Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0464:0453
Extra
PDB:
ATOM 1 O3' G A 463 54.738 137.122 60.192 1.00 31.61 O
ATOM 2 P A A 464 53.703 136.655 59.054 1.00 32.80 P
ATOM 3 OP1 A A 464 52.750 135.713 59.686 1.00 32.32 O
ATOM 4 OP2 A A 464 54.443 136.241 57.830 1.00 31.16 O
ATOM 5 O5' A A 464 52.922 137.997 58.726 1.00 29.81 O
ATOM 6 C5' A A 464 51.555 138.146 59.076 1.00 27.20 C
ATOM 7 C4' A A 464 51.440 138.691 60.469 1.00 26.36 C
ATOM 8 O4' A A 464 52.336 139.813 60.629 1.00 25.38 O
ATOM 9 C3' A A 464 50.066 139.256 60.750 1.00 27.94 C
ATOM 10 O3' A A 464 49.177 138.235 61.138 1.00 30.16 O
ATOM 11 C2' A A 464 50.328 140.298 61.822 1.00 26.69 C
ATOM 12 O2' A A 464 50.364 139.765 63.133 1.00 25.83 O
ATOM 13 C1' A A 464 51.688 140.839 61.369 1.00 25.30 C
ATOM 14 N9 A A 464 51.578 142.000 60.491 1.00 23.94 N
ATOM 15 C8 A A 464 52.023 142.103 59.199 1.00 23.83 C
ATOM 16 N7 A A 464 51.791 143.266 58.651 1.00 23.39 N
ATOM 17 C5 A A 464 51.156 143.981 59.650 1.00 22.76 C
ATOM 18 C6 A A 464 50.670 145.285 59.697 1.00 22.87 C
ATOM 19 N6 A A 464 50.772 146.144 58.681 1.00 23.22 N
ATOM 20 N1 A A 464 50.075 145.689 60.836 1.00 22.32 N
ATOM 21 C2 A A 464 49.996 144.828 61.858 1.00 23.53 C
ATOM 22 N3 A A 464 50.433 143.579 61.940 1.00 22.78 N
ATOM 23 C4 A A 464 51.010 143.211 60.787 1.00 23.50 C
ATOM 24 P A A 465 47.811 138.056 60.344 1.00 31.06 P
ATOM 25 OP1 A A 465 47.248 136.732 60.703 1.00 30.55 O
ATOM 26 OP2 A A 465 48.062 138.391 58.921 1.00 29.56 O
ATOM 27 O5' A A 465 46.911 139.189 60.988 1.00 31.35 O
TER
ATOM 1 O3' G B 452 56.355 143.614 51.551 1.00 41.61 O
ATOM 2 P U B 453 57.369 144.736 52.090 1.00 44.03 P
ATOM 3 OP1 U B 453 58.187 145.237 50.954 1.00 41.83 O
ATOM 4 OP2 U B 453 58.049 144.210 53.310 1.00 43.34 O
ATOM 5 O5' U B 453 56.382 145.888 52.559 1.00 39.82 O
ATOM 6 C5' U B 453 55.723 146.730 51.607 1.00 38.89 C
ATOM 7 C4' U B 453 54.533 147.378 52.252 1.00 39.42 C
ATOM 8 O4' U B 453 53.476 146.401 52.385 1.00 40.46 O
ATOM 9 C3' U B 453 54.810 147.855 53.663 1.00 41.09 C
ATOM 10 O3' U B 453 55.388 149.157 53.654 1.00 42.22 O
ATOM 11 C2' U B 453 53.438 147.773 54.316 1.00 40.60 C
ATOM 12 O2' U B 453 52.605 148.855 53.965 1.00 41.79 O
ATOM 13 C1' U B 453 52.873 146.510 53.662 1.00 39.59 C
ATOM 14 N1 U B 453 53.129 145.255 54.391 1.00 37.84 N
ATOM 15 C2 U B 453 52.420 145.011 55.555 1.00 36.64 C
ATOM 16 O2 U B 453 51.610 145.789 56.018 1.00 37.25 O
ATOM 17 N3 U B 453 52.704 143.817 56.164 1.00 36.44 N
ATOM 18 C4 U B 453 53.610 142.863 55.751 1.00 37.80 C
ATOM 19 O4 U B 453 53.811 141.870 56.456 1.00 36.32 O
ATOM 20 C5 U B 453 54.302 143.186 54.543 1.00 39.31 C
ATOM 21 C6 U B 453 54.048 144.340 53.921 1.00 38.59 C
