ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTJ:02104:02088

Extra

PDB:
ATOM 1 O3' G A2103 120.988 111.079 40.609 1.00 78.82 O
ATOM 2 P A A2104 121.871 109.755 40.372 1.00 78.33 P
ATOM 3 OP1 A A2104 121.478 108.743 41.393 1.00 78.22 O
ATOM 4 OP2 A A2104 123.295 110.166 40.253 1.00 78.84 O
ATOM 5 O5' A A2104 121.389 109.217 38.953 1.00 77.14 O
ATOM 6 C5' A A2104 120.484 108.105 38.848 1.00 74.92 C
ATOM 7 C4' A A2104 119.056 108.597 38.829 1.00 73.82 C
ATOM 8 O4' A A2104 118.953 109.774 37.980 1.00 72.68 O
ATOM 9 C3' A A2104 118.041 107.597 38.286 1.00 73.41 C
ATOM 10 O3' A A2104 116.774 107.852 38.887 1.00 73.45 O
ATOM 11 C2' A A2104 117.967 108.004 36.821 1.00 73.02 C
ATOM 12 O2' A A2104 116.782 107.595 36.178 1.00 73.40 O
ATOM 13 C1' A A2104 118.022 109.524 36.949 1.00 72.57 C
ATOM 14 N9 A A2104 118.466 110.208 35.739 1.00 72.09 N
ATOM 15 C8 A A2104 119.712 110.699 35.448 1.00 72.15 C
ATOM 16 N7 A A2104 119.799 111.247 34.262 1.00 71.75 N
ATOM 17 C5 A A2104 118.524 111.109 33.739 1.00 71.57 C
ATOM 18 C6 A A2104 117.970 111.476 32.510 1.00 71.52 C
ATOM 19 N6 A A2104 118.662 112.062 31.538 1.00 72.02 N
ATOM 20 N1 A A2104 116.664 111.210 32.304 1.00 72.00 N
ATOM 21 C2 A A2104 115.976 110.597 33.274 1.00 72.02 C
ATOM 22 N3 A A2104 116.392 110.189 34.470 1.00 72.09 N
ATOM 23 C4 A A2104 117.692 110.480 34.641 1.00 71.88 C
ATOM 24 P C A2105 116.043 106.713 39.759 1.00 73.02 P
ATOM 25 OP1 C A2105 116.937 105.522 39.834 1.00 72.20 O
ATOM 26 OP2 C A2105 114.660 106.557 39.223 1.00 73.18 O
ATOM 27 O5' C A2105 115.940 107.392 41.201 1.00 71.23 O
TER

ATOM 1 O3' C B2087 129.606 112.505 32.542 1.00 89.90 O
ATOM 2 P U B2088 128.935 113.973 32.490 1.00 87.95 P
ATOM 3 OP1 U B2088 129.768 114.866 31.647 1.00 87.78 O
ATOM 4 OP2 U B2088 128.607 114.382 33.884 1.00 87.91 O
ATOM 5 O5' U B2088 127.582 113.740 31.692 1.00 86.01 O
ATOM 6 C5' U B2088 127.603 113.244 30.350 1.00 82.87 C
ATOM 7 C4' U B2088 126.215 113.273 29.778 1.00 81.02 C
ATOM 8 O4' U B2088 125.360 112.392 30.562 1.00 80.94 O
ATOM 9 C3' U B2088 125.545 114.641 29.816 1.00 79.57 C
ATOM 10 O3' U B2088 124.635 114.689 28.728 1.00 77.40 O
ATOM 11 C2' U B2088 124.789 114.590 31.139 1.00 79.90 C
ATOM 12 O2' U B2088 123.700 115.483 31.221 1.00 79.71 O
ATOM 13 C1' U B2088 124.303 113.144 31.128 1.00 80.83 C
ATOM 14 N1 U B2088 123.977 112.592 32.451 1.00 81.19 N
ATOM 15 C2 U B2088 122.651 112.288 32.705 1.00 81.25 C
ATOM 16 O2 U B2088 121.764 112.447 31.882 1.00 81.21 O
ATOM 17 N3 U B2088 122.403 111.785 33.955 1.00 81.39 N
ATOM 18 C4 U B2088 123.321 111.558 34.955 1.00 81.85 C
ATOM 19 O4 U B2088 122.935 111.121 36.040 1.00 81.82 O
ATOM 20 C5 U B2088 124.673 111.891 34.614 1.00 81.73 C
ATOM 21 C6 U B2088 124.946 112.386 33.405 1.00 81.24 C
ATOM 22 P C B2089 124.157 116.100 28.134 1.00 75.74 P
ATOM 23 OP1 C B2089 125.065 116.437 27.016 1.00 76.64 O
ATOM 24 OP2 C B2089 123.996 117.053 29.261 1.00 75.41 O
ATOM 25 O5' C B2089 122.728 115.736 27.528 1.00 74.99 O
TER

Atoms:
OP1: (121.478,108.743,41.393)
OP2: (123.295,110.166,40.253)
C3': (118.041,107.597,38.286)
C1': (118.022,109.524,36.949)
C5': (120.484,108.105,38.848)
O4': (118.953,109.774,37.980)
C8: (119.712,110.699,35.448)
O2': (116.782,107.595,36.178)
C6: (117.970,111.476,32.510)
C5: (118.524,111.109,33.739)
C4: (117.692,110.480,34.641)
P: (121.871,109.755,40.372)
C4': (119.056,108.597,38.829)
C2': (117.967,108.004,36.821)
C2: (115.976,110.597,33.274)
N1: (116.664,111.210,32.304)
N3: (116.392,110.189,34.470)
N6: (118.662,112.062,31.538)
N7: (119.799,111.247,34.262)
N9: (118.466,110.208,35.739)
O5': (121.389,109.217,38.953)
O3': (116.774,107.852,38.887)
C4: (123.321,111.558,34.955)
N3: (122.403,111.785,33.955)
OP1: (129.768,114.866,31.647)
OP2: (128.607,114.382,33.884)
C2: (122.651,112.288,32.705)
C1': (124.303,113.144,31.128)
C3': (125.545,114.641,29.816)
O5': (127.582,113.740,31.692)
O4': (125.360,112.392,30.562)
C5': (127.603,113.244,30.350)
P: (128.935,113.973,32.490)
C4': (126.215,113.273,29.778)
C2': (124.789,114.590,31.139)
O2': (123.700,115.483,31.221)
N1: (123.977,112.592,32.451)
O4: (122.935,111.121,36.040)
O2: (121.764,112.447,31.882)
C6: (124.946,112.386,33.405)
C5: (124.673,111.891,34.614)
O3': (124.635,114.689,28.728)
Image (generated by PyMOL):
PyMOL image
show in jmol