Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1EXD:B38:B39
Extra
PDB:
ATOM 1 O3' C A 37 9.003 4.409 19.246 1.00 8.00 O
ATOM 2 P C A 38 9.118 6.005 19.324 1.00 15.00 P
ATOM 3 OP1 C A 38 9.127 6.554 17.941 1.00 8.00 O
ATOM 4 OP2 C A 38 10.240 6.320 20.247 1.00 8.00 O
ATOM 5 O5' C A 38 7.773 6.451 20.036 1.00 8.00 O
ATOM 6 C5' C A 38 7.788 6.884 21.391 1.00 6.00 C
ATOM 7 C4' C A 38 7.221 5.813 22.279 1.00 6.00 C
ATOM 8 O4' C A 38 8.046 4.617 22.227 1.00 8.00 O
ATOM 9 C3' C A 38 7.226 6.195 23.742 1.00 6.00 C
ATOM 10 O3' C A 38 6.095 6.990 24.023 1.00 8.00 O
ATOM 11 C2' C A 38 7.180 4.843 24.433 1.00 6.00 C
ATOM 12 O2' C A 38 5.870 4.308 24.445 1.00 8.00 O
ATOM 13 C1' C A 38 8.089 4.015 23.517 1.00 6.00 C
ATOM 14 N1 C A 38 9.496 3.960 23.965 1.00 7.00 N
ATOM 15 C2 C A 38 9.792 3.525 25.274 1.00 6.00 C
ATOM 16 O2 C A 38 8.872 3.190 26.028 1.00 8.00 O
ATOM 17 N3 C A 38 11.082 3.481 25.679 1.00 7.00 N
ATOM 18 C4 C A 38 12.056 3.843 24.840 1.00 6.00 C
ATOM 19 N4 C A 38 13.314 3.787 25.283 1.00 7.00 N
ATOM 20 C5 C A 38 11.786 4.279 23.509 1.00 6.00 C
ATOM 21 C6 C A 38 10.506 4.324 23.118 1.00 6.00 C
ATOM 22 P G A 39 6.291 8.370 24.802 1.00 15.00 P
ATOM 23 OP1 G A 39 4.973 9.050 24.888 1.00 8.00 O
ATOM 24 OP2 G A 39 7.443 9.070 24.180 1.00 8.00 O
ATOM 25 O5' G A 39 6.709 7.895 26.256 1.00 8.00 O
TER
ATOM 1 O3' C B 38 6.095 6.990 24.023 1.00 8.00 O
ATOM 2 P G B 39 6.291 8.370 24.802 1.00 15.00 P
ATOM 3 OP1 G B 39 4.973 9.050 24.888 1.00 8.00 O
ATOM 4 OP2 G B 39 7.443 9.070 24.180 1.00 8.00 O
ATOM 5 O5' G B 39 6.709 7.895 26.256 1.00 8.00 O
ATOM 6 C5' G B 39 5.761 7.213 27.069 1.00 6.00 C
ATOM 7 C4' G B 39 6.374 6.851 28.383 1.00 6.00 C
ATOM 8 O4' G B 39 7.283 5.742 28.210 1.00 8.00 O
ATOM 9 C3' G B 39 7.242 7.918 29.016 1.00 99.87 C
ATOM 10 O3' G B 39 6.475 8.930 29.645 1.00 97.39 O
ATOM 11 C2' G B 39 8.045 7.098 30.013 1.00 6.00 C
ATOM 12 O2' G B 39 7.358 6.842 31.223 1.00 95.37 O
ATOM 13 C1' G B 39 8.273 5.803 29.221 1.00 6.00 C
ATOM 14 N9 G B 39 9.590 5.802 28.597 1.00 7.00 N
ATOM 15 C8 G B 39 9.907 5.833 27.260 1.00 6.00 C
ATOM 16 N7 G B 39 11.196 5.878 27.047 1.00 7.00 N
ATOM 17 C5 G B 39 11.755 5.868 28.320 1.00 6.00 C
ATOM 18 C6 G B 39 13.111 5.913 28.740 1.00 97.18 C
ATOM 19 O6 G B 39 14.128 5.989 28.049 1.00 95.42 O
ATOM 20 N1 G B 39 13.219 5.865 30.124 1.00 95.20 N
ATOM 21 C2 G B 39 12.160 5.790 30.993 1.00 96.43 C
ATOM 22 N2 G B 39 12.443 5.745 32.294 1.00 98.82 N
ATOM 23 N3 G B 39 10.906 5.760 30.618 1.00 98.36 N
ATOM 24 C4 G B 39 10.776 5.802 29.280 1.00 6.00 C
