Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11977:11978
Extra
PDB:
ATOM 1 O3' G A1976 19.165 -15.945 129.188 1.00 90.85 O
ATOM 2 P U A1977 18.208 -15.479 127.955 1.00 61.69 P
ATOM 3 OP1 U A1977 16.926 -14.992 128.563 1.00 61.99 O
ATOM 4 OP2 U A1977 18.144 -16.621 126.965 1.00 61.34 O
ATOM 5 O5' U A1977 19.007 -14.225 127.316 1.00 61.39 O
ATOM 6 C5' U A1977 20.323 -14.372 126.802 1.00 61.12 C
ATOM 7 C4' U A1977 20.701 -13.298 125.794 1.00 60.73 C
ATOM 8 O4' U A1977 21.240 -13.933 124.615 1.00 60.28 O
ATOM 9 C3' U A1977 19.587 -12.406 125.266 1.00 60.60 C
ATOM 10 O3' U A1977 19.381 -11.271 126.057 1.00 60.91 O
ATOM 11 C2' U A1977 20.069 -12.044 123.883 1.00 60.08 C
ATOM 12 O2' U A1977 21.052 -11.023 123.954 1.00 60.06 O
ATOM 13 C1' U A1977 20.749 -13.320 123.460 1.00 59.89 C
ATOM 14 N1 U A1977 19.828 -14.265 122.773 1.00 59.71 N
ATOM 15 C2 U A1977 19.461 -13.926 121.519 1.00 59.31 C
ATOM 16 O2 U A1977 19.835 -12.896 121.034 1.00 59.12 O
ATOM 17 N3 U A1977 18.660 -14.787 120.835 1.00 59.14 N
ATOM 18 C4 U A1977 18.193 -15.986 121.278 1.00 59.33 C
ATOM 19 O4 U A1977 17.471 -16.644 120.538 1.00 59.15 O
ATOM 20 C5 U A1977 18.611 -16.298 122.607 1.00 59.76 C
ATOM 21 C6 U A1977 19.396 -15.459 123.287 1.00 59.93 C
ATOM 22 P G A1978 17.931 -10.598 126.132 1.00 55.83 P
ATOM 23 OP1 G A1978 18.044 -9.477 127.131 1.00 56.21 O
ATOM 24 OP2 G A1978 16.945 -11.699 126.386 1.00 55.97 O
ATOM 25 O5' G A1978 17.707 -10.014 124.659 1.00 55.32 O
TER
ATOM 1 O3' U B1977 19.381 -11.271 126.057 1.00 60.91 O
ATOM 2 P G B1978 17.931 -10.598 126.132 1.00 55.83 P
ATOM 3 OP1 G B1978 18.044 -9.477 127.131 1.00 56.21 O
ATOM 4 OP2 G B1978 16.945 -11.699 126.386 1.00 55.97 O
ATOM 5 O5' G B1978 17.707 -10.014 124.659 1.00 55.32 O
ATOM 6 C5' G B1978 18.464 -8.928 124.194 1.00 55.13 C
ATOM 7 C4' G B1978 18.251 -8.666 122.723 1.00 54.64 C
ATOM 8 O4' G B1978 18.329 -9.890 121.946 1.00 54.34 O
ATOM 9 C3' G B1978 16.916 -8.112 122.316 1.00 54.61 C
ATOM 10 O3' G B1978 16.736 -6.763 122.678 1.00 54.80 O
ATOM 11 C2' G B1978 16.946 -8.333 120.815 1.00 54.10 C
ATOM 12 O2' G B1978 17.786 -7.370 120.189 1.00 53.86 O
ATOM 13 C1' G B1978 17.628 -9.700 120.733 1.00 53.99 C
ATOM 14 N9 G B1978 16.657 -10.781 120.557 1.00 53.98 N
ATOM 15 C8 G B1978 16.396 -11.831 121.375 1.00 54.26 C
ATOM 16 N7 G B1978 15.464 -12.616 120.899 1.00 54.17 N
ATOM 17 C5 G B1978 15.094 -12.056 119.686 1.00 53.81 C
ATOM 18 C6 G B1978 14.124 -12.428 118.706 1.00 53.58 C
ATOM 19 O6 G B1978 13.348 -13.388 118.703 1.00 53.65 O
ATOM 20 N1 G B1978 14.071 -11.563 117.627 1.00 53.26 N
ATOM 21 C2 G B1978 14.844 -10.463 117.484 1.00 53.16 C
ATOM 22 N2 G B1978 14.660 -9.740 116.388 1.00 52.85 N
ATOM 23 N3 G B1978 15.744 -10.107 118.381 1.00 53.37 N
ATOM 24 C4 G B1978 15.827 -10.924 119.463 1.00 53.69 C
