Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KFU:M12:M13
Extra
PDB:
ATOM 1 O3' U A 11 -18.198 -18.282 105.572 1.00 43.69 O
ATOM 2 P C A 12 -16.778 -18.944 105.917 1.00 93.50 P
ATOM 3 OP1 C A 12 -16.479 -18.626 107.335 1.00107.12 O
ATOM 4 OP2 C A 12 -15.821 -18.501 104.871 1.00 38.50 O
ATOM 5 O5' C A 12 -17.084 -20.499 105.759 1.00 75.67 O
ATOM 6 C5' C A 12 -16.085 -21.405 105.310 1.00 57.05 C
ATOM 7 C4' C A 12 -16.584 -22.828 105.318 1.00 98.69 C
ATOM 8 O4' C A 12 -17.586 -22.992 104.274 1.00 63.33 O
ATOM 9 C3' C A 12 -15.517 -23.883 105.053 1.00 99.60 C
ATOM 10 O3' C A 12 -15.826 -25.067 105.780 1.00 64.02 O
ATOM 11 C2' C A 12 -15.673 -24.147 103.563 1.00141.95 C
ATOM 12 O2' C A 12 -15.199 -25.404 103.134 1.00162.01 O
ATOM 13 C1' C A 12 -17.183 -24.017 103.386 1.00 76.41 C
ATOM 14 N1 C A 12 -17.582 -23.633 102.019 1.00 79.77 N
ATOM 15 C2 C A 12 -18.564 -24.363 101.353 1.00 68.08 C
ATOM 16 O2 C A 12 -19.112 -25.308 101.937 1.00 87.65 O
ATOM 17 N3 C A 12 -18.894 -24.006 100.091 1.00 83.66 N
ATOM 18 C4 C A 12 -18.280 -22.980 99.499 1.00 78.92 C
ATOM 19 N4 C A 12 -18.636 -22.660 98.254 1.00 89.98 N
ATOM 20 C5 C A 12 -17.268 -22.229 100.154 1.00110.36 C
ATOM 21 C6 C A 12 -16.950 -22.594 101.399 1.00126.73 C
ATOM 22 P A A 13 -14.663 -26.108 106.140 1.00119.94 P
ATOM 23 OP1 A A 13 -14.505 -26.094 107.615 1.00144.66 O
ATOM 24 OP2 A A 13 -13.495 -25.760 105.294 1.00 67.69 O
ATOM 25 O5' A A 13 -15.279 -27.500 105.671 1.00128.38 O
TER
ATOM 1 O3' C B 12 -15.826 -25.067 105.780 1.00 64.02 O
ATOM 2 P A B 13 -14.663 -26.108 106.140 1.00119.94 P
ATOM 3 OP1 A B 13 -14.505 -26.094 107.615 1.00144.66 O
ATOM 4 OP2 A B 13 -13.495 -25.760 105.294 1.00 67.69 O
ATOM 5 O5' A B 13 -15.279 -27.500 105.671 1.00128.38 O
ATOM 6 C5' A B 13 -16.126 -27.568 104.537 1.00 69.06 C
ATOM 7 C4' A B 13 -16.779 -28.919 104.402 1.00 76.41 C
ATOM 8 O4' A B 13 -17.865 -28.832 103.441 1.00103.09 O
ATOM 9 C3' A B 13 -15.891 -30.040 103.873 1.00 99.99 C
ATOM 10 O3' A B 13 -15.121 -30.661 104.888 1.00 94.60 O
ATOM 11 C2' A B 13 -16.893 -30.977 103.213 1.00111.77 C
ATOM 12 O2' A B 13 -17.561 -31.761 104.190 1.00 58.39 O
ATOM 13 C1' A B 13 -17.892 -29.983 102.630 1.00112.08 C
ATOM 14 N9 A B 13 -17.537 -29.586 101.255 1.00 79.28 N
ATOM 15 C8 A B 13 -16.851 -28.460 100.875 1.00 64.98 C
ATOM 16 N7 A B 13 -16.681 -28.357 99.581 1.00102.33 N
ATOM 17 C5 A B 13 -17.299 -29.490 99.074 1.00107.51 C
ATOM 18 C6 A B 13 -17.464 -29.966 97.763 1.00106.76 C
ATOM 19 N6 A B 13 -17.003 -29.334 96.683 1.00135.93 N
ATOM 20 N1 A B 13 -18.128 -31.128 97.599 1.00 92.51 N
ATOM 21 C2 A B 13 -18.590 -31.760 98.684 1.00107.14 C
ATOM 22 N3 A B 13 -18.499 -31.415 99.966 1.00120.42 N
ATOM 23 C4 A B 13 -17.835 -30.255 100.094 1.00109.09 C
ATOM 24 P G B 14 -13.739 -31.403 104.528 1.00105.57 P
