24.99 N
ATOM 23 N3 G B 5 -5.805 4.284 -2.592 1.00 18.78 N
ATOM 24 C4 G B 5 -4.556 4.206 -3.004 1.00 19.06 C
ATOM 25 P C B 6 -2.418 9.361 -0.986 1.00 23.45 P
ATOM 26 OP1 C B 6 -2.426 10.776 -0.587 1.00 25.81 O
ATOM 27 OP2 C B 6 -1.230 8.560 -0.899 1.00 24.69 O
ATOM 28 O5' C B 6 -3.494 8.532 -0.227 1.00 22.14 O
TER
ATOM 2 P C A 6 -2.418 9.361 -0.986 1.00 23.45 P
ATOM 3 OP1 C A 6 -2.426 10.776 -0.587 1.00 25.81 O
ATOM 4 OP2 C A 6 -1.230 8.560 -0.899 1.00 24.69 O
ATOM 5 O5' C A 6 -3.494 8.532 -0.227 1.00 22.14 O
ATOM 6 C5' C A 6 -4.786 9.125 -0.140 1.00 19.16 C
ATOM 7 C4' C A 6 -5.723 8.320 0.750 1.00 22.13 C
ATOM 8 O4' C A 6 -5.842 7.057 0.077 1.00 20.21 O
ATOM 9 C3' C A 6 -5.214 8.045 2.168 1.00 22.58 C
ATOM 10 O3' C A 6 -5.440 9.040 3.131 1.00 23.37 O
ATOM 11 C2' C A 6 -6.041 6.806 2.458 1.00 22.84 C
ATOM 12 O2' C A 6 -7.371 7.099 2.836 1.00 24.06 O
ATOM 13 C1' C A 6 -6.082 6.107 1.093 1.00 21.99 C
ATOM 14 N1 C A 6 -5.060 5.080 0.971 1.00 20.04 N
ATOM 15 C2 C A 6 -5.268 3.863 1.590 1.00 20.53 C
ATOM 16 O2 C A 6 -6.322 3.535 2.153 1.00 22.57 O
ATOM 17 N3 C A 6 -4.296 2.953 1.453 1.00 25.20 N
ATOM 18 C4 C A 6 -3.148 3.199 0.889 1.00 23.63 C
ATOM 19 N4 C A 6 -2.315 2.174 0.882 1.00 29.14 N
ATOM 20 C5 C A 6 -2.852 4.437 0.264 1.00 22.89 C
ATOM 21 C6 C A 6 -3.860 5.331 0.367 1.00 21.91 C
TER
ATOM 1 O3' C B 4 0.244 7.016 -7.148 1.00 20.09 O
ATOM 2 P G B 5 0.587 7.325 -5.615 1.00 21.46 P
ATOM 3 OP1 G B 5 1.212 8.668 -5.635 1.00 25.92 O
ATOM 4 OP2 G B 5 1.187 6.217 -4.977 1.00 19.52 O
ATOM 5 O5' G B 5 -0.873 7.379 -4.982 1.00 22.10 O
ATOM 6 C5' G B 5 -1.740 8.417 -5.264 1.00 21.00 C
ATOM 7 C4' G B 5 -3.088 8.179 -4.638 1.00 22.75 C
ATOM 8 O4' G B 5 -3.629 6.923 -5.163 1.00 21.19 O
ATOM 9 C3' G B 5 -3.087 8.025 -3.142 1.00 17.92 C
ATOM 10 O3' G B 5 -3.022 9.276 -2.429 1.00 19.19 O
ATOM 11 C2' G B 5 -4.498 7.386 -3.014 1.00 20.15 C
ATOM 12 O2' G B 5 -5.577 8.257 -3.153 1.00 22.06 O
ATOM 13 C1' G B 5 -4.491 6.425 -4.165 1.00 19.16 C
ATOM 14 N9 G B 5 -3.901 5.184 -3.745 1.00 18.71 N
ATOM 15 C8 G B 5 -2.675 4.636 -4.030 1.00 20.20 C
ATOM 16 N7 G B 5 -2.493 3.461 -3.424 1.00 20.92 N
ATOM 17 C5 G B 5 -3.709 3.158 -2.846 1.00 20.36 C
ATOM 18 C6 G B 5 -4.111 2.001 -2.092 1.00 20.09 C
ATOM 19 O6 G B 5 -3.444 0.973 -1.853 1.00 20.71 O
ATOM 20 N1 G B 5 -5.402 2.157 -1.592 1.00 18.60 N
ATOM 21 C2 G B 5 -6.158 3.264 -1.844 1.00 20.15 C
ATOM 22 N2 G B 5 -7.394 3.336 -1.346 1.00 24.99 N
ATOM 23 N3 G B 5 -5.805 4.284 -2.592 1.00 18.78 N
