ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A322:A318

Extra

PDB:
ATOM 1 O3' G A 321 -43.593-116.999 49.678 1.00 82.21 O
ATOM 2 P A A 322 -43.881-118.046 50.855 1.00 59.00 P
ATOM 3 OP1 A A 322 -42.876-117.841 51.917 1.00 48.07 O
ATOM 4 OP2 A A 322 -44.068-119.394 50.285 1.00 47.82 O
ATOM 5 O5' A A 322 -45.282-117.591 51.435 1.00 10.64 O
ATOM 6 C5' A A 322 -45.741-118.177 52.617 1.00 10.64 C
ATOM 7 C4' A A 322 -46.805-117.341 53.227 1.00 10.64 C
ATOM 8 O4' A A 322 -47.955-117.340 52.343 1.00 10.64 O
ATOM 9 C3' A A 322 -47.268-117.906 54.564 1.00 10.64 C
ATOM 10 O3' A A 322 -47.504-116.849 55.488 1.00 10.64 O
ATOM 11 C2' A A 322 -48.540-118.665 54.198 1.00 10.64 C
ATOM 12 O2' A A 322 -49.481-118.760 55.248 1.00 10.64 O
ATOM 13 C1' A A 322 -49.080-117.849 53.026 1.00 10.64 C
ATOM 14 N9 A A 322 -49.827-118.677 52.090 1.00 36.14 N
ATOM 15 C8 A A 322 -49.432-119.862 51.535 1.00 36.24 C
ATOM 16 N7 A A 322 -50.310-120.376 50.716 1.00 36.31 N
ATOM 17 C5 A A 322 -51.354-119.465 50.731 1.00 36.34 C
ATOM 18 C6 A A 322 -52.582-119.428 50.058 1.00 36.27 C
ATOM 19 N6 A A 322 -52.961-120.350 49.173 1.00 36.20 N
ATOM 20 N1 A A 322 -53.409-118.394 50.310 1.00 36.29 N
ATOM 21 C2 A A 322 -53.002-117.454 51.159 1.00 36.38 C
ATOM 22 N3 A A 322 -51.860-117.366 51.840 1.00 36.47 N
ATOM 23 C4 A A 322 -51.073-118.419 51.580 1.00 36.35 C
ATOM 24 P A A 323 -47.614-117.163 57.052 1.00 53.29 P
ATOM 25 OP1 A A 323 -46.957-116.037 57.776 1.00 77.68 O
ATOM 26 OP2 A A 323 -47.156-118.555 57.295 1.00 77.68 O
ATOM 27 O5' A A 323 -49.182-117.079 57.279 1.00 20.93 O
TER

ATOM 1 O3' U B 317 -49.487-130.370 49.468 1.00 49.87 O
ATOM 2 P U B 318 -48.655-129.984 48.147 1.00 54.86 P
ATOM 3 OP1 U B 318 -48.752-131.174 47.273 1.00 41.39 O
ATOM 4 OP2 U B 318 -47.313-129.460 48.529 1.00 41.54 O
ATOM 5 O5' U B 318 -49.500-128.799 47.490 1.00 46.06 O
ATOM 6 C5' U B 318 -50.751-129.065 46.821 1.00 46.06 C
ATOM 7 C4' U B 318 -51.451-127.775 46.442 1.00 46.06 C
ATOM 8 O4' U B 318 -51.888-127.069 47.638 1.00 46.06 O
ATOM 9 C3' U B 318 -50.643-126.737 45.679 1.00 46.06 C
ATOM 10 O3' U B 318 -50.534-126.996 44.293 1.00 46.06 O
ATOM 11 C2' U B 318 -51.424-125.458 45.948 1.00 46.06 C
ATOM 12 O2' U B 318 -52.551-125.320 45.104 1.00 46.06 O
ATOM 13 C1' U B 318 -51.869-125.668 47.396 1.00 46.06 C
ATOM 14 N1 U B 318 -50.904-125.027 48.304 1.00 55.76 N
ATOM 15 C2 U B 318 -51.201-123.761 48.768 1.00 55.71 C
ATOM 16 O2 U B 318 -52.249-123.193 48.524 1.00 55.68 O
ATOM 17 N3 U B 318 -50.223-123.178 49.528 1.00 55.69 N
ATOM 18 C4 U B 318 -49.012-123.718 49.873 1.00 55.72 C
ATOM 19 O4 U B 318 -48.188-123.021 50.463 1.00 55.80 O
ATOM 20 C5 U B 318 -48.797-125.044 49.396 1.00 55.65 C
ATOM 21 C6 U B 318 -49.728-125.640 48.651 1.00 55.69 C
ATOM 22 P G B 319 -49.286-126.394 43.477 1.00 41.83 P
ATOM 23 OP1 G B 319 -49.559-126.602 42.031 1.00 40.44 O
ATOM 24 OP2 G B 319 -48.024-126.911 44.060 1.00 40.53 O
ATOM 25 O5' G B 319 -49.349-124.827 43.791 1.00 50.22 O
TER

Atoms:
OP1: (-42.876,-117.841,51.917)
OP2: (-44.068,-119.394,50.285)
C3': (-47.268,-117.906,54.564)
C1': (-49.080,-117.849,53.026)
C5': (-45.741,-118.177,52.617)
O4': (-47.955,-117.340,52.343)
C8: (-49.432,-119.862,51.535)
O2': (-49.481,-118.760,55.248)
C6: (-52.582,-119.428,50.058)
C5: (-51.354,-119.465,50.731)
C4: (-51.073,-118.419,51.580)
P: (-43.881,-118.046,50.855)
C4': (-46.805,-117.341,53.227)
C2': (-48.540,-118.665,54.198)
C2: (-53.002,-117.454,51.159)
N1: (-53.409,-118.394,50.310)
N3: (-51.860,-117.366,51.840)
N6: (-52.961,-120.350,49.173)
N7: (-50.310,-120.376,50.716)
N9: (-49.827,-118.677,52.090)
O5': (-45.282,-117.591,51.435)
O3': (-47.504,-116.849,55.488)
C4: (-49.012,-123.718,49.873)
N3: (-50.223,-123.178,49.528)
OP1: (-48.752,-131.174,47.273)
OP2: (-47.313,-129.460,48.529)
C2: (-51.201,-123.761,48.768)
C1': (-51.869,-125.668,47.396)
C3': (-50.643,-126.737,45.679)
O5': (-49.500,-128.799,47.490)
O4': (-51.888,-127.069,47.638)
C5': (-50.751,-129.065,46.821)
P: (-48.655,-129.984,48.147)
C4': (-51.451,-127.775,46.442)
C2': (-51.424,-125.458,45.948)
O2': (-52.551,-125.320,45.104)
N1: (-50.904,-125.027,48.304)
O4: (-48.188,-123.021,50.463)
O2: (-52.249,-123.193,48.524)
C6: (-49.728,-125.640,48.651)
C5: (-48.797,-125.044,49.396)
O3': (-50.534,-126.996,44.293)
Image (generated by PyMOL):
PyMOL image
show in jmol