Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1230:1229
Extra
PDB:
ATOM 1 O3' G A 229 104.909 -15.296 127.539 1.00 86.66 O
ATOM 2 P C A 230 103.866 -15.664 128.704 1.00 78.32 P
ATOM 3 OP1 C A 230 104.647 -16.420 129.735 1.00 79.07 O
ATOM 4 OP2 C A 230 102.684 -16.318 128.062 1.00 77.68 O
ATOM 5 O5' C A 230 103.454 -14.231 129.265 1.00 78.38 O
ATOM 6 C5' C A 230 104.422 -13.396 129.863 1.00 78.94 C
ATOM 7 C4' C A 230 103.856 -12.055 130.181 1.00 78.86 C
ATOM 8 O4' C A 230 103.373 -11.426 128.972 1.00 78.15 O
ATOM 9 C3' C A 230 102.647 -12.060 131.065 1.00 78.87 C
ATOM 10 O3' C A 230 102.955 -12.273 132.406 1.00 79.59 O
ATOM 11 C2' C A 230 102.036 -10.704 130.784 1.00 78.52 C
ATOM 12 O2' C A 230 102.746 -9.680 131.451 1.00 79.05 O
ATOM 13 C1' C A 230 102.289 -10.584 129.285 1.00 77.93 C
ATOM 14 N1 C A 230 101.129 -11.030 128.532 1.00 77.23 N
ATOM 15 C2 C A 230 100.141 -10.059 128.375 1.00 76.84 C
ATOM 16 O2 C A 230 100.369 -8.916 128.840 1.00 77.11 O
ATOM 17 N3 C A 230 99.011 -10.408 127.704 1.00 76.20 N
ATOM 18 C4 C A 230 98.873 -11.655 127.237 1.00 75.98 C
ATOM 19 N4 C A 230 97.747 -11.933 126.591 1.00 75.36 N
ATOM 20 C5 C A 230 99.867 -12.663 127.412 1.00 76.38 C
ATOM 21 C6 C A 230 100.981 -12.318 128.073 1.00 77.00 C
ATOM 22 P G A 231 101.870 -12.953 133.359 1.00 97.70 P
ATOM 23 OP1 G A 231 102.224 -12.570 134.757 1.00 98.47 O
ATOM 24 OP2 G A 231 101.808 -14.399 132.994 1.00 97.55 O
ATOM 25 O5' G A 231 100.525 -12.235 132.915 1.00 97.04 O
TER
ATOM 1 O3' G B 228 104.212 -17.693 122.225 1.00 88.05 O
ATOM 2 P G B 229 103.229 -17.948 123.475 1.00 84.53 P
ATOM 3 OP1 G B 229 103.605 -19.272 124.060 1.00 84.97 O
ATOM 4 OP2 G B 229 101.813 -17.736 122.979 1.00 83.86 O
ATOM 5 O5' G B 229 103.659 -16.771 124.467 1.00 85.01 O
ATOM 6 C5' G B 229 105.029 -16.416 124.594 1.00 85.49 C
ATOM 7 C4' G B 229 105.218 -15.017 125.135 1.00 85.72 C
ATOM 8 O4' G B 229 104.755 -14.015 124.193 1.00 85.13 O
ATOM 9 C3' G B 229 104.449 -14.650 126.377 1.00 85.98 C
ATOM 10 O3' G B 229 104.909 -15.296 127.539 1.00 86.66 O
ATOM 11 C2' G B 229 104.639 -13.141 126.398 1.00 86.00 C
ATOM 12 O2' G B 229 105.981 -12.815 126.773 1.00 86.60 O
ATOM 13 C1' G B 229 104.464 -12.821 124.915 1.00 85.30 C
ATOM 14 N9 G B 229 103.098 -12.390 124.604 1.00 84.72 N
ATOM 15 C8 G B 229 102.198 -13.152 123.918 1.00 84.17 C
ATOM 16 N7 G B 229 101.041 -12.563 123.736 1.00 83.71 N
ATOM 17 C5 G B 229 101.188 -11.335 124.363 1.00 83.99 C
ATOM 18 C6 G B 229 100.246 -10.287 124.479 1.00 83.73 C
ATOM 19 O6 G B 229 99.100 -10.239 124.054 1.00 83.21 O
ATOM 20 N1 G B 229 100.754 -9.214 125.164 1.00 84.17 N
ATOM 21 C2 G B 229 102.024 -9.180 125.660 1.00 84.77 C
ATOM 22 N2 G B 229 102.304 -8.036 126.282 1.00 85.13 N
ATOM 23 N3 G B 229 102.928 -10.153 125.564 1.00 85.03 N
ATOM 24 C4 G B 229 102.454 -11.209 124.900 1.00 84.61 C
ATOM 25 P C B 230 103.866 -15.664 128.704 1.00 78.32 P