ATOM 24 C4 G B 5 -4.556 4.206 -3.004 1.00 19.06 C
ATOM 25 P C B 6 -2.418 9.361 -0.986 1.00 23.45 P
ATOM 26 OP1 C B 6 -2.426 10.776 -0.587 1.00 25.81 O
ATOM 27 OP2 C B 6 -1.230 8.560 -0.899 1.00 24.69 O
ATOM 28 O5' C B 6 -3.494 8.532 -0.227 1.00 22.14 O
TER
Atoms:
C2: (-5.268,3.863,1.590)
OP1: (-2.426,10.776,-0.587)
OP2: (-1.230,8.560,-0.899)
C4: (-3.148,3.199,0.889)
O5': (-3.494,8.532,-0.227)
C3': (-5.214,8.045,2.168)
C1': (-6.082,6.107,1.093)
O4': (-5.842,7.057,0.077)
C5': (-4.786,9.125,-0.140)
P: (-2.418,9.361,-0.986)
O2: (-6.322,3.535,2.153)
C4': (-5.723,8.320,0.750)
C2': (-6.041,6.806,2.458)
O2': (-7.371,7.099,2.836)
N1: (-5.060,5.080,0.971)
N3: (-4.296,2.953,1.453)
N4: (-2.315,2.174,0.882)
C6: (-3.860,5.331,0.367)
C5: (-2.852,4.437,0.264)
O3': (-5.440,9.040,3.131)
OP1: (-2.426,10.776,-0.587)
OP2: (-1.230,8.560,-0.899)
C4: (-3.148,3.199,0.889)
O5': (-3.494,8.532,-0.227)
C3': (-5.214,8.045,2.168)
C1': (-6.082,6.107,1.093)
O4': (-5.842,7.057,0.077)
C5': (-4.786,9.125,-0.140)
P: (-2.418,9.361,-0.986)
O2: (-6.322,3.535,2.153)
C4': (-5.723,8.320,0.750)
C2': (-6.041,6.806,2.458)
O2': (-7.371,7.099,2.836)
N1: (-5.060,5.080,0.971)
N3: (-4.296,2.953,1.453)
N4: (-2.315,2.174,0.882)
C6: (-3.860,5.331,0.367)
C5: (-2.852,4.437,0.264)
O3': (-5.440,9.040,3.131)
OP1: (1.212,8.668,-5.635)
OP2: (1.187,6.217,-4.977)
C3': (-3.087,8.025,-3.142)
C1': (-4.491,6.425,-4.165)
C5': (-1.740,8.417,-5.264)
O6: (-3.444,0.973,-1.853)
O4': (-3.629,6.923,-5.163)
C8: (-2.675,4.636,-4.030)
C2: (-6.158,3.264,-1.844)
C6: (-4.111,2.001,-2.092)
C5: (-3.709,3.158,-2.846)
C4: (-4.556,4.206,-3.004)
P: (0.587,7.325,-5.615)
C4': (-3.088,8.179,-4.638)
C2': (-4.498,7.386,-3.014)
O2': (-5.577,8.257,-3.153)
N1: (-5.402,2.157,-1.592)
N2: (-7.394,3.336,-1.346)
N3: (-5.805,4.284,-2.592)
N7: (-2.493,3.461,-3.424)
N9: (-3.901,5.184,-3.745)
O5': (-0.873,7.379,-4.982)
O3': (-3.022,9.276,-2.429)
OP2: (1.187,6.217,-4.977)
C3': (-3.087,8.025,-3.142)
C1': (-4.491,6.425,-4.165)
C5': (-1.740,8.417,-5.264)
O6: (-3.444,0.973,-1.853)
O4': (-3.629,6.923,-5.163)
C8: (-2.675,4.636,-4.030)
C2: (-6.158,3.264,-1.844)
C6: (-4.111,2.001,-2.092)
C5: (-3.709,3.158,-2.846)
C4: (-4.556,4.206,-3.004)
P: (0.587,7.325,-5.615)
C4': (-3.088,8.179,-4.638)
C2': (-4.498,7.386,-3.014)
O2': (-5.577,8.257,-3.153)
N1: (-5.402,2.157,-1.592)
N2: (-7.394,3.336,-1.346)
N3: (-5.805,4.284,-2.592)
N7: (-2.493,3.461,-3.424)
N9: (-3.901,5.184,-3.745)
O5': (-0.873,7.379,-4.982)
O3': (-3.022,9.276,-2.429)
Image (generated by PyMOL):