ATOM 22 P A B 454 56.567 149.514 54.684 1.00 42.60 P
ATOM 23 OP1 A B 454 56.910 150.929 54.425 1.00 43.04 O
ATOM 24 OP2 A B 454 57.629 148.473 54.628 1.00 39.80 O
ATOM 25 O5' A B 454 55.854 149.452 56.102 1.00 39.72 O
TER
ATOM 2 P A A 464 53.703 136.655 59.054 1.00 32.80 P
ATOM 3 OP1 A A 464 52.750 135.713 59.686 1.00 32.32 O
ATOM 4 OP2 A A 464 54.443 136.241 57.830 1.00 31.16 O
ATOM 5 O5' A A 464 52.922 137.997 58.726 1.00 29.81 O
ATOM 6 C5' A A 464 51.555 138.146 59.076 1.00 27.20 C
ATOM 7 C4' A A 464 51.440 138.691 60.469 1.00 26.36 C
ATOM 8 O4' A A 464 52.336 139.813 60.629 1.00 25.38 O
ATOM 9 C3' A A 464 50.066 139.256 60.750 1.00 27.94 C
ATOM 10 O3' A A 464 49.177 138.235 61.138 1.00 30.16 O
ATOM 11 C2' A A 464 50.328 140.298 61.822 1.00 26.69 C
ATOM 12 O2' A A 464 50.364 139.765 63.133 1.00 25.83 O
ATOM 13 C1' A A 464 51.688 140.839 61.369 1.00 25.30 C
ATOM 14 N9 A A 464 51.578 142.000 60.491 1.00 23.94 N
ATOM 15 C8 A A 464 52.023 142.103 59.199 1.00 23.83 C
ATOM 16 N7 A A 464 51.791 143.266 58.651 1.00 23.39 N
ATOM 17 C5 A A 464 51.156 143.981 59.650 1.00 22.76 C
ATOM 18 C6 A A 464 50.670 145.285 59.697 1.00 22.87 C
ATOM 19 N6 A A 464 50.772 146.144 58.681 1.00 23.22 N
ATOM 20 N1 A A 464 50.075 145.689 60.836 1.00 22.32 N
ATOM 21 C2 A A 464 49.996 144.828 61.858 1.00 23.53 C
ATOM 22 N3 A A 464 50.433 143.579 61.940 1.00 22.78 N
ATOM 23 C4 A A 464 51.010 143.211 60.787 1.00 23.50 C
ATOM 24 P A A 465 47.811 138.056 60.344 1.00 31.06 P
ATOM 25 OP1 A A 465 47.248 136.732 60.703 1.00 30.55 O
ATOM 26 OP2 A A 465 48.062 138.391 58.921 1.00 29.56 O
ATOM 27 O5' A A 465 46.911 139.189 60.988 1.00 31.35 O
TER
ATOM 1 O3' G B 452 56.355 143.614 51.551 1.00 41.61 O
ATOM 2 P U B 453 57.369 144.736 52.090 1.00 44.03 P
ATOM 3 OP1 U B 453 58.187 145.237 50.954 1.00 41.83 O
ATOM 4 OP2 U B 453 58.049 144.210 53.310 1.00 43.34 O
ATOM 5 O5' U B 453 56.382 145.888 52.559 1.00 39.82 O
ATOM 6 C5' U B 453 55.723 146.730 51.607 1.00 38.89 C
ATOM 7 C4' U B 453 54.533 147.378 52.252 1.00 39.42 C
ATOM 8 O4' U B 453 53.476 146.401 52.385 1.00 40.46 O
ATOM 9 C3' U B 453 54.810 147.855 53.663 1.00 41.09 C
ATOM 10 O3' U B 453 55.388 149.157 53.654 1.00 42.22 O
ATOM 11 C2' U B 453 53.438 147.773 54.316 1.00 40.60 C
ATOM 12 O2' U B 453 52.605 148.855 53.965 1.00 41.79 O
ATOM 13 C1' U B 453 52.873 146.510 53.662 1.00 39.59 C
ATOM 14 N1 U B 453 53.129 145.255 54.391 1.00 37.84 N
ATOM 15 C2 U B 453 52.420 145.011 55.555 1.00 36.64 C
ATOM 16 O2 U B 453 51.610 145.789 56.018 1.00 37.25 O
ATOM 17 N3 U B 453 52.704 143.817 56.164 1.00 36.44 N
ATOM 18 C4 U B 453 53.610 142.863 55.751 1.00 37.80 C
ATOM 19 O4 U B 453 53.811 141.870 56.456 1.00 36.32 O