ATOM 25 P G B 40 7.121 10.378 29.872 1.00 95.85 P
ATOM 26 OP1 G B 40 6.061 11.338 30.267 1.00 96.72 O
ATOM 27 OP2 G B 40 7.948 10.644 28.666 1.00 97.52 O
ATOM 28 O5' G B 40 8.067 10.173 31.134 1.00 88.50 O
TER
ATOM 2 P C A 38 9.118 6.005 19.324 1.00 15.00 P
ATOM 3 OP1 C A 38 9.127 6.554 17.941 1.00 8.00 O
ATOM 4 OP2 C A 38 10.240 6.320 20.247 1.00 8.00 O
ATOM 5 O5' C A 38 7.773 6.451 20.036 1.00 8.00 O
ATOM 6 C5' C A 38 7.788 6.884 21.391 1.00 6.00 C
ATOM 7 C4' C A 38 7.221 5.813 22.279 1.00 6.00 C
ATOM 8 O4' C A 38 8.046 4.617 22.227 1.00 8.00 O
ATOM 9 C3' C A 38 7.226 6.195 23.742 1.00 6.00 C
ATOM 10 O3' C A 38 6.095 6.990 24.023 1.00 8.00 O
ATOM 11 C2' C A 38 7.180 4.843 24.433 1.00 6.00 C
ATOM 12 O2' C A 38 5.870 4.308 24.445 1.00 8.00 O
ATOM 13 C1' C A 38 8.089 4.015 23.517 1.00 6.00 C
ATOM 14 N1 C A 38 9.496 3.960 23.965 1.00 7.00 N
ATOM 15 C2 C A 38 9.792 3.525 25.274 1.00 6.00 C
ATOM 16 O2 C A 38 8.872 3.190 26.028 1.00 8.00 O
ATOM 17 N3 C A 38 11.082 3.481 25.679 1.00 7.00 N
ATOM 18 C4 C A 38 12.056 3.843 24.840 1.00 6.00 C
ATOM 19 N4 C A 38 13.314 3.787 25.283 1.00 7.00 N
ATOM 20 C5 C A 38 11.786 4.279 23.509 1.00 6.00 C
ATOM 21 C6 C A 38 10.506 4.324 23.118 1.00 6.00 C
ATOM 22 P G A 39 6.291 8.370 24.802 1.00 15.00 P
ATOM 23 OP1 G A 39 4.973 9.050 24.888 1.00 8.00 O
ATOM 24 OP2 G A 39 7.443 9.070 24.180 1.00 8.00 O
ATOM 25 O5' G A 39 6.709 7.895 26.256 1.00 8.00 O
TER
ATOM 1 O3' C B 38 6.095 6.990 24.023 1.00 8.00 O
ATOM 2 P G B 39 6.291 8.370 24.802 1.00 15.00 P
ATOM 3 OP1 G B 39 4.973 9.050 24.888 1.00 8.00 O
ATOM 4 OP2 G B 39 7.443 9.070 24.180 1.00 8.00 O
ATOM 5 O5' G B 39 6.709 7.895 26.256 1.00 8.00 O
ATOM 6 C5' G B 39 5.761 7.213 27.069 1.00 6.00 C
ATOM 7 C4' G B 39 6.374 6.851 28.383 1.00 6.00 C
ATOM 8 O4' G B 39 7.283 5.742 28.210 1.00 8.00 O
ATOM 9 C3' G B 39 7.242 7.918 29.016 1.00 99.87 C
ATOM 10 O3' G B 39 6.475 8.930 29.645 1.00 97.39 O
ATOM 11 C2' G B 39 8.045 7.098 30.013 1.00 6.00 C
ATOM 12 O2' G B 39 7.358 6.842 31.223 1.00 95.37 O
ATOM 13 C1' G B 39 8.273 5.803 29.221 1.00 6.00 C
ATOM 14 N9 G B 39 9.590 5.802 28.597 1.00 7.00 N
ATOM 15 C8 G B 39 9.907 5.833 27.260 1.00 6.00 C
ATOM 16 N7 G B 39 11.196 5.878 27.047 1.00 7.00 N
ATOM 17 C5 G B 39 11.755 5.868 28.320 1.00 6.00 C
ATOM 18 C6 G B 39 13.111 5.913 28.740 1.00 97.18 C
ATOM 19 O6 G B 39 14.128 5.989 28.049 1.00 95.42 O
ATOM 20 N1 G B 39 13.219 5.865 30.124 1.00 95.20 N
ATOM 21 C2 G B 39 12.160 5.790 30.993 1.00 96.43 C
ATOM 22 N2 G B 39 12.443 5.745 32.294 1.00 98.82 N
