Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XLK:D12:D13
Extra
PDB:
ATOM 1 O3' G A 11 10.723 6.835 -6.242 1.00 31.42 O
ATOM 2 P C A 12 10.244 6.271 -4.831 1.00 37.41 P
ATOM 3 OP1 C A 12 9.731 7.440 -4.068 1.00 33.24 O
ATOM 4 OP2 C A 12 11.330 5.444 -4.253 1.00 41.94 O
ATOM 5 O5' C A 12 9.037 5.318 -5.213 1.00 33.42 O
ATOM 6 C5' C A 12 8.017 5.786 -6.073 1.00 32.77 C
ATOM 7 C4' C A 12 7.174 4.642 -6.568 1.00 31.54 C
ATOM 8 O4' C A 12 7.993 3.708 -7.316 1.00 27.34 O
ATOM 9 C3' C A 12 6.512 3.772 -5.513 1.00 28.84 C
ATOM 10 O3' C A 12 5.360 4.382 -4.969 1.00 27.62 O
ATOM 11 C2' C A 12 6.206 2.516 -6.317 1.00 24.68 C
ATOM 12 O2' C A 12 5.134 2.767 -7.214 1.00 24.76 O
ATOM 13 C1' C A 12 7.464 2.407 -7.171 1.00 25.21 C
ATOM 14 N1 C A 12 8.486 1.470 -6.648 1.00 23.24 N
ATOM 15 C2 C A 12 8.185 0.104 -6.701 1.00 25.11 C
ATOM 16 O2 C A 12 7.074 -0.239 -7.144 1.00 24.12 O
ATOM 17 N3 C A 12 9.091 -0.799 -6.251 1.00 22.18 N
ATOM 18 C4 C A 12 10.270 -0.395 -5.785 1.00 22.93 C
ATOM 19 N4 C A 12 11.126 -1.335 -5.362 1.00 20.32 N
ATOM 20 C5 C A 12 10.610 0.997 -5.732 1.00 21.90 C
ATOM 21 C6 C A 12 9.699 1.887 -6.175 1.00 19.41 C
ATOM 22 P A A 13 4.725 3.933 -3.570 1.00 26.90 P
ATOM 23 OP1 A A 13 3.675 4.954 -3.333 1.00 33.84 O
ATOM 24 OP2 A A 13 5.790 3.752 -2.542 1.00 21.22 O
ATOM 25 O5' A A 13 4.098 2.525 -3.936 1.00 24.62 O
TER
ATOM 1 O3' C B 12 5.360 4.382 -4.969 1.00 27.62 O
ATOM 2 P A B 13 4.725 3.933 -3.570 1.00 26.90 P
ATOM 3 OP1 A B 13 3.675 4.954 -3.333 1.00 33.84 O
ATOM 4 OP2 A B 13 5.790 3.752 -2.542 1.00 21.22 O
ATOM 5 O5' A B 13 4.098 2.525 -3.936 1.00 24.62 O
ATOM 6 C5' A B 13 2.998 2.395 -4.822 1.00 27.91 C
ATOM 7 C4' A B 13 2.507 0.971 -4.821 1.00 28.59 C
ATOM 8 O4' A B 13 3.496 0.109 -5.443 1.00 29.49 O
ATOM 9 C3' A B 13 2.312 0.356 -3.445 1.00 28.15 C
ATOM 10 O3' A B 13 1.091 0.729 -2.843 1.00 31.04 O
ATOM 11 C2' A B 13 2.412 -1.133 -3.731 1.00 29.73 C
ATOM 12 O2' A B 13 1.248 -1.586 -4.402 1.00 31.69 O
ATOM 13 C1' A B 13 3.515 -1.137 -4.771 1.00 26.04 C
ATOM 14 N9 A B 13 4.861 -1.343 -4.218 1.00 23.94 N
ATOM 15 C8 A B 13 5.815 -0.401 -3.925 1.00 21.87 C
ATOM 16 N7 A B 13 6.947 -0.922 -3.505 1.00 20.90 N
ATOM 17 C5 A B 13 6.721 -2.294 -3.552 1.00 19.66 C
ATOM 18 C6 A B 13 7.520 -3.405 -3.248 1.00 16.08 C
ATOM 19 N6 A B 13 8.782 -3.306 -2.831 1.00 18.60 N
ATOM 20 N1 A B 13 6.975 -4.640 -3.424 1.00 18.60 N
ATOM 21 C2 A B 13 5.717 -4.743 -3.854 1.00 21.57 C
ATOM 22 N3 A B 13 4.873 -3.768 -4.176 1.00 24.77 N
ATOM 23 C4 A B 13 5.443 -2.565 -4.007 1.00 22.06 C
