ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3EPH:F12:F6

Extra

PDB:
ATOM 1 O3' C A 11 122.436 77.444 41.967 1.00120.96 O
ATOM 2 P A A 12 123.902 77.060 41.419 1.00123.05 P
ATOM 3 OP1 A A 12 124.863 78.034 41.999 1.00123.84 O
ATOM 4 OP2 A A 12 123.834 76.890 39.940 1.00122.27 O
ATOM 5 O5' A A 12 124.183 75.645 42.097 1.00122.93 O
ATOM 6 C5' A A 12 125.503 75.212 42.392 1.00122.42 C
ATOM 7 C4' A A 12 125.496 74.440 43.685 1.00122.38 C
ATOM 8 O4' A A 12 124.348 73.555 43.710 1.00121.61 O
ATOM 9 C3' A A 12 126.681 73.528 43.908 1.00123.67 C
ATOM 10 O3' A A 12 127.785 74.259 44.404 1.00126.99 O
ATOM 11 C2' A A 12 126.122 72.497 44.878 1.00121.94 C
ATOM 12 O2' A A 12 126.063 72.948 46.215 1.00120.69 O
ATOM 13 C1' A A 12 124.700 72.332 44.338 1.00121.21 C
ATOM 14 N9 A A 12 124.597 71.269 43.333 1.00119.73 N
ATOM 15 C8 A A 12 124.222 71.400 42.015 1.00118.39 C
ATOM 16 N7 A A 12 124.239 70.272 41.343 1.00117.37 N
ATOM 17 C5 A A 12 124.650 69.333 42.279 1.00117.20 C
ATOM 18 C6 A A 12 124.870 67.948 42.194 1.00116.12 C
ATOM 19 N6 A A 12 124.704 67.245 41.076 1.00114.99 N
ATOM 20 N1 A A 12 125.270 67.305 43.311 1.00116.22 N
ATOM 21 C2 A A 12 125.434 68.016 44.436 1.00118.01 C
ATOM 22 N3 A A 12 125.261 69.322 44.644 1.00118.69 N
ATOM 23 C4 A A 12 124.866 69.932 43.513 1.00118.55 C
ATOM 24 P G A 13 129.128 74.330 43.529 1.00128.41 P
ATOM 25 OP1 G A 13 130.082 75.162 44.302 1.00129.30 O
ATOM 26 OP2 G A 13 128.746 74.747 42.149 1.00126.48 O
ATOM 27 O5' G A 13 129.642 72.814 43.530 1.00129.83 O
TER

ATOM 1 O3' A B 5 121.429 73.962 32.523 1.00148.44 O
ATOM 2 P U B 6 120.730 72.557 32.204 1.00144.02 P
ATOM 3 OP1 U B 6 120.969 72.247 30.774 1.00144.49 O
ATOM 4 OP2 U B 6 119.340 72.609 32.722 1.00143.88 O
ATOM 5 O5' U B 6 121.550 71.501 33.069 1.00141.18 O
ATOM 6 C5' U B 6 121.933 70.256 32.503 1.00136.36 C
ATOM 7 C4' U B 6 121.993 69.171 33.557 1.00132.64 C
ATOM 8 O4' U B 6 123.142 69.388 34.426 1.00132.35 O
ATOM 9 C3' U B 6 120.822 69.117 34.517 1.00130.30 C
ATOM 10 O3' U B 6 119.684 68.471 33.966 1.00126.06 O
ATOM 11 C2' U B 6 121.421 68.386 35.710 1.00131.04 C
ATOM 12 O2' U B 6 121.507 66.987 35.518 1.00130.99 O
ATOM 13 C1' U B 6 122.830 68.977 35.748 1.00131.27 C
ATOM 14 N1 U B 6 122.887 70.147 36.634 1.00131.12 N
ATOM 15 C2 U B 6 123.320 69.944 37.931 1.00130.98 C
ATOM 16 O2 U B 6 123.679 68.854 38.345 1.00130.55 O
ATOM 17 N3 U B 6 123.317 71.065 38.726 1.00131.17 N
ATOM 18 C4 U B 6 122.935 72.343 38.359 1.00130.94 C
ATOM 19 O4 U B 6 122.985 73.254 39.187 1.00130.92 O
ATOM 20 C5 U B 6 122.511 72.470 36.999 1.00130.71 C
ATOM 21 C6 U B 6 122.505 71.397 36.202 1.00130.73 C
ATOM 22 P G B 7 118.218 68.897 34.467 1.00122.51 P
ATOM 23 OP1 G B 7 117.894 70.229 33.895 1.00121.82 O
ATOM 24 OP2 G B 7 118.138 68.686 35.935 1.00121.69 O
ATOM 25 O5' G B 7 117.261 67.833 33.783 1.00120.59 O
TER

Atoms:
OP1: (124.863,78.034,41.999)
OP2: (123.834,76.890,39.940)
C3': (126.681,73.528,43.908)
C1': (124.700,72.332,44.338)
C5': (125.503,75.212,42.392)
O4': (124.348,73.555,43.710)
C8: (124.222,71.400,42.015)
O2': (126.063,72.948,46.215)
C6: (124.870,67.948,42.194)
C5: (124.650,69.333,42.279)
C4: (124.866,69.932,43.513)
P: (123.902,77.060,41.419)
C4': (125.496,74.440,43.685)
C2': (126.122,72.497,44.878)
C2: (125.434,68.016,44.436)
N1: (125.270,67.305,43.311)
N3: (125.261,69.322,44.644)
N6: (124.704,67.245,41.076)
N7: (124.239,70.272,41.343)
N9: (124.597,71.269,43.333)
O5': (124.183,75.645,42.097)
O3': (127.785,74.259,44.404)
C4: (122.935,72.343,38.359)
N3: (123.317,71.065,38.726)
OP1: (120.969,72.247,30.774)
OP2: (119.340,72.609,32.722)
C2: (123.320,69.944,37.931)
C1': (122.830,68.977,35.748)
C3': (120.822,69.117,34.517)
O5': (121.550,71.501,33.069)
O4': (123.142,69.388,34.426)
C5': (121.933,70.256,32.503)
P: (120.730,72.557,32.204)
C4': (121.993,69.171,33.557)
C2': (121.421,68.386,35.710)
O2': (121.507,66.987,35.518)
N1: (122.887,70.147,36.634)
O4: (122.985,73.254,39.187)
O2: (123.679,68.854,38.345)
C6: (122.505,71.397,36.202)
C5: (122.511,72.470,36.999)
O3': (119.684,68.471,33.966)
Image (generated by PyMOL):
PyMOL image
show in jmol