Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ0:A101:A100
Extra
PDB:
ATOM 1 O3' G A 100 10.890 35.682 4.984 1.00 38.56 O
ATOM 2 P C A 101 11.329 34.616 6.095 1.00 38.32 P
ATOM 3 OP1 C A 101 12.729 34.254 5.806 1.00 38.49 O
ATOM 4 OP2 C A 101 10.308 33.548 6.166 1.00 39.15 O
ATOM 5 O5' C A 101 11.254 35.418 7.474 1.00 38.01 O
ATOM 6 C5' C A 101 12.057 36.574 7.711 1.00 37.12 C
ATOM 7 C4' C A 101 11.531 37.373 8.895 1.00 35.93 C
ATOM 8 O4' C A 101 10.226 37.957 8.617 1.00 35.98 O
ATOM 9 C3' C A 101 11.293 36.535 10.136 1.00 35.13 C
ATOM 10 O3' C A 101 12.524 36.317 10.774 1.00 33.63 O
ATOM 11 C2' C A 101 10.332 37.434 10.910 1.00 35.61 C
ATOM 12 O2' C A 101 10.949 38.531 11.557 1.00 35.65 O
ATOM 13 C1' C A 101 9.421 37.915 9.782 1.00 35.55 C
ATOM 14 N1 C A 101 8.223 37.014 9.604 1.00 35.85 N
ATOM 15 C2 C A 101 7.109 37.196 10.440 1.00 35.81 C
ATOM 16 O2 C A 101 7.122 38.091 11.288 1.00 36.81 O
ATOM 17 N3 C A 101 6.030 36.387 10.304 1.00 35.70 N
ATOM 18 C4 C A 101 6.029 35.422 9.387 1.00 35.98 C
ATOM 19 N4 C A 101 4.934 34.669 9.303 1.00 35.58 N
ATOM 20 C5 C A 101 7.147 35.200 8.522 1.00 36.14 C
ATOM 21 C6 C A 101 8.209 36.009 8.668 1.00 36.09 C
ATOM 22 P U A 102 12.765 35.071 11.735 1.00 32.11 P
ATOM 23 OP1 U A 102 14.179 35.150 12.162 1.00 32.66 O
ATOM 24 OP2 U A 102 12.273 33.840 11.085 1.00 32.84 O
ATOM 25 O5' U A 102 11.814 35.368 12.988 1.00 32.61 O
TER
ATOM 1 O3' C B 99 6.272 33.718 1.396 1.00 39.13 O
ATOM 2 P G B 100 7.034 33.151 2.693 1.00 39.38 P
ATOM 3 OP1 G B 100 8.078 32.211 2.222 1.00 39.49 O
ATOM 4 OP2 G B 100 6.030 32.701 3.684 1.00 38.94 O
ATOM 5 O5' G B 100 7.757 34.431 3.310 1.00 39.51 O
ATOM 6 C5' G B 100 8.816 35.069 2.632 1.00 39.20 C
ATOM 7 C4' G B 100 9.186 36.317 3.399 1.00 39.04 C
ATOM 8 O4' G B 100 8.052 37.223 3.441 1.00 38.47 O
ATOM 9 C3' G B 100 9.533 36.051 4.858 1.00 38.63 C
ATOM 10 O3' G B 100 10.890 35.682 4.984 1.00 38.56 O
ATOM 11 C2' G B 100 9.239 37.400 5.507 1.00 38.43 C
ATOM 12 O2' G B 100 10.309 38.322 5.405 1.00 37.53 O
ATOM 13 C1' G B 100 8.007 37.851 4.716 1.00 38.41 C
ATOM 14 N9 G B 100 6.764 37.495 5.406 1.00 38.25 N
ATOM 15 C8 G B 100 5.904 36.462 5.114 1.00 38.22 C
ATOM 16 N7 G B 100 4.880 36.387 5.919 1.00 37.94 N
ATOM 17 C5 G B 100 5.070 37.439 6.807 1.00 38.11 C
ATOM 18 C6 G B 100 4.283 37.873 7.908 1.00 38.13 C
ATOM 19 O6 G B 100 3.218 37.401 8.336 1.00 37.98 O
ATOM 20 N1 G B 100 4.844 38.981 8.545 1.00 38.22 N
ATOM 21 C2 G B 100 6.013 39.594 8.163 1.00 38.14 C
ATOM 22 N2 G B 100 6.401 40.650 8.890 1.00 38.34 N
ATOM 23 N3 G B 100 6.751 39.200 7.135 1.00 37.93 N