ATOM 25 OP1 G B 14 -13.366 -32.225 105.705 1.00132.16 O
ATOM 26 OP2 G B 14 -12.793 -30.361 104.061 1.00 86.98 O
ATOM 27 O5' G B 14 -14.144 -32.352 103.313 1.00127.83 O
TER
ATOM 2 P C A 12 -16.778 -18.944 105.917 1.00 93.50 P
ATOM 3 OP1 C A 12 -16.479 -18.626 107.335 1.00107.12 O
ATOM 4 OP2 C A 12 -15.821 -18.501 104.871 1.00 38.50 O
ATOM 5 O5' C A 12 -17.084 -20.499 105.759 1.00 75.67 O
ATOM 6 C5' C A 12 -16.085 -21.405 105.310 1.00 57.05 C
ATOM 7 C4' C A 12 -16.584 -22.828 105.318 1.00 98.69 C
ATOM 8 O4' C A 12 -17.586 -22.992 104.274 1.00 63.33 O
ATOM 9 C3' C A 12 -15.517 -23.883 105.053 1.00 99.60 C
ATOM 10 O3' C A 12 -15.826 -25.067 105.780 1.00 64.02 O
ATOM 11 C2' C A 12 -15.673 -24.147 103.563 1.00141.95 C
ATOM 12 O2' C A 12 -15.199 -25.404 103.134 1.00162.01 O
ATOM 13 C1' C A 12 -17.183 -24.017 103.386 1.00 76.41 C
ATOM 14 N1 C A 12 -17.582 -23.633 102.019 1.00 79.77 N
ATOM 15 C2 C A 12 -18.564 -24.363 101.353 1.00 68.08 C
ATOM 16 O2 C A 12 -19.112 -25.308 101.937 1.00 87.65 O
ATOM 17 N3 C A 12 -18.894 -24.006 100.091 1.00 83.66 N
ATOM 18 C4 C A 12 -18.280 -22.980 99.499 1.00 78.92 C
ATOM 19 N4 C A 12 -18.636 -22.660 98.254 1.00 89.98 N
ATOM 20 C5 C A 12 -17.268 -22.229 100.154 1.00110.36 C
ATOM 21 C6 C A 12 -16.950 -22.594 101.399 1.00126.73 C
ATOM 22 P A A 13 -14.663 -26.108 106.140 1.00119.94 P
ATOM 23 OP1 A A 13 -14.505 -26.094 107.615 1.00144.66 O
ATOM 24 OP2 A A 13 -13.495 -25.760 105.294 1.00 67.69 O
ATOM 25 O5' A A 13 -15.279 -27.500 105.671 1.00128.38 O
TER
ATOM 1 O3' C B 12 -15.826 -25.067 105.780 1.00 64.02 O
ATOM 2 P A B 13 -14.663 -26.108 106.140 1.00119.94 P
ATOM 3 OP1 A B 13 -14.505 -26.094 107.615 1.00144.66 O
ATOM 4 OP2 A B 13 -13.495 -25.760 105.294 1.00 67.69 O
ATOM 5 O5' A B 13 -15.279 -27.500 105.671 1.00128.38 O
ATOM 6 C5' A B 13 -16.126 -27.568 104.537 1.00 69.06 C
ATOM 7 C4' A B 13 -16.779 -28.919 104.402 1.00 76.41 C
ATOM 8 O4' A B 13 -17.865 -28.832 103.441 1.00103.09 O
ATOM 9 C3' A B 13 -15.891 -30.040 103.873 1.00 99.99 C
ATOM 10 O3' A B 13 -15.121 -30.661 104.888 1.00 94.60 O
ATOM 11 C2' A B 13 -16.893 -30.977 103.213 1.00111.77 C
ATOM 12 O2' A B 13 -17.561 -31.761 104.190 1.00 58.39 O
ATOM 13 C1' A B 13 -17.892 -29.983 102.630 1.00112.08 C
ATOM 14 N9 A B 13 -17.537 -29.586 101.255 1.00 79.28 N
ATOM 15 C8 A B 13 -16.851 -28.460 100.875 1.00 64.98 C
ATOM 16 N7 A B 13 -16.681 -28.357 99.581 1.00102.33 N
ATOM 17 C5 A B 13 -17.299 -29.490 99.074 1.00107.51 C
ATOM 18 C6 A B 13 -17.464 -29.966 97.763 1.00106.76 C
ATOM 19 N6 A B 13 -17.003 -29.334 96.683 1.00135.93 N
ATOM 20 N1 A B 13 -18.128 -31.128 97.599 1.00 92.51 N
ATOM 21 C2 A B 13 -18.590 -31.760 98.684 1.00107.14 C
ATOM 22 N3 A B 13 -18.499 -31.415 99.966 1.00120.42 N
ATOM 23 C4 A B 13 -17.835 -30.255 100.094 1.00109.09 C