ATOM 26 OP1 C B 230 104.647 -16.420 129.735 1.00 79.07 O
ATOM 27 OP2 C B 230 102.684 -16.318 128.062 1.00 77.68 O
ATOM 28 O5' C B 230 103.454 -14.231 129.265 1.00 78.38 O
TER
ATOM 2 P C A 230 103.866 -15.664 128.704 1.00 78.32 P
ATOM 3 OP1 C A 230 104.647 -16.420 129.735 1.00 79.07 O
ATOM 4 OP2 C A 230 102.684 -16.318 128.062 1.00 77.68 O
ATOM 5 O5' C A 230 103.454 -14.231 129.265 1.00 78.38 O
ATOM 6 C5' C A 230 104.422 -13.396 129.863 1.00 78.94 C
ATOM 7 C4' C A 230 103.856 -12.055 130.181 1.00 78.86 C
ATOM 8 O4' C A 230 103.373 -11.426 128.972 1.00 78.15 O
ATOM 9 C3' C A 230 102.647 -12.060 131.065 1.00 78.87 C
ATOM 10 O3' C A 230 102.955 -12.273 132.406 1.00 79.59 O
ATOM 11 C2' C A 230 102.036 -10.704 130.784 1.00 78.52 C
ATOM 12 O2' C A 230 102.746 -9.680 131.451 1.00 79.05 O
ATOM 13 C1' C A 230 102.289 -10.584 129.285 1.00 77.93 C
ATOM 14 N1 C A 230 101.129 -11.030 128.532 1.00 77.23 N
ATOM 15 C2 C A 230 100.141 -10.059 128.375 1.00 76.84 C
ATOM 16 O2 C A 230 100.369 -8.916 128.840 1.00 77.11 O
ATOM 17 N3 C A 230 99.011 -10.408 127.704 1.00 76.20 N
ATOM 18 C4 C A 230 98.873 -11.655 127.237 1.00 75.98 C
ATOM 19 N4 C A 230 97.747 -11.933 126.591 1.00 75.36 N
ATOM 20 C5 C A 230 99.867 -12.663 127.412 1.00 76.38 C
ATOM 21 C6 C A 230 100.981 -12.318 128.073 1.00 77.00 C
ATOM 22 P G A 231 101.870 -12.953 133.359 1.00 97.70 P
ATOM 23 OP1 G A 231 102.224 -12.570 134.757 1.00 98.47 O
ATOM 24 OP2 G A 231 101.808 -14.399 132.994 1.00 97.55 O
ATOM 25 O5' G A 231 100.525 -12.235 132.915 1.00 97.04 O
TER
ATOM 1 O3' G B 228 104.212 -17.693 122.225 1.00 88.05 O
ATOM 2 P G B 229 103.229 -17.948 123.475 1.00 84.53 P
ATOM 3 OP1 G B 229 103.605 -19.272 124.060 1.00 84.97 O
ATOM 4 OP2 G B 229 101.813 -17.736 122.979 1.00 83.86 O
ATOM 5 O5' G B 229 103.659 -16.771 124.467 1.00 85.01 O
ATOM 6 C5' G B 229 105.029 -16.416 124.594 1.00 85.49 C
ATOM 7 C4' G B 229 105.218 -15.017 125.135 1.00 85.72 C
ATOM 8 O4' G B 229 104.755 -14.015 124.193 1.00 85.13 O
ATOM 9 C3' G B 229 104.449 -14.650 126.377 1.00 85.98 C
ATOM 10 O3' G B 229 104.909 -15.296 127.539 1.00 86.66 O
ATOM 11 C2' G B 229 104.639 -13.141 126.398 1.00 86.00 C
ATOM 12 O2' G B 229 105.981 -12.815 126.773 1.00 86.60 O
ATOM 13 C1' G B 229 104.464 -12.821 124.915 1.00 85.30 C
ATOM 14 N9 G B 229 103.098 -12.390 124.604 1.00 84.72 N
ATOM 15 C8 G B 229 102.198 -13.152 123.918 1.00 84.17 C
ATOM 16 N7 G B 229 101.041 -12.563 123.736 1.00 83.71 N
ATOM 17 C5 G B 229 101.188 -11.335 124.363 1.00 83.99 C
ATOM 18 C6 G B 229 100.246 -10.287 124.479 1.00 83.73 C
ATOM 19 O6 G B 229 99.100 -10.239 124.054 1.00 83.21 O
ATOM 20 N1 G B 229 100.754 -9.214 125.164 1.00 84.17 N
ATOM 21 C2 G B 229 102.024 -9.180 125.660 1.00 84.77 C
ATOM 22 N2 G B 229 102.304 -8.036 126.282 1.00 85.13 N
ATOM 23 N3 G B 229 102.928 -10.153 125.564 1.00 85.03 N