ATOM 24 C4 G B 100 6.226 38.125 6.504 1.00 37.80 C
ATOM 25 P C B 101 11.329 34.616 6.095 1.00 38.32 P
ATOM 26 OP1 C B 101 12.729 34.254 5.806 1.00 38.49 O
ATOM 27 OP2 C B 101 10.308 33.548 6.166 1.00 39.15 O
ATOM 28 O5' C B 101 11.254 35.418 7.474 1.00 38.01 O
TER
ATOM 2 P C A 101 11.329 34.616 6.095 1.00 38.32 P
ATOM 3 OP1 C A 101 12.729 34.254 5.806 1.00 38.49 O
ATOM 4 OP2 C A 101 10.308 33.548 6.166 1.00 39.15 O
ATOM 5 O5' C A 101 11.254 35.418 7.474 1.00 38.01 O
ATOM 6 C5' C A 101 12.057 36.574 7.711 1.00 37.12 C
ATOM 7 C4' C A 101 11.531 37.373 8.895 1.00 35.93 C
ATOM 8 O4' C A 101 10.226 37.957 8.617 1.00 35.98 O
ATOM 9 C3' C A 101 11.293 36.535 10.136 1.00 35.13 C
ATOM 10 O3' C A 101 12.524 36.317 10.774 1.00 33.63 O
ATOM 11 C2' C A 101 10.332 37.434 10.910 1.00 35.61 C
ATOM 12 O2' C A 101 10.949 38.531 11.557 1.00 35.65 O
ATOM 13 C1' C A 101 9.421 37.915 9.782 1.00 35.55 C
ATOM 14 N1 C A 101 8.223 37.014 9.604 1.00 35.85 N
ATOM 15 C2 C A 101 7.109 37.196 10.440 1.00 35.81 C
ATOM 16 O2 C A 101 7.122 38.091 11.288 1.00 36.81 O
ATOM 17 N3 C A 101 6.030 36.387 10.304 1.00 35.70 N
ATOM 18 C4 C A 101 6.029 35.422 9.387 1.00 35.98 C
ATOM 19 N4 C A 101 4.934 34.669 9.303 1.00 35.58 N
ATOM 20 C5 C A 101 7.147 35.200 8.522 1.00 36.14 C
ATOM 21 C6 C A 101 8.209 36.009 8.668 1.00 36.09 C
ATOM 22 P U A 102 12.765 35.071 11.735 1.00 32.11 P
ATOM 23 OP1 U A 102 14.179 35.150 12.162 1.00 32.66 O
ATOM 24 OP2 U A 102 12.273 33.840 11.085 1.00 32.84 O
ATOM 25 O5' U A 102 11.814 35.368 12.988 1.00 32.61 O
TER
ATOM 1 O3' C B 99 6.272 33.718 1.396 1.00 39.13 O
ATOM 2 P G B 100 7.034 33.151 2.693 1.00 39.38 P
ATOM 3 OP1 G B 100 8.078 32.211 2.222 1.00 39.49 O
ATOM 4 OP2 G B 100 6.030 32.701 3.684 1.00 38.94 O
ATOM 5 O5' G B 100 7.757 34.431 3.310 1.00 39.51 O
ATOM 6 C5' G B 100 8.816 35.069 2.632 1.00 39.20 C
ATOM 7 C4' G B 100 9.186 36.317 3.399 1.00 39.04 C
ATOM 8 O4' G B 100 8.052 37.223 3.441 1.00 38.47 O
ATOM 9 C3' G B 100 9.533 36.051 4.858 1.00 38.63 C
ATOM 10 O3' G B 100 10.890 35.682 4.984 1.00 38.56 O
ATOM 11 C2' G B 100 9.239 37.400 5.507 1.00 38.43 C
ATOM 12 O2' G B 100 10.309 38.322 5.405 1.00 37.53 O
ATOM 13 C1' G B 100 8.007 37.851 4.716 1.00 38.41 C
ATOM 14 N9 G B 100 6.764 37.495 5.406 1.00 38.25 N
ATOM 15 C8 G B 100 5.904 36.462 5.114 1.00 38.22 C
ATOM 16 N7 G B 100 4.880 36.387 5.919 1.00 37.94 N
ATOM 17 C5 G B 100 5.070 37.439 6.807 1.00 38.11 C
ATOM 18 C6 G B 100 4.283 37.873 7.908 1.00 38.13 C
ATOM 19 O6 G B 100 3.218 37.401 8.336 1.00 37.98 O
ATOM 20 N1 G B 100 4.844 38.981 8.545 1.00 38.22 N
ATOM 21 C2 G B 100 6.013 39.594 8.163 1.00 38.14 C