ATOM 25 P A B1979 15.257 -6.200 122.818 1.00 46.16 P
ATOM 26 OP1 A B1979 15.333 -4.944 123.589 1.00 46.48 O
ATOM 27 OP2 A B1979 14.446 -7.289 123.350 1.00 46.36 O
ATOM 28 O5' A B1979 14.853 -5.909 121.301 1.00 45.69 O
TER
ATOM 2 P U A1977 18.208 -15.479 127.955 1.00 61.69 P
ATOM 3 OP1 U A1977 16.926 -14.992 128.563 1.00 61.99 O
ATOM 4 OP2 U A1977 18.144 -16.621 126.965 1.00 61.34 O
ATOM 5 O5' U A1977 19.007 -14.225 127.316 1.00 61.39 O
ATOM 6 C5' U A1977 20.323 -14.372 126.802 1.00 61.12 C
ATOM 7 C4' U A1977 20.701 -13.298 125.794 1.00 60.73 C
ATOM 8 O4' U A1977 21.240 -13.933 124.615 1.00 60.28 O
ATOM 9 C3' U A1977 19.587 -12.406 125.266 1.00 60.60 C
ATOM 10 O3' U A1977 19.381 -11.271 126.057 1.00 60.91 O
ATOM 11 C2' U A1977 20.069 -12.044 123.883 1.00 60.08 C
ATOM 12 O2' U A1977 21.052 -11.023 123.954 1.00 60.06 O
ATOM 13 C1' U A1977 20.749 -13.320 123.460 1.00 59.89 C
ATOM 14 N1 U A1977 19.828 -14.265 122.773 1.00 59.71 N
ATOM 15 C2 U A1977 19.461 -13.926 121.519 1.00 59.31 C
ATOM 16 O2 U A1977 19.835 -12.896 121.034 1.00 59.12 O
ATOM 17 N3 U A1977 18.660 -14.787 120.835 1.00 59.14 N
ATOM 18 C4 U A1977 18.193 -15.986 121.278 1.00 59.33 C
ATOM 19 O4 U A1977 17.471 -16.644 120.538 1.00 59.15 O
ATOM 20 C5 U A1977 18.611 -16.298 122.607 1.00 59.76 C
ATOM 21 C6 U A1977 19.396 -15.459 123.287 1.00 59.93 C
ATOM 22 P G A1978 17.931 -10.598 126.132 1.00 55.83 P
ATOM 23 OP1 G A1978 18.044 -9.477 127.131 1.00 56.21 O
ATOM 24 OP2 G A1978 16.945 -11.699 126.386 1.00 55.97 O
ATOM 25 O5' G A1978 17.707 -10.014 124.659 1.00 55.32 O
TER
ATOM 1 O3' U B1977 19.381 -11.271 126.057 1.00 60.91 O
ATOM 2 P G B1978 17.931 -10.598 126.132 1.00 55.83 P
ATOM 3 OP1 G B1978 18.044 -9.477 127.131 1.00 56.21 O
ATOM 4 OP2 G B1978 16.945 -11.699 126.386 1.00 55.97 O
ATOM 5 O5' G B1978 17.707 -10.014 124.659 1.00 55.32 O
ATOM 6 C5' G B1978 18.464 -8.928 124.194 1.00 55.13 C
ATOM 7 C4' G B1978 18.251 -8.666 122.723 1.00 54.64 C
ATOM 8 O4' G B1978 18.329 -9.890 121.946 1.00 54.34 O
ATOM 9 C3' G B1978 16.916 -8.112 122.316 1.00 54.61 C
ATOM 10 O3' G B1978 16.736 -6.763 122.678 1.00 54.80 O
ATOM 11 C2' G B1978 16.946 -8.333 120.815 1.00 54.10 C
ATOM 12 O2' G B1978 17.786 -7.370 120.189 1.00 53.86 O
ATOM 13 C1' G B1978 17.628 -9.700 120.733 1.00 53.99 C
ATOM 14 N9 G B1978 16.657 -10.781 120.557 1.00 53.98 N
ATOM 15 C8 G B1978 16.396 -11.831 121.375 1.00 54.26 C
ATOM 16 N7 G B1978 15.464 -12.616 120.899 1.00 54.17 N
ATOM 17 C5 G B1978 15.094 -12.056 119.686 1.00 53.81 C
ATOM 18 C6 G B1978 14.124 -12.428 118.706 1.00 53.58 C
ATOM 19 O6 G B1978 13.348 -13.388 118.703 1.00 53.65 O
ATOM 20 N1 G B1978 14.071 -11.563 117.627 1.00 53.26 N
ATOM 21 C2 G B1978 14.844 -10.463 117.484 1.00 53.16 C
ATOM 22 N2 G B1978 14.660 -9.740 116.388 1.00 52.85 N
ATOM 23 N3 G B1978 15.744 -10.107 118.381 1.00 53.37 N
