ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UXC:A140:A159

Extra

PDB:
ATOM 1 O3' C A 139 112.738 29.513 -3.171 1.00 51.25 O
ATOM 2 P A A 140 113.625 28.828 -2.020 1.00 53.03 P
ATOM 3 OP1 A A 140 115.019 28.727 -2.571 1.00 61.08 O
ATOM 4 OP2 A A 140 112.929 27.602 -1.519 1.00 61.08 O
ATOM 5 O5' A A 140 113.612 29.899 -0.841 1.00 53.03 O
ATOM 6 C5' A A 140 114.082 29.568 0.467 1.00 53.03 C
ATOM 7 C4' A A 140 114.169 30.815 1.306 1.00 53.03 C
ATOM 8 O4' A A 140 112.903 31.515 1.273 1.00 53.03 O
ATOM 9 C3' A A 140 114.427 30.566 2.775 1.00 53.03 C
ATOM 10 O3' A A 140 115.810 30.418 3.028 1.00 53.03 O
ATOM 11 C2' A A 140 113.838 31.796 3.455 1.00 53.03 C
ATOM 12 O2' A A 140 114.735 32.880 3.569 1.00 53.03 O
ATOM 13 C1' A A 140 112.693 32.169 2.512 1.00 53.03 C
ATOM 14 N9 A A 140 111.363 31.830 3.017 1.00 61.08 N
ATOM 15 C8 A A 140 110.460 30.930 2.513 1.00 61.08 C
ATOM 16 N7 A A 140 109.338 30.874 3.185 1.00 61.08 N
ATOM 17 C5 A A 140 109.517 31.795 4.205 1.00 61.08 C
ATOM 18 C6 A A 140 108.685 32.212 5.253 1.00 61.08 C
ATOM 19 N6 A A 140 107.460 31.727 5.454 1.00 61.08 N
ATOM 20 N1 A A 140 109.156 33.158 6.096 1.00 61.08 N
ATOM 21 C2 A A 140 110.385 33.644 5.885 1.00 61.08 C
ATOM 22 N3 A A 140 111.262 33.327 4.933 1.00 61.08 N
ATOM 23 C4 A A 140 110.759 32.388 4.116 1.00 61.08 C
ATOM 24 P A A 141 116.297 29.319 4.084 1.00 56.99 P
ATOM 25 OP1 A A 141 117.721 29.563 4.446 1.00 56.49 O
ATOM 26 OP2 A A 141 115.893 27.995 3.567 1.00 56.49 O
ATOM 27 O5' A A 141 115.393 29.630 5.355 1.00 56.99 O
TER

ATOM 1 O3' C B 158 103.201 22.256 1.824 1.00 58.84 O
ATOM 2 P U B 159 102.330 23.479 1.287 1.00 59.46 P
ATOM 3 OP1 U B 159 100.886 23.179 1.466 1.00 66.03 O
ATOM 4 OP2 U B 159 102.856 23.784 -0.063 1.00 66.03 O
ATOM 5 O5' U B 159 102.716 24.683 2.252 1.00 59.46 O
ATOM 6 C5' U B 159 102.092 24.823 3.538 1.00 59.46 C
ATOM 7 C4' U B 159 102.433 26.163 4.149 1.00 59.46 C
ATOM 8 O4' U B 159 103.862 26.253 4.370 1.00 59.46 O
ATOM 9 C3' U B 159 102.103 27.395 3.330 1.00 59.46 C
ATOM 10 O3' U B 159 100.750 27.757 3.526 1.00 59.46 O
ATOM 11 C2' U B 159 103.056 28.438 3.897 1.00 59.46 C
ATOM 12 O2' U B 159 102.585 28.983 5.109 1.00 59.46 O
ATOM 13 C1' U B 159 104.283 27.593 4.221 1.00 59.46 C
ATOM 14 N1 U B 159 105.341 27.643 3.204 1.00 66.03 N
ATOM 15 C2 U B 159 106.357 28.559 3.398 1.00 66.03 C
ATOM 16 O2 U B 159 106.378 29.334 4.349 1.00 66.03 O
ATOM 17 N3 U B 159 107.346 28.543 2.440 1.00 66.03 N
ATOM 18 C4 U B 159 107.417 27.727 1.333 1.00 66.03 C
ATOM 19 O4 U B 159 108.402 27.793 0.598 1.00 66.03 O
ATOM 20 C5 U B 159 106.318 26.821 1.191 1.00 66.03 C
ATOM 21 C6 U B 159 105.340 26.811 2.108 1.00 66.03 C
ATOM 22 P A B 160 100.139 29.002 2.727 1.00 58.25 P
ATOM 23 OP1 A B 160 98.657 28.859 2.713 1.00 70.77 O
ATOM 24 OP2 A B 160 100.881 29.124 1.442 1.00 70.77 O
ATOM 25 O5' A B 160 100.521 30.238 3.659 1.00 58.25 O
TER

Atoms:
OP1: (115.019,28.727,-2.571)
OP2: (112.929,27.602,-1.519)
C3': (114.427,30.566,2.775)
C1': (112.693,32.169,2.512)
C5': (114.082,29.568,0.467)
O4': (112.903,31.515,1.273)
C8: (110.460,30.930,2.513)
O2': (114.735,32.880,3.569)
C6: (108.685,32.212,5.253)
C5: (109.517,31.795,4.205)
C4: (110.759,32.388,4.116)
P: (113.625,28.828,-2.020)
C4': (114.169,30.815,1.306)
C2': (113.838,31.796,3.455)
C2: (110.385,33.644,5.885)
N1: (109.156,33.158,6.096)
N3: (111.262,33.327,4.933)
N6: (107.460,31.727,5.454)
N7: (109.338,30.874,3.185)
N9: (111.363,31.830,3.017)
O5': (113.612,29.899,-0.841)
O3': (115.810,30.418,3.028)
C4: (107.417,27.727,1.333)
N3: (107.346,28.543,2.440)
OP1: (100.886,23.179,1.466)
OP2: (102.856,23.784,-0.063)
C2: (106.357,28.559,3.398)
C1': (104.283,27.593,4.221)
C3': (102.103,27.395,3.330)
O5': (102.716,24.683,2.252)
O4': (103.862,26.253,4.370)
C5': (102.092,24.823,3.538)
P: (102.330,23.479,1.287)
C4': (102.433,26.163,4.149)
C2': (103.056,28.438,3.897)
O2': (102.585,28.983,5.109)
N1: (105.341,27.643,3.204)
O4: (108.402,27.793,0.598)
O2: (106.378,29.334,4.349)
C6: (105.340,26.811,2.108)
C5: (106.318,26.821,1.191)
O3': (100.750,27.757,3.526)
Image (generated by PyMOL):
PyMOL image
show in jmol