ATOM 23 N3 G B 39 10.906 5.760 30.618 1.00 98.36 N
ATOM 24 C4 G B 39 10.776 5.802 29.280 1.00 6.00 C
ATOM 25 P G B 40 7.121 10.378 29.872 1.00 95.85 P
ATOM 26 OP1 G B 40 6.061 11.338 30.267 1.00 96.72 O
ATOM 27 OP2 G B 40 7.948 10.644 28.666 1.00 97.52 O
ATOM 28 O5' G B 40 8.067 10.173 31.134 1.00 88.50 O
TER
Atoms:
C2: (9.792,3.525,25.274)
OP1: (9.127,6.554,17.941)
OP2: (10.240,6.320,20.247)
C4: (12.056,3.843,24.840)
O5': (7.773,6.451,20.036)
C3': (7.226,6.195,23.742)
C1': (8.089,4.015,23.517)
O4': (8.046,4.617,22.227)
C5': (7.788,6.884,21.391)
P: (9.118,6.005,19.324)
O2: (8.872,3.190,26.028)
C4': (7.221,5.813,22.279)
C2': (7.180,4.843,24.433)
O2': (5.870,4.308,24.445)
N1: (9.496,3.960,23.965)
N3: (11.082,3.481,25.679)
N4: (13.314,3.787,25.283)
C6: (10.506,4.324,23.118)
C5: (11.786,4.279,23.509)
O3': (6.095,6.990,24.023)
OP1: (9.127,6.554,17.941)
OP2: (10.240,6.320,20.247)
C4: (12.056,3.843,24.840)
O5': (7.773,6.451,20.036)
C3': (7.226,6.195,23.742)
C1': (8.089,4.015,23.517)
O4': (8.046,4.617,22.227)
C5': (7.788,6.884,21.391)
P: (9.118,6.005,19.324)
O2: (8.872,3.190,26.028)
C4': (7.221,5.813,22.279)
C2': (7.180,4.843,24.433)
O2': (5.870,4.308,24.445)
N1: (9.496,3.960,23.965)
N3: (11.082,3.481,25.679)
N4: (13.314,3.787,25.283)
C6: (10.506,4.324,23.118)
C5: (11.786,4.279,23.509)
O3': (6.095,6.990,24.023)
OP1: (4.973,9.050,24.888)
OP2: (7.443,9.070,24.180)
C3': (7.242,7.918,29.016)
C1': (8.273,5.803,29.221)
C5': (5.761,7.213,27.069)
O6: (14.128,5.989,28.049)
O4': (7.283,5.742,28.210)
C8: (9.907,5.833,27.260)
C2: (12.160,5.790,30.993)
C6: (13.111,5.913,28.740)
C5: (11.755,5.868,28.320)
C4: (10.776,5.802,29.280)
P: (6.291,8.370,24.802)
C4': (6.374,6.851,28.383)
C2': (8.045,7.098,30.013)
O2': (7.358,6.842,31.223)
N1: (13.219,5.865,30.124)
N2: (12.443,5.745,32.294)
N3: (10.906,5.760,30.618)
N7: (11.196,5.878,27.047)
N9: (9.590,5.802,28.597)
O5': (6.709,7.895,26.256)
O3': (6.475,8.930,29.645)
OP2: (7.443,9.070,24.180)
C3': (7.242,7.918,29.016)
C1': (8.273,5.803,29.221)
C5': (5.761,7.213,27.069)
O6: (14.128,5.989,28.049)
O4': (7.283,5.742,28.210)
C8: (9.907,5.833,27.260)
C2: (12.160,5.790,30.993)
C6: (13.111,5.913,28.740)
C5: (11.755,5.868,28.320)
C4: (10.776,5.802,29.280)
P: (6.291,8.370,24.802)
C4': (6.374,6.851,28.383)
C2': (8.045,7.098,30.013)
O2': (7.358,6.842,31.223)
N1: (13.219,5.865,30.124)
N2: (12.443,5.745,32.294)
N3: (10.906,5.760,30.618)
N7: (11.196,5.878,27.047)
N9: (9.590,5.802,28.597)
O5': (6.709,7.895,26.256)
O3': (6.475,8.930,29.645)
Image (generated by PyMOL):