ATOM 24 C4 G B1978 15.827 -10.924 119.463 1.00 53.69 C
ATOM 25 P A B1979 15.257 -6.200 122.818 1.00 46.16 P
ATOM 26 OP1 A B1979 15.333 -4.944 123.589 1.00 46.48 O
ATOM 27 OP2 A B1979 14.446 -7.289 123.350 1.00 46.36 O
ATOM 28 O5' A B1979 14.853 -5.909 121.301 1.00 45.69 O
TER
Atoms:
C4: (18.193,-15.986,121.278)
N3: (18.660,-14.787,120.835)
OP1: (16.926,-14.992,128.563)
OP2: (18.144,-16.621,126.965)
C2: (19.461,-13.926,121.519)
C1': (20.749,-13.320,123.460)
C3': (19.587,-12.406,125.266)
O5': (19.007,-14.225,127.316)
O4': (21.240,-13.933,124.615)
C5': (20.323,-14.372,126.802)
P: (18.208,-15.479,127.955)
C4': (20.701,-13.298,125.794)
C2': (20.069,-12.044,123.883)
O2': (21.052,-11.023,123.954)
N1: (19.828,-14.265,122.773)
O4: (17.471,-16.644,120.538)
O2: (19.835,-12.896,121.034)
C6: (19.396,-15.459,123.287)
C5: (18.611,-16.298,122.607)
O3': (19.381,-11.271,126.057)
N3: (18.660,-14.787,120.835)
OP1: (16.926,-14.992,128.563)
OP2: (18.144,-16.621,126.965)
C2: (19.461,-13.926,121.519)
C1': (20.749,-13.320,123.460)
C3': (19.587,-12.406,125.266)
O5': (19.007,-14.225,127.316)
O4': (21.240,-13.933,124.615)
C5': (20.323,-14.372,126.802)
P: (18.208,-15.479,127.955)
C4': (20.701,-13.298,125.794)
C2': (20.069,-12.044,123.883)
O2': (21.052,-11.023,123.954)
N1: (19.828,-14.265,122.773)
O4: (17.471,-16.644,120.538)
O2: (19.835,-12.896,121.034)
C6: (19.396,-15.459,123.287)
C5: (18.611,-16.298,122.607)
O3': (19.381,-11.271,126.057)
OP1: (18.044,-9.477,127.131)
OP2: (16.945,-11.699,126.386)
C3': (16.916,-8.112,122.316)
C1': (17.628,-9.700,120.733)
C5': (18.464,-8.928,124.194)
O6: (13.348,-13.388,118.703)
O4': (18.329,-9.890,121.946)
C8: (16.396,-11.831,121.375)
C2: (14.844,-10.463,117.484)
C6: (14.124,-12.428,118.706)
C5: (15.094,-12.056,119.686)
C4: (15.827,-10.924,119.463)
P: (17.931,-10.598,126.132)
C4': (18.251,-8.666,122.723)
C2': (16.946,-8.333,120.815)
O2': (17.786,-7.370,120.189)
N1: (14.071,-11.563,117.627)
N2: (14.660,-9.740,116.388)
N3: (15.744,-10.107,118.381)
N7: (15.464,-12.616,120.899)
N9: (16.657,-10.781,120.557)
O5': (17.707,-10.014,124.659)
O3': (16.736,-6.763,122.678)
OP2: (16.945,-11.699,126.386)
C3': (16.916,-8.112,122.316)
C1': (17.628,-9.700,120.733)
C5': (18.464,-8.928,124.194)
O6: (13.348,-13.388,118.703)
O4': (18.329,-9.890,121.946)
C8: (16.396,-11.831,121.375)
C2: (14.844,-10.463,117.484)
C6: (14.124,-12.428,118.706)
C5: (15.094,-12.056,119.686)
C4: (15.827,-10.924,119.463)
P: (17.931,-10.598,126.132)
C4': (18.251,-8.666,122.723)
C2': (16.946,-8.333,120.815)
O2': (17.786,-7.370,120.189)
N1: (14.071,-11.563,117.627)
N2: (14.660,-9.740,116.388)
N3: (15.744,-10.107,118.381)
N7: (15.464,-12.616,120.899)
N9: (16.657,-10.781,120.557)
O5': (17.707,-10.014,124.659)
O3': (16.736,-6.763,122.678)
Image (generated by PyMOL):