ATOM 22 N2 G B 100 6.401 40.650 8.890 1.00 38.34 N
ATOM 23 N3 G B 100 6.751 39.200 7.135 1.00 37.93 N
ATOM 24 C4 G B 100 6.226 38.125 6.504 1.00 37.80 C
ATOM 25 P C B 101 11.329 34.616 6.095 1.00 38.32 P
ATOM 26 OP1 C B 101 12.729 34.254 5.806 1.00 38.49 O
ATOM 27 OP2 C B 101 10.308 33.548 6.166 1.00 39.15 O
ATOM 28 O5' C B 101 11.254 35.418 7.474 1.00 38.01 O
TER
Atoms:
C2: (7.109,37.196,10.440)
OP1: (12.729,34.254,5.806)
OP2: (10.308,33.548,6.166)
C4: (6.029,35.422,9.387)
O5': (11.254,35.418,7.474)
C3': (11.293,36.535,10.136)
C1': (9.421,37.915,9.782)
O4': (10.226,37.957,8.617)
C5': (12.057,36.574,7.711)
P: (11.329,34.616,6.095)
O2: (7.122,38.091,11.288)
C4': (11.531,37.373,8.895)
C2': (10.332,37.434,10.910)
O2': (10.949,38.531,11.557)
N1: (8.223,37.014,9.604)
N3: (6.030,36.387,10.304)
N4: (4.934,34.669,9.303)
C6: (8.209,36.009,8.668)
C5: (7.147,35.200,8.522)
O3': (12.524,36.317,10.774)
OP1: (12.729,34.254,5.806)
OP2: (10.308,33.548,6.166)
C4: (6.029,35.422,9.387)
O5': (11.254,35.418,7.474)
C3': (11.293,36.535,10.136)
C1': (9.421,37.915,9.782)
O4': (10.226,37.957,8.617)
C5': (12.057,36.574,7.711)
P: (11.329,34.616,6.095)
O2: (7.122,38.091,11.288)
C4': (11.531,37.373,8.895)
C2': (10.332,37.434,10.910)
O2': (10.949,38.531,11.557)
N1: (8.223,37.014,9.604)
N3: (6.030,36.387,10.304)
N4: (4.934,34.669,9.303)
C6: (8.209,36.009,8.668)
C5: (7.147,35.200,8.522)
O3': (12.524,36.317,10.774)
OP1: (8.078,32.211,2.222)
OP2: (6.030,32.701,3.684)
C3': (9.533,36.051,4.858)
C1': (8.007,37.851,4.716)
C5': (8.816,35.069,2.632)
O6: (3.218,37.401,8.336)
O4': (8.052,37.223,3.441)
C8: (5.904,36.462,5.114)
C2: (6.013,39.594,8.163)
C6: (4.283,37.873,7.908)
C5: (5.070,37.439,6.807)
C4: (6.226,38.125,6.504)
P: (7.034,33.151,2.693)
C4': (9.186,36.317,3.399)
C2': (9.239,37.400,5.507)
O2': (10.309,38.322,5.405)
N1: (4.844,38.981,8.545)
N2: (6.401,40.650,8.890)
N3: (6.751,39.200,7.135)
N7: (4.880,36.387,5.919)
N9: (6.764,37.495,5.406)
O5': (7.757,34.431,3.310)
O3': (10.890,35.682,4.984)
OP2: (6.030,32.701,3.684)
C3': (9.533,36.051,4.858)
C1': (8.007,37.851,4.716)
C5': (8.816,35.069,2.632)
O6: (3.218,37.401,8.336)
O4': (8.052,37.223,3.441)
C8: (5.904,36.462,5.114)
C2: (6.013,39.594,8.163)
C6: (4.283,37.873,7.908)
C5: (5.070,37.439,6.807)
C4: (6.226,38.125,6.504)
P: (7.034,33.151,2.693)
C4': (9.186,36.317,3.399)
C2': (9.239,37.400,5.507)
O2': (10.309,38.322,5.405)
N1: (4.844,38.981,8.545)
N2: (6.401,40.650,8.890)
N3: (6.751,39.200,7.135)
N7: (4.880,36.387,5.919)
N9: (6.764,37.495,5.406)
O5': (7.757,34.431,3.310)
O3': (10.890,35.682,4.984)
Image (generated by PyMOL):