ATOM 24 P G B 14 -13.739 -31.403 104.528 1.00105.57 P
ATOM 25 OP1 G B 14 -13.366 -32.225 105.705 1.00132.16 O
ATOM 26 OP2 G B 14 -12.793 -30.361 104.061 1.00 86.98 O
ATOM 27 O5' G B 14 -14.144 -32.352 103.313 1.00127.83 O
TER
Atoms:
C2: (-18.564,-24.363,101.353)
OP1: (-16.479,-18.626,107.335)
OP2: (-15.821,-18.501,104.871)
C4: (-18.280,-22.980,99.499)
O5': (-17.084,-20.499,105.759)
C3': (-15.517,-23.883,105.053)
C1': (-17.183,-24.017,103.386)
O4': (-17.586,-22.992,104.274)
C5': (-16.085,-21.405,105.310)
P: (-16.778,-18.944,105.917)
O2: (-19.112,-25.308,101.937)
C4': (-16.584,-22.828,105.318)
C2': (-15.673,-24.147,103.563)
O2': (-15.199,-25.404,103.134)
N1: (-17.582,-23.633,102.019)
N3: (-18.894,-24.006,100.091)
N4: (-18.636,-22.660,98.254)
C6: (-16.950,-22.594,101.399)
C5: (-17.268,-22.229,100.154)
O3': (-15.826,-25.067,105.780)
OP1: (-16.479,-18.626,107.335)
OP2: (-15.821,-18.501,104.871)
C4: (-18.280,-22.980,99.499)
O5': (-17.084,-20.499,105.759)
C3': (-15.517,-23.883,105.053)
C1': (-17.183,-24.017,103.386)
O4': (-17.586,-22.992,104.274)
C5': (-16.085,-21.405,105.310)
P: (-16.778,-18.944,105.917)
O2: (-19.112,-25.308,101.937)
C4': (-16.584,-22.828,105.318)
C2': (-15.673,-24.147,103.563)
O2': (-15.199,-25.404,103.134)
N1: (-17.582,-23.633,102.019)
N3: (-18.894,-24.006,100.091)
N4: (-18.636,-22.660,98.254)
C6: (-16.950,-22.594,101.399)
C5: (-17.268,-22.229,100.154)
O3': (-15.826,-25.067,105.780)
OP1: (-14.505,-26.094,107.615)
OP2: (-13.495,-25.760,105.294)
C3': (-15.891,-30.040,103.873)
C1': (-17.892,-29.983,102.630)
C5': (-16.126,-27.568,104.537)
O4': (-17.865,-28.832,103.441)
C8: (-16.851,-28.460,100.875)
O2': (-17.561,-31.761,104.190)
C6: (-17.464,-29.966,97.763)
C5: (-17.299,-29.490,99.074)
C4: (-17.835,-30.255,100.094)
P: (-14.663,-26.108,106.140)
C4': (-16.779,-28.919,104.402)
C2': (-16.893,-30.977,103.213)
C2: (-18.590,-31.760,98.684)
N1: (-18.128,-31.128,97.599)
N3: (-18.499,-31.415,99.966)
N6: (-17.003,-29.334,96.683)
N7: (-16.681,-28.357,99.581)
N9: (-17.537,-29.586,101.255)
O5': (-15.279,-27.500,105.671)
O3': (-15.121,-30.661,104.888)
OP2: (-13.495,-25.760,105.294)
C3': (-15.891,-30.040,103.873)
C1': (-17.892,-29.983,102.630)
C5': (-16.126,-27.568,104.537)
O4': (-17.865,-28.832,103.441)
C8: (-16.851,-28.460,100.875)
O2': (-17.561,-31.761,104.190)
C6: (-17.464,-29.966,97.763)
C5: (-17.299,-29.490,99.074)
C4: (-17.835,-30.255,100.094)
P: (-14.663,-26.108,106.140)
C4': (-16.779,-28.919,104.402)
C2': (-16.893,-30.977,103.213)
C2: (-18.590,-31.760,98.684)
N1: (-18.128,-31.128,97.599)
N3: (-18.499,-31.415,99.966)
N6: (-17.003,-29.334,96.683)
N7: (-16.681,-28.357,99.581)
N9: (-17.537,-29.586,101.255)
O5': (-15.279,-27.500,105.671)
O3': (-15.121,-30.661,104.888)
Image (generated by PyMOL):