Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:X2:X3
Extra
PDB:
ATOM 1 O3' G A 1 108.761 -37.753 -13.046 1.00 93.34 O
ATOM 2 P C A 2 109.711 -36.605 -13.643 1.00 95.37 P
ATOM 3 OP1 C A 2 111.091 -37.143 -13.760 1.00 96.29 O
ATOM 4 OP2 C A 2 109.475 -35.365 -12.865 1.00 94.58 O
ATOM 5 O5' C A 2 109.154 -36.362 -15.112 1.00 95.60 O
ATOM 6 C5' C A 2 109.424 -35.137 -15.768 1.00 97.29 C
ATOM 7 C4' C A 2 108.136 -34.456 -16.163 1.00 99.01 C
ATOM 8 O4' C A 2 107.113 -34.638 -15.143 1.00 98.95 O
ATOM 9 C3' C A 2 108.268 -32.953 -16.300 1.00 99.79 C
ATOM 10 O3' C A 2 108.834 -32.565 -17.543 1.00100.33 O
ATOM 11 C2' C A 2 106.842 -32.467 -16.078 1.00 99.59 C
ATOM 12 O2' C A 2 106.042 -32.567 -17.244 1.00100.06 O
ATOM 13 C1' C A 2 106.346 -33.443 -15.002 1.00 98.94 C
ATOM 14 N1 C A 2 106.526 -32.954 -13.613 1.00 98.37 N
ATOM 15 C2 C A 2 106.247 -31.602 -13.287 1.00 97.74 C
ATOM 16 O2 C A 2 105.773 -30.849 -14.147 1.00 96.91 O
ATOM 17 N3 C A 2 106.499 -31.164 -12.031 1.00 97.92 N
ATOM 18 C4 C A 2 106.986 -32.006 -11.112 1.00 98.56 C
ATOM 19 N4 C A 2 107.242 -31.528 -9.887 1.00 98.11 N
ATOM 20 C5 C A 2 107.239 -33.378 -11.405 1.00 99.00 C
ATOM 21 C6 C A 2 106.992 -33.804 -12.649 1.00 99.03 C
ATOM 22 P G A 3 110.054 -31.518 -17.551 1.00100.02 P
ATOM 23 OP1 G A 3 110.442 -31.232 -18.961 1.00 99.71 O
ATOM 24 OP2 G A 3 111.067 -32.063 -16.607 1.00 99.59 O
ATOM 25 O5' G A 3 109.416 -30.200 -16.914 1.00 98.59 O
TER
ATOM 1 O3' C B 2 108.834 -32.565 -17.543 1.00100.33 O
ATOM 2 P G B 3 110.054 -31.518 -17.551 1.00100.02 P
ATOM 3 OP1 G B 3 110.442 -31.232 -18.961 1.00 99.71 O
ATOM 4 OP2 G B 3 111.067 -32.063 -16.607 1.00 99.59 O
ATOM 5 O5' G B 3 109.416 -30.200 -16.914 1.00 98.59 O
ATOM 6 C5' G B 3 108.280 -29.582 -17.521 1.00 96.35 C
ATOM 7 C4' G B 3 107.976 -28.246 -16.877 1.00 94.80 C
ATOM 8 O4' G B 3 107.426 -28.430 -15.551 1.00 95.33 O
ATOM 9 C3' G B 3 109.138 -27.293 -16.658 1.00 94.41 C
ATOM 10 O3' G B 3 109.466 -26.584 -17.841 1.00 95.64 O
ATOM 11 C2' G B 3 108.607 -26.354 -15.581 1.00 93.45 C
ATOM 12 O2' G B 3 107.828 -25.306 -16.114 1.00 92.76 O
ATOM 13 C1' G B 3 107.695 -27.276 -14.774 1.00 94.07 C
ATOM 14 N9 G B 3 108.237 -27.666 -13.476 1.00 93.99 N
ATOM 15 C8 G B 3 108.662 -28.910 -13.068 1.00 93.71 C
ATOM 16 N7 G B 3 109.072 -28.927 -11.827 1.00 94.03 N
ATOM 17 C5 G B 3 108.916 -27.614 -11.395 1.00 93.92 C
ATOM 18 C6 G B 3 109.185 -27.007 -10.122 1.00 93.56 C
ATOM 19 O6 G B 3 109.632 -27.530 -9.090 1.00 93.28 O
ATOM 20 N1 G B 3 108.870 -25.652 -10.128 1.00 92.51 N
ATOM 21 C2 G B 3 108.360 -24.967 -11.203 1.00 92.37 C
ATOM 22 N2 G B 3 108.114 -23.670 -11.015 1.00 91.65 N
ATOM 23 N3 G B 3 108.106 -25.513 -12.380 1.00 93.02 N
ATOM 24 C4 G B 3 108.406 -26.826 -12.404 1.00 93.57 C
ATOM 25 P G B 4 110.935 -25.946 -17.999 1.00 96.34 P