ATOM 20 C5 U B 453 54.302 143.186 54.543 1.00 39.31 C
ATOM 21 C6 U B 453 54.048 144.340 53.921 1.00 38.59 C
ATOM 22 P A B 454 56.567 149.514 54.684 1.00 42.60 P
ATOM 23 OP1 A B 454 56.910 150.929 54.425 1.00 43.04 O
ATOM 24 OP2 A B 454 57.629 148.473 54.628 1.00 39.80 O
ATOM 25 O5' A B 454 55.854 149.452 56.102 1.00 39.72 O
TER
Atoms:
OP1: (52.750,135.713,59.686)
OP2: (54.443,136.241,57.830)
C3': (50.066,139.256,60.750)
C1': (51.688,140.839,61.369)
C5': (51.555,138.146,59.076)
O4': (52.336,139.813,60.629)
C8: (52.023,142.103,59.199)
O2': (50.364,139.765,63.133)
C6: (50.670,145.285,59.697)
C5: (51.156,143.981,59.650)
C4: (51.010,143.211,60.787)
P: (53.703,136.655,59.054)
C4': (51.440,138.691,60.469)
C2': (50.328,140.298,61.822)
C2: (49.996,144.828,61.858)
N1: (50.075,145.689,60.836)
N3: (50.433,143.579,61.940)
N6: (50.772,146.144,58.681)
N7: (51.791,143.266,58.651)
N9: (51.578,142.000,60.491)
O5': (52.922,137.997,58.726)
O3': (49.177,138.235,61.138)
OP2: (54.443,136.241,57.830)
C3': (50.066,139.256,60.750)
C1': (51.688,140.839,61.369)
C5': (51.555,138.146,59.076)
O4': (52.336,139.813,60.629)
C8: (52.023,142.103,59.199)
O2': (50.364,139.765,63.133)
C6: (50.670,145.285,59.697)
C5: (51.156,143.981,59.650)
C4: (51.010,143.211,60.787)
P: (53.703,136.655,59.054)
C4': (51.440,138.691,60.469)
C2': (50.328,140.298,61.822)
C2: (49.996,144.828,61.858)
N1: (50.075,145.689,60.836)
N3: (50.433,143.579,61.940)
N6: (50.772,146.144,58.681)
N7: (51.791,143.266,58.651)
N9: (51.578,142.000,60.491)
O5': (52.922,137.997,58.726)
O3': (49.177,138.235,61.138)
C4: (53.610,142.863,55.751)
N3: (52.704,143.817,56.164)
OP1: (58.187,145.237,50.954)
OP2: (58.049,144.210,53.310)
C2: (52.420,145.011,55.555)
C1': (52.873,146.510,53.662)
C3': (54.810,147.855,53.663)
O5': (56.382,145.888,52.559)
O4': (53.476,146.401,52.385)
C5': (55.723,146.730,51.607)
P: (57.369,144.736,52.090)
C4': (54.533,147.378,52.252)
C2': (53.438,147.773,54.316)
O2': (52.605,148.855,53.965)
N1: (53.129,145.255,54.391)
O4: (53.811,141.870,56.456)
O2: (51.610,145.789,56.018)
C6: (54.048,144.340,53.921)
C5: (54.302,143.186,54.543)
O3': (55.388,149.157,53.654)
N3: (52.704,143.817,56.164)
OP1: (58.187,145.237,50.954)
OP2: (58.049,144.210,53.310)
C2: (52.420,145.011,55.555)
C1': (52.873,146.510,53.662)
C3': (54.810,147.855,53.663)
O5': (56.382,145.888,52.559)
O4': (53.476,146.401,52.385)
C5': (55.723,146.730,51.607)
P: (57.369,144.736,52.090)
C4': (54.533,147.378,52.252)
C2': (53.438,147.773,54.316)
O2': (52.605,148.855,53.965)
N1: (53.129,145.255,54.391)
O4: (53.811,141.870,56.456)
O2: (51.610,145.789,56.018)
C6: (54.048,144.340,53.921)
C5: (54.302,143.186,54.543)
O3': (55.388,149.157,53.654)
Image (generated by PyMOL):