ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A429:A473

Extra

PDB:
ATOM 1 O3' G A 428 141.505 89.264 45.946 1.00 77.96 O
ATOM 2 P A A 429 140.348 88.834 44.910 1.00 84.66 P
ATOM 3 OP1 A A 429 139.892 90.067 44.221 1.00 95.36 O
ATOM 4 OP2 A A 429 139.353 87.974 45.595 1.00 95.36 O
ATOM 5 O5' A A 429 141.122 87.943 43.844 1.00 84.66 O
ATOM 6 C5' A A 429 142.549 88.028 43.726 1.00 84.66 C
ATOM 7 C4' A A 429 143.016 87.458 42.408 1.00 84.66 C
ATOM 8 O4' A A 429 144.435 87.734 42.313 1.00 84.66 O
ATOM 9 C3' A A 429 142.889 85.947 42.233 1.00 84.66 C
ATOM 10 O3' A A 429 141.633 85.564 41.657 1.00 84.66 O
ATOM 11 C2' A A 429 144.046 85.624 41.296 1.00 84.66 C
ATOM 12 O2' A A 429 143.722 85.878 39.943 1.00 84.66 O
ATOM 13 C1' A A 429 145.103 86.630 41.745 1.00 84.66 C
ATOM 14 N9 A A 429 146.014 86.109 42.759 1.00 95.36 N
ATOM 15 C8 A A 429 145.922 86.273 44.117 1.00 95.36 C
ATOM 16 N7 A A 429 146.909 85.729 44.782 1.00 95.36 N
ATOM 17 C5 A A 429 147.699 85.157 43.798 1.00 95.36 C
ATOM 18 C6 A A 429 148.901 84.440 43.856 1.00 95.36 C
ATOM 19 N6 A A 429 149.548 84.177 44.990 1.00 95.36 N
ATOM 20 N1 A A 429 149.427 84.002 42.692 1.00 95.36 N
ATOM 21 C2 A A 429 148.782 84.283 41.552 1.00 95.36 C
ATOM 22 N3 A A 429 147.648 84.958 41.369 1.00 95.36 N
ATOM 23 C4 A A 429 147.152 85.373 42.546 1.00 95.36 C
ATOM 24 P A A 430 141.157 84.015 41.706 1.00 71.77 P
ATOM 25 OP1 A A 430 140.124 83.823 40.654 1.00107.16 O
ATOM 26 OP2 A A 430 140.840 83.649 43.110 1.00107.16 O
ATOM 27 O5' A A 430 142.447 83.196 41.256 1.00 71.77 O
TER

ATOM 1 O3' G B 472 144.722 85.924 54.516 1.00 87.37 O
ATOM 2 P U B 473 145.492 87.293 54.149 1.00 91.20 P
ATOM 3 OP1 U B 473 146.063 87.869 55.396 1.00 89.02 O
ATOM 4 OP2 U B 473 144.603 88.134 53.300 1.00 89.02 O
ATOM 5 O5' U B 473 146.710 86.789 53.254 1.00 91.20 O
ATOM 6 C5' U B 473 147.590 85.745 53.724 1.00 91.20 C
ATOM 7 C4' U B 473 148.496 85.275 52.609 1.00 91.20 C
ATOM 8 O4' U B 473 147.722 84.571 51.607 1.00 91.20 O
ATOM 9 C3' U B 473 149.220 86.370 51.846 1.00 91.20 C
ATOM 10 O3' U B 473 150.419 86.746 52.504 1.00 91.20 O
ATOM 11 C2' U B 473 149.492 85.717 50.499 1.00 91.20 C
ATOM 12 O2' U B 473 150.646 84.902 50.520 1.00 91.20 O
ATOM 13 C1' U B 473 148.255 84.836 50.323 1.00 91.20 C
ATOM 14 N1 U B 473 147.211 85.466 49.501 1.00 89.02 N
ATOM 15 C2 U B 473 147.380 85.452 48.133 1.00 89.02 C
ATOM 16 O2 U B 473 148.350 84.953 47.591 1.00 89.02 O
ATOM 17 N3 U B 473 146.370 86.049 47.419 1.00 89.02 N
ATOM 18 C4 U B 473 145.234 86.647 47.920 1.00 89.02 C
ATOM 19 O4 U B 473 144.403 87.116 47.142 1.00 89.02 O
ATOM 20 C5 U B 473 145.132 86.628 49.342 1.00 89.02 C
ATOM 21 C6 U B 473 146.099 86.052 50.067 1.00 89.02 C
ATOM 22 P A B 474 150.881 88.284 52.494 1.00 88.24 P
ATOM 23 OP1 A B 474 151.981 88.408 53.483 1.00 74.75 O
ATOM 24 OP2 A B 474 149.670 89.136 52.634 1.00 74.75 O
ATOM 25 O5' A B 474 151.497 88.496 51.035 1.00 88.24 O
TER

Atoms:
OP1: (139.892,90.067,44.221)
OP2: (139.353,87.974,45.595)
C3': (142.889,85.947,42.233)
C1': (145.103,86.630,41.745)
C5': (142.549,88.028,43.726)
O4': (144.435,87.734,42.313)
C8: (145.922,86.273,44.117)
O2': (143.722,85.878,39.943)
C6: (148.901,84.440,43.856)
C5: (147.699,85.157,43.798)
C4: (147.152,85.373,42.546)
P: (140.348,88.834,44.910)
C4': (143.016,87.458,42.408)
C2': (144.046,85.624,41.296)
C2: (148.782,84.283,41.552)
N1: (149.427,84.002,42.692)
N3: (147.648,84.958,41.369)
N6: (149.548,84.177,44.990)
N7: (146.909,85.729,44.782)
N9: (146.014,86.109,42.759)
O5': (141.122,87.943,43.844)
O3': (141.633,85.564,41.657)
C4: (145.234,86.647,47.920)
N3: (146.370,86.049,47.419)
OP1: (146.063,87.869,55.396)
OP2: (144.603,88.134,53.300)
C2: (147.380,85.452,48.133)
C1': (148.255,84.836,50.323)
C3': (149.220,86.370,51.846)
O5': (146.710,86.789,53.254)
O4': (147.722,84.571,51.607)
C5': (147.590,85.745,53.724)
P: (145.492,87.293,54.149)
C4': (148.496,85.275,52.609)
C2': (149.492,85.717,50.499)
O2': (150.646,84.902,50.520)
N1: (147.211,85.466,49.501)
O4: (144.403,87.116,47.142)
O2: (148.350,84.953,47.591)
C6: (146.099,86.052,50.067)
C5: (145.132,86.628,49.342)
O3': (150.419,86.746,52.504)
Image (generated by PyMOL):
PyMOL image
show in jmol