ATOM 26 OP1 G B 4 111.073 -25.552 -19.431 1.00 94.95 O
ATOM 27 OP2 G B 4 111.916 -26.904 -17.403 1.00 95.86 O
ATOM 28 O5' G B 4 110.882 -24.637 -17.073 1.00 94.46 O
TER
ATOM 2 P C A 2 109.711 -36.605 -13.643 1.00 95.37 P
ATOM 3 OP1 C A 2 111.091 -37.143 -13.760 1.00 96.29 O
ATOM 4 OP2 C A 2 109.475 -35.365 -12.865 1.00 94.58 O
ATOM 5 O5' C A 2 109.154 -36.362 -15.112 1.00 95.60 O
ATOM 6 C5' C A 2 109.424 -35.137 -15.768 1.00 97.29 C
ATOM 7 C4' C A 2 108.136 -34.456 -16.163 1.00 99.01 C
ATOM 8 O4' C A 2 107.113 -34.638 -15.143 1.00 98.95 O
ATOM 9 C3' C A 2 108.268 -32.953 -16.300 1.00 99.79 C
ATOM 10 O3' C A 2 108.834 -32.565 -17.543 1.00100.33 O
ATOM 11 C2' C A 2 106.842 -32.467 -16.078 1.00 99.59 C
ATOM 12 O2' C A 2 106.042 -32.567 -17.244 1.00100.06 O
ATOM 13 C1' C A 2 106.346 -33.443 -15.002 1.00 98.94 C
ATOM 14 N1 C A 2 106.526 -32.954 -13.613 1.00 98.37 N
ATOM 15 C2 C A 2 106.247 -31.602 -13.287 1.00 97.74 C
ATOM 16 O2 C A 2 105.773 -30.849 -14.147 1.00 96.91 O
ATOM 17 N3 C A 2 106.499 -31.164 -12.031 1.00 97.92 N
ATOM 18 C4 C A 2 106.986 -32.006 -11.112 1.00 98.56 C
ATOM 19 N4 C A 2 107.242 -31.528 -9.887 1.00 98.11 N
ATOM 20 C5 C A 2 107.239 -33.378 -11.405 1.00 99.00 C
ATOM 21 C6 C A 2 106.992 -33.804 -12.649 1.00 99.03 C
ATOM 22 P G A 3 110.054 -31.518 -17.551 1.00100.02 P
ATOM 23 OP1 G A 3 110.442 -31.232 -18.961 1.00 99.71 O
ATOM 24 OP2 G A 3 111.067 -32.063 -16.607 1.00 99.59 O
ATOM 25 O5' G A 3 109.416 -30.200 -16.914 1.00 98.59 O
TER
ATOM 1 O3' C B 2 108.834 -32.565 -17.543 1.00100.33 O
ATOM 2 P G B 3 110.054 -31.518 -17.551 1.00100.02 P
ATOM 3 OP1 G B 3 110.442 -31.232 -18.961 1.00 99.71 O
ATOM 4 OP2 G B 3 111.067 -32.063 -16.607 1.00 99.59 O
ATOM 5 O5' G B 3 109.416 -30.200 -16.914 1.00 98.59 O
ATOM 6 C5' G B 3 108.280 -29.582 -17.521 1.00 96.35 C
ATOM 7 C4' G B 3 107.976 -28.246 -16.877 1.00 94.80 C
ATOM 8 O4' G B 3 107.426 -28.430 -15.551 1.00 95.33 O
ATOM 9 C3' G B 3 109.138 -27.293 -16.658 1.00 94.41 C
ATOM 10 O3' G B 3 109.466 -26.584 -17.841 1.00 95.64 O
ATOM 11 C2' G B 3 108.607 -26.354 -15.581 1.00 93.45 C
ATOM 12 O2' G B 3 107.828 -25.306 -16.114 1.00 92.76 O
ATOM 13 C1' G B 3 107.695 -27.276 -14.774 1.00 94.07 C
ATOM 14 N9 G B 3 108.237 -27.666 -13.476 1.00 93.99 N
ATOM 15 C8 G B 3 108.662 -28.910 -13.068 1.00 93.71 C
ATOM 16 N7 G B 3 109.072 -28.927 -11.827 1.00 94.03 N
ATOM 17 C5 G B 3 108.916 -27.614 -11.395 1.00 93.92 C
ATOM 18 C6 G B 3 109.185 -27.007 -10.122 1.00 93.56 C
ATOM 19 O6 G B 3 109.632 -27.530 -9.090 1.00 93.28 O
ATOM 20 N1 G B 3 108.870 -25.652 -10.128 1.00 92.51 N
ATOM 21 C2 G B 3 108.360 -24.967 -11.203 1.00 92.37 C
ATOM 22 N2 G B 3 108.114 -23.670 -11.015 1.00 91.65 N
ATOM 23 N3 G B 3 108.106 -25.513 -12.380 1.00 93.02 N
ATOM 24 C4 G B 3 108.406 -26.826 -12.404 1.00 93.57 C