ATOM 24 P g B 14 0.937 0.799 -1.249 1.00 33.09 P
ATOM 25 OP1 g B 14 2.133 1.427 -0.647 1.00 35.87 O
ATOM 26 OP2 g B 14 -0.402 1.344 -0.961 1.00 38.50 O
ATOM 27 O5' g B 14 0.904 -0.738 -0.857 1.00 30.71 O
TER
ATOM 2 P C A 12 10.244 6.271 -4.831 1.00 37.41 P
ATOM 3 OP1 C A 12 9.731 7.440 -4.068 1.00 33.24 O
ATOM 4 OP2 C A 12 11.330 5.444 -4.253 1.00 41.94 O
ATOM 5 O5' C A 12 9.037 5.318 -5.213 1.00 33.42 O
ATOM 6 C5' C A 12 8.017 5.786 -6.073 1.00 32.77 C
ATOM 7 C4' C A 12 7.174 4.642 -6.568 1.00 31.54 C
ATOM 8 O4' C A 12 7.993 3.708 -7.316 1.00 27.34 O
ATOM 9 C3' C A 12 6.512 3.772 -5.513 1.00 28.84 C
ATOM 10 O3' C A 12 5.360 4.382 -4.969 1.00 27.62 O
ATOM 11 C2' C A 12 6.206 2.516 -6.317 1.00 24.68 C
ATOM 12 O2' C A 12 5.134 2.767 -7.214 1.00 24.76 O
ATOM 13 C1' C A 12 7.464 2.407 -7.171 1.00 25.21 C
ATOM 14 N1 C A 12 8.486 1.470 -6.648 1.00 23.24 N
ATOM 15 C2 C A 12 8.185 0.104 -6.701 1.00 25.11 C
ATOM 16 O2 C A 12 7.074 -0.239 -7.144 1.00 24.12 O
ATOM 17 N3 C A 12 9.091 -0.799 -6.251 1.00 22.18 N
ATOM 18 C4 C A 12 10.270 -0.395 -5.785 1.00 22.93 C
ATOM 19 N4 C A 12 11.126 -1.335 -5.362 1.00 20.32 N
ATOM 20 C5 C A 12 10.610 0.997 -5.732 1.00 21.90 C
ATOM 21 C6 C A 12 9.699 1.887 -6.175 1.00 19.41 C
ATOM 22 P A A 13 4.725 3.933 -3.570 1.00 26.90 P
ATOM 23 OP1 A A 13 3.675 4.954 -3.333 1.00 33.84 O
ATOM 24 OP2 A A 13 5.790 3.752 -2.542 1.00 21.22 O
ATOM 25 O5' A A 13 4.098 2.525 -3.936 1.00 24.62 O
TER
ATOM 1 O3' C B 12 5.360 4.382 -4.969 1.00 27.62 O
ATOM 2 P A B 13 4.725 3.933 -3.570 1.00 26.90 P
ATOM 3 OP1 A B 13 3.675 4.954 -3.333 1.00 33.84 O
ATOM 4 OP2 A B 13 5.790 3.752 -2.542 1.00 21.22 O
ATOM 5 O5' A B 13 4.098 2.525 -3.936 1.00 24.62 O
ATOM 6 C5' A B 13 2.998 2.395 -4.822 1.00 27.91 C
ATOM 7 C4' A B 13 2.507 0.971 -4.821 1.00 28.59 C
ATOM 8 O4' A B 13 3.496 0.109 -5.443 1.00 29.49 O
ATOM 9 C3' A B 13 2.312 0.356 -3.445 1.00 28.15 C
ATOM 10 O3' A B 13 1.091 0.729 -2.843 1.00 31.04 O
ATOM 11 C2' A B 13 2.412 -1.133 -3.731 1.00 29.73 C
ATOM 12 O2' A B 13 1.248 -1.586 -4.402 1.00 31.69 O
ATOM 13 C1' A B 13 3.515 -1.137 -4.771 1.00 26.04 C
ATOM 14 N9 A B 13 4.861 -1.343 -4.218 1.00 23.94 N
ATOM 15 C8 A B 13 5.815 -0.401 -3.925 1.00 21.87 C
ATOM 16 N7 A B 13 6.947 -0.922 -3.505 1.00 20.90 N
ATOM 17 C5 A B 13 6.721 -2.294 -3.552 1.00 19.66 C
ATOM 18 C6 A B 13 7.520 -3.405 -3.248 1.00 16.08 C
ATOM 19 N6 A B 13 8.782 -3.306 -2.831 1.00 18.60 N
ATOM 20 N1 A B 13 6.975 -4.640 -3.424 1.00 18.60 N
ATOM 21 C2 A B 13 5.717 -4.743 -3.854 1.00 21.57 C