ATOM 24 C4 G B 229 102.454 -11.209 124.900 1.00 84.61 C
ATOM 25 P C B 230 103.866 -15.664 128.704 1.00 78.32 P
ATOM 26 OP1 C B 230 104.647 -16.420 129.735 1.00 79.07 O
ATOM 27 OP2 C B 230 102.684 -16.318 128.062 1.00 77.68 O
ATOM 28 O5' C B 230 103.454 -14.231 129.265 1.00 78.38 O
TER
Atoms:
C2: (100.141,-10.059,128.375)
OP1: (104.647,-16.420,129.735)
OP2: (102.684,-16.318,128.062)
C4: (98.873,-11.655,127.237)
O5': (103.454,-14.231,129.265)
C3': (102.647,-12.060,131.065)
C1': (102.289,-10.584,129.285)
O4': (103.373,-11.426,128.972)
C5': (104.422,-13.396,129.863)
P: (103.866,-15.664,128.704)
O2: (100.369,-8.916,128.840)
C4': (103.856,-12.055,130.181)
C2': (102.036,-10.704,130.784)
O2': (102.746,-9.680,131.451)
N1: (101.129,-11.030,128.532)
N3: (99.011,-10.408,127.704)
N4: (97.747,-11.933,126.591)
C6: (100.981,-12.318,128.073)
C5: (99.867,-12.663,127.412)
O3': (102.955,-12.273,132.406)
OP1: (104.647,-16.420,129.735)
OP2: (102.684,-16.318,128.062)
C4: (98.873,-11.655,127.237)
O5': (103.454,-14.231,129.265)
C3': (102.647,-12.060,131.065)
C1': (102.289,-10.584,129.285)
O4': (103.373,-11.426,128.972)
C5': (104.422,-13.396,129.863)
P: (103.866,-15.664,128.704)
O2: (100.369,-8.916,128.840)
C4': (103.856,-12.055,130.181)
C2': (102.036,-10.704,130.784)
O2': (102.746,-9.680,131.451)
N1: (101.129,-11.030,128.532)
N3: (99.011,-10.408,127.704)
N4: (97.747,-11.933,126.591)
C6: (100.981,-12.318,128.073)
C5: (99.867,-12.663,127.412)
O3': (102.955,-12.273,132.406)
OP1: (103.605,-19.272,124.060)
OP2: (101.813,-17.736,122.979)
C3': (104.449,-14.650,126.377)
C1': (104.464,-12.821,124.915)
C5': (105.029,-16.416,124.594)
O6: (99.100,-10.239,124.054)
O4': (104.755,-14.015,124.193)
C8: (102.198,-13.152,123.918)
C2: (102.024,-9.180,125.660)
C6: (100.246,-10.287,124.479)
C5: (101.188,-11.335,124.363)
C4: (102.454,-11.209,124.900)
P: (103.229,-17.948,123.475)
C4': (105.218,-15.017,125.135)
C2': (104.639,-13.141,126.398)
O2': (105.981,-12.815,126.773)
N1: (100.754,-9.214,125.164)
N2: (102.304,-8.036,126.282)
N3: (102.928,-10.153,125.564)
N7: (101.041,-12.563,123.736)
N9: (103.098,-12.390,124.604)
O5': (103.659,-16.771,124.467)
O3': (104.909,-15.296,127.539)
OP2: (101.813,-17.736,122.979)
C3': (104.449,-14.650,126.377)
C1': (104.464,-12.821,124.915)
C5': (105.029,-16.416,124.594)
O6: (99.100,-10.239,124.054)
O4': (104.755,-14.015,124.193)
C8: (102.198,-13.152,123.918)
C2: (102.024,-9.180,125.660)
C6: (100.246,-10.287,124.479)
C5: (101.188,-11.335,124.363)
C4: (102.454,-11.209,124.900)
P: (103.229,-17.948,123.475)
C4': (105.218,-15.017,125.135)
C2': (104.639,-13.141,126.398)
O2': (105.981,-12.815,126.773)
N1: (100.754,-9.214,125.164)
N2: (102.304,-8.036,126.282)
N3: (102.928,-10.153,125.564)
N7: (101.041,-12.563,123.736)
N9: (103.098,-12.390,124.604)
O5': (103.659,-16.771,124.467)
O3': (104.909,-15.296,127.539)
Image (generated by PyMOL):