ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A2405:A2404

Extra

PDB:
ATOM 1 O3' G A2404 85.551 -62.021 8.185 1.00 34.40 O
ATOM 2 P C A2405 84.496 -61.150 7.377 1.00 33.68 P
ATOM 3 OP1 C A2405 84.496 -61.650 5.985 1.00 29.47 O
ATOM 4 OP2 C A2405 84.844 -59.718 7.614 1.00 35.43 O
ATOM 5 O5' C A2405 83.109 -61.531 8.109 1.00 31.47 O
ATOM 6 C5' C A2405 82.420 -62.742 7.792 1.00 27.29 C
ATOM 7 C4' C A2405 81.245 -62.986 8.701 1.00 27.41 C
ATOM 8 O4' C A2405 81.686 -62.901 10.054 1.00 28.34 O
ATOM 9 C3' C A2405 80.099 -61.990 8.602 1.00 26.47 C
ATOM 10 O3' C A2405 79.176 -62.312 7.570 1.00 25.66 O
ATOM 11 C2' C A2405 79.484 -62.034 9.987 1.00 24.01 C
ATOM 12 O2' C A2405 78.593 -63.126 10.106 1.00 29.22 O
ATOM 13 C1' C A2405 80.696 -62.319 10.853 1.00 29.47 C
ATOM 14 N1 C A2405 81.239 -61.125 11.434 1.00 26.88 N
ATOM 15 C2 C A2405 80.568 -60.583 12.516 1.00 33.57 C
ATOM 16 O2 C A2405 79.522 -61.146 12.918 1.00 35.27 O
ATOM 17 N3 C A2405 81.086 -59.467 13.076 1.00 33.36 N
ATOM 18 C4 C A2405 82.203 -58.948 12.584 1.00 27.85 C
ATOM 19 N4 C A2405 82.683 -57.847 13.161 1.00 27.31 N
ATOM 20 C5 C A2405 82.863 -59.535 11.475 1.00 29.42 C
ATOM 21 C6 C A2405 82.361 -60.626 10.922 1.00 21.95 C
ATOM 22 P G A2406 79.127 -61.429 6.223 1.00 32.68 P
ATOM 23 OP1 G A2406 78.576 -62.304 5.143 1.00 25.56 O
ATOM 24 OP2 G A2406 80.477 -60.842 6.039 1.00 29.00 O
ATOM 25 O5' G A2406 78.080 -60.271 6.595 1.00 27.31 O
TER

ATOM 1 O3' C B2403 89.173 -57.888 10.091 1.00 55.52 O
ATOM 2 P G B2404 87.606 -58.245 10.188 1.00 49.50 P
ATOM 3 OP1 G B2404 87.071 -58.176 8.802 1.00 47.52 O
ATOM 4 OP2 G B2404 87.010 -57.367 11.238 1.00 49.00 O
ATOM 5 O5' G B2404 87.608 -59.750 10.693 1.00 33.70 O
ATOM 6 C5' G B2404 88.025 -60.799 9.831 1.00 36.27 C
ATOM 7 C4' G B2404 87.147 -62.003 9.983 1.00 31.66 C
ATOM 8 O4' G B2404 87.053 -62.336 11.374 1.00 37.21 O
ATOM 9 C3' G B2404 85.717 -61.806 9.553 1.00 28.94 C
ATOM 10 O3' G B2404 85.551 -62.021 8.185 1.00 34.40 O
ATOM 11 C2' G B2404 84.947 -62.789 10.408 1.00 33.14 C
ATOM 12 O2' G B2404 85.002 -64.094 9.849 1.00 30.34 O
ATOM 13 C1' G B2404 85.762 -62.782 11.689 1.00 33.92 C
ATOM 14 N9 G B2404 85.209 -61.883 12.707 1.00 30.01 N
ATOM 15 C8 G B2404 85.749 -60.688 13.114 1.00 27.93 C
ATOM 16 N7 G B2404 85.053 -60.124 14.073 1.00 31.52 N
ATOM 17 C5 G B2404 84.009 -61.000 14.301 1.00 31.28 C
ATOM 18 C6 G B2404 82.934 -60.911 15.212 1.00 33.51 C
ATOM 19 O6 G B2404 82.717 -59.992 15.990 1.00 39.92 O
ATOM 20 N1 G B2404 82.070 -62.005 15.147 1.00 31.04 N
ATOM 21 C2 G B2404 82.249 -63.058 14.274 1.00 32.37 C
ATOM 22 N2 G B2404 81.324 -64.019 14.345 1.00 35.02 N
ATOM 23 N3 G B2404 83.266 -63.177 13.419 1.00 32.74 N
ATOM 24 C4 G B2404 84.098 -62.108 13.481 1.00 33.21 C
ATOM 25 P C B2405 84.496 -61.150 7.377 1.00 33.68 P
ATOM 26 OP1 C B2405 84.496 -61.650 5.985 1.00 29.47 O
ATOM 27 OP2 C B2405 84.844 -59.718 7.614 1.00 35.43 O
ATOM 28 O5' C B2405 83.109 -61.531 8.109 1.00 31.47 O
TER

Atoms:
C2: (80.568,-60.583,12.516)
OP1: (84.496,-61.650,5.985)
OP2: (84.844,-59.718,7.614)
C4: (82.203,-58.948,12.584)
O5': (83.109,-61.531,8.109)
C3': (80.099,-61.990,8.602)
C1': (80.696,-62.319,10.853)
O4': (81.686,-62.901,10.054)
C5': (82.420,-62.742,7.792)
P: (84.496,-61.150,7.377)
O2: (79.522,-61.146,12.918)
C4': (81.245,-62.986,8.701)
C2': (79.484,-62.034,9.987)
O2': (78.593,-63.126,10.106)
N1: (81.239,-61.125,11.434)
N3: (81.086,-59.467,13.076)
N4: (82.683,-57.847,13.161)
C6: (82.361,-60.626,10.922)
C5: (82.863,-59.535,11.475)
O3': (79.176,-62.312,7.570)
OP1: (87.071,-58.176,8.802)
OP2: (87.010,-57.367,11.238)
C3': (85.717,-61.806,9.553)
C1': (85.762,-62.782,11.689)
C5': (88.025,-60.799,9.831)
O6: (82.717,-59.992,15.990)
O4': (87.053,-62.336,11.374)
C8: (85.749,-60.688,13.114)
C2: (82.249,-63.058,14.274)
C6: (82.934,-60.911,15.212)
C5: (84.009,-61.000,14.301)
C4: (84.098,-62.108,13.481)
P: (87.606,-58.245,10.188)
C4': (87.147,-62.003,9.983)
C2': (84.947,-62.789,10.408)
O2': (85.002,-64.094,9.849)
N1: (82.070,-62.005,15.147)
N2: (81.324,-64.019,14.345)
N3: (83.266,-63.177,13.419)
N7: (85.053,-60.124,14.073)
N9: (85.209,-61.883,12.707)
O5': (87.608,-59.750,10.693)
O3': (85.551,-62.021,8.185)
Image (generated by PyMOL):
PyMOL image
show in jmol