ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QEK:B19:B18

Extra

PDB:
ATOM 1 O3' G A 18 -20.490 15.423 1.804 1.00 43.07 O
ATOM 2 P C A 19 -21.632 15.835 2.841 1.00 45.06 P
ATOM 3 OP1 C A 19 -22.669 16.570 2.050 1.00 45.16 O
ATOM 4 OP2 C A 19 -21.016 16.477 4.028 1.00 43.11 O
ATOM 5 O5' C A 19 -22.249 14.443 3.306 1.00 44.89 O
ATOM 6 C5' C A 19 -22.967 13.606 2.379 1.00 44.72 C
ATOM 7 C4' C A 19 -23.434 12.347 3.071 1.00 45.22 C
ATOM 8 O4' C A 19 -22.279 11.535 3.429 1.00 44.08 O
ATOM 9 C3' C A 19 -24.147 12.536 4.400 1.00 46.46 C
ATOM 10 O3' C A 19 -25.513 12.918 4.265 1.00 49.49 O
ATOM 11 C2' C A 19 -23.991 11.156 5.023 1.00 44.93 C
ATOM 12 O2' C A 19 -24.862 10.206 4.449 1.00 44.83 O
ATOM 13 C1' C A 19 -22.552 10.824 4.628 1.00 43.94 C
ATOM 14 N1 C A 19 -21.618 11.277 5.669 1.00 42.10 N
ATOM 15 C2 C A 19 -21.434 10.465 6.783 1.00 41.87 C
ATOM 16 O2 C A 19 -22.056 9.391 6.837 1.00 41.16 O
ATOM 17 N3 C A 19 -20.594 10.870 7.768 1.00 39.48 N
ATOM 18 C4 C A 19 -19.963 12.042 7.664 1.00 39.94 C
ATOM 19 N4 C A 19 -19.149 12.410 8.655 1.00 40.44 N
ATOM 20 C5 C A 19 -20.137 12.893 6.533 1.00 42.54 C
ATOM 21 C6 C A 19 -20.959 12.470 5.565 1.00 42.39 C
ATOM 22 P A A 20 -26.241 13.693 5.469 1.00 50.56 P
ATOM 23 OP1 A A 20 -27.604 14.040 4.987 1.00 51.68 O
ATOM 24 OP2 A A 20 -25.340 14.770 5.956 1.00 50.25 O
ATOM 25 O5' A A 20 -26.388 12.601 6.627 1.00 49.92 O
TER

ATOM 1 O3' A B 17 -14.835 17.456 3.130 1.00 37.04 O
ATOM 2 P G B 18 -16.328 17.571 3.727 1.00 39.38 P
ATOM 3 OP1 G B 18 -16.958 18.799 3.168 1.00 41.75 O
ATOM 4 OP2 G B 18 -16.243 17.403 5.200 1.00 39.52 O
ATOM 5 O5' G B 18 -17.086 16.299 3.131 1.00 39.84 O
ATOM 6 C5' G B 18 -17.351 16.198 1.713 1.00 40.00 C
ATOM 7 C4' G B 18 -18.133 14.940 1.407 1.00 40.81 C
ATOM 8 O4' G B 18 -17.305 13.778 1.655 1.00 39.26 O
ATOM 9 C3' G B 18 -19.364 14.696 2.261 1.00 41.46 C
ATOM 10 O3' G B 18 -20.490 15.423 1.804 1.00 43.07 O
ATOM 11 C2' G B 18 -19.554 13.193 2.125 1.00 39.51 C
ATOM 12 O2' G B 18 -20.160 12.821 0.899 1.00 40.62 O
ATOM 13 C1' G B 18 -18.102 12.721 2.159 1.00 37.75 C
ATOM 14 N9 G B 18 -17.659 12.446 3.523 1.00 35.97 N
ATOM 15 C8 G B 18 -16.876 13.247 4.325 1.00 36.61 C
ATOM 16 N7 G B 18 -16.634 12.716 5.496 1.00 32.71 N
ATOM 17 C5 G B 18 -17.301 11.501 5.463 1.00 32.86 C
ATOM 18 C6 G B 18 -17.404 10.495 6.443 1.00 35.39 C
ATOM 19 O6 G B 18 -16.910 10.480 7.574 1.00 33.27 O
ATOM 20 N1 G B 18 -18.179 9.424 6.002 1.00 34.10 N
ATOM 21 C2 G B 18 -18.783 9.341 4.773 1.00 34.71 C
ATOM 22 N2 G B 18 -19.485 8.224 4.527 1.00 32.99 N
ATOM 23 N3 G B 18 -18.702 10.283 3.849 1.00 34.28 N
ATOM 24 C4 G B 18 -17.944 11.323 4.256 1.00 34.08 C
ATOM 25 P C B 19 -21.632 15.835 2.841 1.00 45.06 P
ATOM 26 OP1 C B 19 -22.669 16.570 2.050 1.00 45.16 O
ATOM 27 OP2 C B 19 -21.016 16.477 4.028 1.00 43.11 O
ATOM 28 O5' C B 19 -22.249 14.443 3.306 1.00 44.89 O
TER

Atoms:
C2: (-21.434,10.465,6.783)
OP1: (-22.669,16.570,2.050)
OP2: (-21.016,16.477,4.028)
C4: (-19.963,12.042,7.664)
O5': (-22.249,14.443,3.306)
C3': (-24.147,12.536,4.400)
C1': (-22.552,10.824,4.628)
O4': (-22.279,11.535,3.429)
C5': (-22.967,13.606,2.379)
P: (-21.632,15.835,2.841)
O2: (-22.056,9.391,6.837)
C4': (-23.434,12.347,3.071)
C2': (-23.991,11.156,5.023)
O2': (-24.862,10.206,4.449)
N1: (-21.618,11.277,5.669)
N3: (-20.594,10.870,7.768)
N4: (-19.149,12.410,8.655)
C6: (-20.959,12.470,5.565)
C5: (-20.137,12.893,6.533)
O3': (-25.513,12.918,4.265)
OP1: (-16.958,18.799,3.168)
OP2: (-16.243,17.403,5.200)
C3': (-19.364,14.696,2.261)
C1': (-18.102,12.721,2.159)
C5': (-17.351,16.198,1.713)
O6: (-16.910,10.480,7.574)
O4': (-17.305,13.778,1.655)
C8: (-16.876,13.247,4.325)
C2: (-18.783,9.341,4.773)
C6: (-17.404,10.495,6.443)
C5: (-17.301,11.501,5.463)
C4: (-17.944,11.323,4.256)
P: (-16.328,17.571,3.727)
C4': (-18.133,14.940,1.407)
C2': (-19.554,13.193,2.125)
O2': (-20.160,12.821,0.899)
N1: (-18.179,9.424,6.002)
N2: (-19.485,8.224,4.527)
N3: (-18.702,10.283,3.849)
N7: (-16.634,12.716,5.496)
N9: (-17.659,12.446,3.523)
O5': (-17.086,16.299,3.131)
O3': (-20.490,15.423,1.804)
Image (generated by PyMOL):
PyMOL image
show in jmol