ATOM 22 N3 A B 13 4.873 -3.768 -4.176 1.00 24.77 N
ATOM 23 C4 A B 13 5.443 -2.565 -4.007 1.00 22.06 C
ATOM 24 P g B 14 0.937 0.799 -1.249 1.00 33.09 P
ATOM 25 OP1 g B 14 2.133 1.427 -0.647 1.00 35.87 O
ATOM 26 OP2 g B 14 -0.402 1.344 -0.961 1.00 38.50 O
ATOM 27 O5' g B 14 0.904 -0.738 -0.857 1.00 30.71 O
TER
Atoms:
C2: (8.185,0.104,-6.701)
OP1: (9.731,7.440,-4.068)
OP2: (11.330,5.444,-4.253)
C4: (10.270,-0.395,-5.785)
O5': (9.037,5.318,-5.213)
C3': (6.512,3.772,-5.513)
C1': (7.464,2.407,-7.171)
O4': (7.993,3.708,-7.316)
C5': (8.017,5.786,-6.073)
P: (10.244,6.271,-4.831)
O2: (7.074,-0.239,-7.144)
C4': (7.174,4.642,-6.568)
C2': (6.206,2.516,-6.317)
O2': (5.134,2.767,-7.214)
N1: (8.486,1.470,-6.648)
N3: (9.091,-0.799,-6.251)
N4: (11.126,-1.335,-5.362)
C6: (9.699,1.887,-6.175)
C5: (10.610,0.997,-5.732)
O3': (5.360,4.382,-4.969)
OP1: (9.731,7.440,-4.068)
OP2: (11.330,5.444,-4.253)
C4: (10.270,-0.395,-5.785)
O5': (9.037,5.318,-5.213)
C3': (6.512,3.772,-5.513)
C1': (7.464,2.407,-7.171)
O4': (7.993,3.708,-7.316)
C5': (8.017,5.786,-6.073)
P: (10.244,6.271,-4.831)
O2: (7.074,-0.239,-7.144)
C4': (7.174,4.642,-6.568)
C2': (6.206,2.516,-6.317)
O2': (5.134,2.767,-7.214)
N1: (8.486,1.470,-6.648)
N3: (9.091,-0.799,-6.251)
N4: (11.126,-1.335,-5.362)
C6: (9.699,1.887,-6.175)
C5: (10.610,0.997,-5.732)
O3': (5.360,4.382,-4.969)
OP1: (3.675,4.954,-3.333)
OP2: (5.790,3.752,-2.542)
C3': (2.312,0.356,-3.445)
C1': (3.515,-1.137,-4.771)
C5': (2.998,2.395,-4.822)
O4': (3.496,0.109,-5.443)
C8: (5.815,-0.401,-3.925)
O2': (1.248,-1.586,-4.402)
C6: (7.520,-3.405,-3.248)
C5: (6.721,-2.294,-3.552)
C4: (5.443,-2.565,-4.007)
P: (4.725,3.933,-3.570)
C4': (2.507,0.971,-4.821)
C2': (2.412,-1.133,-3.731)
C2: (5.717,-4.743,-3.854)
N1: (6.975,-4.640,-3.424)
N3: (4.873,-3.768,-4.176)
N6: (8.782,-3.306,-2.831)
N7: (6.947,-0.922,-3.505)
N9: (4.861,-1.343,-4.218)
O5': (4.098,2.525,-3.936)
O3': (1.091,0.729,-2.843)
OP2: (5.790,3.752,-2.542)
C3': (2.312,0.356,-3.445)
C1': (3.515,-1.137,-4.771)
C5': (2.998,2.395,-4.822)
O4': (3.496,0.109,-5.443)
C8: (5.815,-0.401,-3.925)
O2': (1.248,-1.586,-4.402)
C6: (7.520,-3.405,-3.248)
C5: (6.721,-2.294,-3.552)
C4: (5.443,-2.565,-4.007)
P: (4.725,3.933,-3.570)
C4': (2.507,0.971,-4.821)
C2': (2.412,-1.133,-3.731)
C2: (5.717,-4.743,-3.854)
N1: (6.975,-4.640,-3.424)
N3: (4.873,-3.768,-4.176)
N6: (8.782,-3.306,-2.831)
N7: (6.947,-0.922,-3.505)
N9: (4.861,-1.343,-4.218)
O5': (4.098,2.525,-3.936)
O3': (1.091,0.729,-2.843)
Image (generated by PyMOL):