ATOM 25 P G B 4 110.935 -25.946 -17.999 1.00 96.34 P
ATOM 26 OP1 G B 4 111.073 -25.552 -19.431 1.00 94.95 O
ATOM 27 OP2 G B 4 111.916 -26.904 -17.403 1.00 95.86 O
ATOM 28 O5' G B 4 110.882 -24.637 -17.073 1.00 94.46 O
TER
Atoms:
C2: (106.247,-31.602,-13.287)
OP1: (111.091,-37.143,-13.760)
OP2: (109.475,-35.365,-12.865)
C4: (106.986,-32.006,-11.112)
O5': (109.154,-36.362,-15.112)
C3': (108.268,-32.953,-16.300)
C1': (106.346,-33.443,-15.002)
O4': (107.113,-34.638,-15.143)
C5': (109.424,-35.137,-15.768)
P: (109.711,-36.605,-13.643)
O2: (105.773,-30.849,-14.147)
C4': (108.136,-34.456,-16.163)
C2': (106.842,-32.467,-16.078)
O2': (106.042,-32.567,-17.244)
N1: (106.526,-32.954,-13.613)
N3: (106.499,-31.164,-12.031)
N4: (107.242,-31.528,-9.887)
C6: (106.992,-33.804,-12.649)
C5: (107.239,-33.378,-11.405)
O3': (108.834,-32.565,-17.543)
OP1: (111.091,-37.143,-13.760)
OP2: (109.475,-35.365,-12.865)
C4: (106.986,-32.006,-11.112)
O5': (109.154,-36.362,-15.112)
C3': (108.268,-32.953,-16.300)
C1': (106.346,-33.443,-15.002)
O4': (107.113,-34.638,-15.143)
C5': (109.424,-35.137,-15.768)
P: (109.711,-36.605,-13.643)
O2: (105.773,-30.849,-14.147)
C4': (108.136,-34.456,-16.163)
C2': (106.842,-32.467,-16.078)
O2': (106.042,-32.567,-17.244)
N1: (106.526,-32.954,-13.613)
N3: (106.499,-31.164,-12.031)
N4: (107.242,-31.528,-9.887)
C6: (106.992,-33.804,-12.649)
C5: (107.239,-33.378,-11.405)
O3': (108.834,-32.565,-17.543)
OP1: (110.442,-31.232,-18.961)
OP2: (111.067,-32.063,-16.607)
C3': (109.138,-27.293,-16.658)
C1': (107.695,-27.276,-14.774)
C5': (108.280,-29.582,-17.521)
O6: (109.632,-27.530,-9.090)
O4': (107.426,-28.430,-15.551)
C8: (108.662,-28.910,-13.068)
C2: (108.360,-24.967,-11.203)
C6: (109.185,-27.007,-10.122)
C5: (108.916,-27.614,-11.395)
C4: (108.406,-26.826,-12.404)
P: (110.054,-31.518,-17.551)
C4': (107.976,-28.246,-16.877)
C2': (108.607,-26.354,-15.581)
O2': (107.828,-25.306,-16.114)
N1: (108.870,-25.652,-10.128)
N2: (108.114,-23.670,-11.015)
N3: (108.106,-25.513,-12.380)
N7: (109.072,-28.927,-11.827)
N9: (108.237,-27.666,-13.476)
O5': (109.416,-30.200,-16.914)
O3': (109.466,-26.584,-17.841)
OP2: (111.067,-32.063,-16.607)
C3': (109.138,-27.293,-16.658)
C1': (107.695,-27.276,-14.774)
C5': (108.280,-29.582,-17.521)
O6: (109.632,-27.530,-9.090)
O4': (107.426,-28.430,-15.551)
C8: (108.662,-28.910,-13.068)
C2: (108.360,-24.967,-11.203)
C6: (109.185,-27.007,-10.122)
C5: (108.916,-27.614,-11.395)
C4: (108.406,-26.826,-12.404)
P: (110.054,-31.518,-17.551)
C4': (107.976,-28.246,-16.877)
C2': (108.607,-26.354,-15.581)
O2': (107.828,-25.306,-16.114)
N1: (108.870,-25.652,-10.128)
N2: (108.114,-23.670,-11.015)
N3: (108.106,-25.513,-12.380)
N7: (109.072,-28.927,-11.827)
N9: (108.237,-27.666,-13.476)
O5': (109.416,-30.200,-16.914)
O3': (109.466,-26.584,-17.841)
Image (generated by PyMOL):