ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02442:02438

Extra

PDB:
ATOM 1 O3' A A2441 74.493 126.608 139.102 1.00 37.25 O
ATOM 2 P A A2442 76.097 126.697 139.060 1.00 38.73 P
ATOM 3 OP1 A A2442 76.613 125.398 138.564 1.00 38.27 O
ATOM 4 OP2 A A2442 76.555 127.214 140.367 1.00 41.92 O
ATOM 5 O5' A A2442 76.424 127.830 137.991 1.00 37.93 O
ATOM 6 C5' A A2442 76.330 127.580 136.581 1.00 37.48 C
ATOM 7 C4' A A2442 74.927 127.870 136.097 1.00 40.02 C
ATOM 8 O4' A A2442 74.453 129.129 136.646 1.00 39.64 O
ATOM 9 C3' A A2442 74.764 127.983 134.590 1.00 39.93 C
ATOM 10 O3' A A2442 73.469 127.539 134.216 1.00 42.05 O
ATOM 11 C2' A A2442 74.924 129.479 134.358 1.00 40.08 C
ATOM 12 O2' A A2442 74.297 129.935 133.182 1.00 40.65 O
ATOM 13 C1' A A2442 74.261 130.068 135.604 1.00 39.52 C
ATOM 14 N9 A A2442 74.901 131.319 136.012 1.00 37.96 N
ATOM 15 C8 A A2442 76.225 131.504 136.335 1.00 37.79 C
ATOM 16 N7 A A2442 76.523 132.737 136.654 1.00 38.45 N
ATOM 17 C5 A A2442 75.317 133.412 136.538 1.00 38.19 C
ATOM 18 C6 A A2442 74.966 134.758 136.743 1.00 39.44 C
ATOM 19 N6 A A2442 75.838 135.699 137.130 1.00 37.93 N
ATOM 20 N1 A A2442 73.674 135.109 136.539 1.00 37.68 N
ATOM 21 C2 A A2442 72.810 134.161 136.160 1.00 36.59 C
ATOM 22 N3 A A2442 73.020 132.864 135.939 1.00 36.98 N
ATOM 23 C4 A A2442 74.308 132.550 136.147 1.00 37.25 C
ATOM 24 P G A2443 73.281 126.669 132.879 1.00 43.24 P
ATOM 25 OP1 G A2443 74.609 126.309 132.304 1.00 42.94 O
ATOM 26 OP2 G A2443 72.291 127.399 132.047 1.00 45.46 O
ATOM 27 O5' G A2443 72.646 125.306 133.378 1.00 38.32 O
TER

ATOM 1 O3' A B2437 86.909 135.033 139.671 1.00 46.76 O
ATOM 2 P U B2438 85.907 134.909 140.920 1.00 50.89 P
ATOM 3 OP1 U B2438 86.563 135.640 142.041 1.00 52.40 O
ATOM 4 OP2 U B2438 85.468 133.499 141.110 1.00 47.31 O
ATOM 5 O5' U B2438 84.654 135.772 140.467 1.00 47.93 O
ATOM 6 C5' U B2438 83.363 135.534 141.009 1.00 44.85 C
ATOM 7 C4' U B2438 82.362 136.396 140.298 1.00 43.44 C
ATOM 8 O4' U B2438 82.386 136.092 138.875 1.00 42.20 O
ATOM 9 C3' U B2438 80.924 136.163 140.699 1.00 41.93 C
ATOM 10 O3' U B2438 80.596 136.835 141.897 1.00 42.78 O
ATOM 11 C2' U B2438 80.190 136.683 139.481 1.00 41.50 C
ATOM 12 O2' U B2438 80.222 138.090 139.405 1.00 41.98 O
ATOM 13 C1' U B2438 81.059 136.101 138.367 1.00 42.88 C
ATOM 14 N1 U B2438 80.656 134.711 138.082 1.00 44.62 N
ATOM 15 C2 U B2438 79.396 134.507 137.546 1.00 45.07 C
ATOM 16 O2 U B2438 78.653 135.422 137.231 1.00 46.05 O
ATOM 17 N3 U B2438 79.040 133.192 137.383 1.00 45.32 N
ATOM 18 C4 U B2438 79.799 132.083 137.669 1.00 45.65 C
ATOM 19 O4 U B2438 79.314 130.963 137.507 1.00 45.98 O
ATOM 20 C5 U B2438 81.104 132.369 138.179 1.00 44.71 C
ATOM 21 C6 U B2438 81.479 133.638 138.364 1.00 44.47 C
ATOM 22 P U B2439 79.815 136.042 143.049 1.00 43.24 P
ATOM 23 OP1 U B2439 79.350 137.020 144.063 1.00 43.24 O
ATOM 24 OP2 U B2439 80.632 134.877 143.463 1.00 39.72 O
ATOM 25 O5' U B2439 78.523 135.488 142.316 1.00 44.06 O
TER

Atoms:
OP1: (76.613,125.398,138.564)
OP2: (76.555,127.214,140.367)
C3': (74.764,127.983,134.590)
C1': (74.261,130.068,135.604)
C5': (76.330,127.580,136.581)
O4': (74.453,129.129,136.646)
C8: (76.225,131.504,136.335)
O2': (74.297,129.935,133.182)
C6: (74.966,134.758,136.743)
C5: (75.317,133.412,136.538)
C4: (74.308,132.550,136.147)
P: (76.097,126.697,139.060)
C4': (74.927,127.870,136.097)
C2': (74.924,129.479,134.358)
C2: (72.810,134.161,136.160)
N1: (73.674,135.109,136.539)
N3: (73.020,132.864,135.939)
N6: (75.838,135.699,137.130)
N7: (76.523,132.737,136.654)
N9: (74.901,131.319,136.012)
O5': (76.424,127.830,137.991)
O3': (73.469,127.539,134.216)
C4: (79.799,132.083,137.669)
N3: (79.040,133.192,137.383)
OP1: (86.563,135.640,142.041)
OP2: (85.468,133.499,141.110)
C2: (79.396,134.507,137.546)
C1': (81.059,136.101,138.367)
C3': (80.924,136.163,140.699)
O5': (84.654,135.772,140.467)
O4': (82.386,136.092,138.875)
C5': (83.363,135.534,141.009)
P: (85.907,134.909,140.920)
C4': (82.362,136.396,140.298)
C2': (80.190,136.683,139.481)
O2': (80.222,138.090,139.405)
N1: (80.656,134.711,138.082)
O4: (79.314,130.963,137.507)
O2: (78.653,135.422,137.231)
C6: (81.479,133.638,138.364)
C5: (81.104,132.369,138.179)
O3': (80.596,136.835,141.897)
Image (generated by PyMOL):
PyMOL image
show in jmol