Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0281:0347
Extra
PDB:
ATOM 1 O3' G A 280 50.163 126.629 2.186 1.00 93.23 O
ATOM 2 P A A 281 49.999 127.491 3.538 1.00 94.23 P
ATOM 3 OP1 A A 281 48.699 128.214 3.439 1.00 93.45 O
ATOM 4 OP2 A A 281 51.253 128.263 3.762 1.00 93.18 O
ATOM 5 O5' A A 281 49.894 126.380 4.677 1.00 93.00 O
ATOM 6 C5' A A 281 48.665 126.160 5.405 1.00 93.02 C
ATOM 7 C4' A A 281 47.712 125.322 4.583 1.00 92.72 C
ATOM 8 O4' A A 281 48.436 124.230 3.959 1.00 93.07 O
ATOM 9 C3' A A 281 46.602 124.640 5.366 1.00 92.81 C
ATOM 10 O3' A A 281 45.493 125.494 5.633 1.00 92.73 O
ATOM 11 C2' A A 281 46.251 123.466 4.466 1.00 92.73 C
ATOM 12 O2' A A 281 45.445 123.838 3.365 1.00 92.97 O
ATOM 13 C1' A A 281 47.637 123.058 3.965 1.00 92.40 C
ATOM 14 N9 A A 281 48.283 122.078 4.841 1.00 92.12 N
ATOM 15 C8 A A 281 49.455 122.220 5.551 1.00 91.93 C
ATOM 16 N7 A A 281 49.776 121.165 6.257 1.00 91.27 N
ATOM 17 C5 A A 281 48.750 120.266 5.997 1.00 91.47 C
ATOM 18 C6 A A 281 48.506 118.957 6.442 1.00 91.31 C
ATOM 19 N6 A A 281 49.309 118.298 7.287 1.00 90.33 N
ATOM 20 N1 A A 281 47.394 118.337 5.987 1.00 91.23 N
ATOM 21 C2 A A 281 46.589 118.997 5.146 1.00 90.14 C
ATOM 22 N3 A A 281 46.710 120.228 4.658 1.00 90.80 N
ATOM 23 C4 A A 281 47.825 120.815 5.127 1.00 91.42 C
ATOM 24 P C A 282 44.527 125.174 6.881 1.00 92.93 P
ATOM 25 OP1 C A 282 43.572 126.303 7.033 1.00 92.63 O
ATOM 26 OP2 C A 282 45.384 124.777 8.032 1.00 92.86 O
ATOM 27 O5' C A 282 43.706 123.892 6.410 1.00 91.45 O
TER
ATOM 1 O3' G B 346 58.120 122.339 8.268 1.00 94.69 O
ATOM 2 P U B 347 59.060 121.236 7.567 1.00 94.11 P
ATOM 3 OP1 U B 347 60.381 121.181 8.252 1.00 92.98 O
ATOM 4 OP2 U B 347 59.001 121.475 6.102 1.00 94.19 O
ATOM 5 O5' U B 347 58.286 119.867 7.820 1.00 94.29 O
ATOM 6 C5' U B 347 58.344 119.190 9.094 1.00 94.59 C
ATOM 7 C4' U B 347 56.994 118.596 9.426 1.00 94.34 C
ATOM 8 O4' U B 347 56.056 119.667 9.695 1.00 93.64 O
ATOM 9 C3' U B 347 56.347 117.795 8.306 1.00 95.19 C
ATOM 10 O3' U B 347 56.832 116.454 8.300 1.00 97.56 O
ATOM 11 C2' U B 347 54.862 117.879 8.644 1.00 93.87 C
ATOM 12 O2' U B 347 54.456 116.927 9.605 1.00 93.83 O
ATOM 13 C1' U B 347 54.761 119.281 9.260 1.00 92.99 C
ATOM 14 N1 U B 347 54.194 120.349 8.414 1.00 90.84 N
ATOM 15 C2 U B 347 52.892 120.189 7.964 1.00 90.21 C
ATOM 16 O2 U B 347 52.227 119.190 8.192 1.00 90.72 O
ATOM 17 N3 U B 347 52.394 121.247 7.243 1.00 89.91 N
ATOM 18 C4 U B 347 53.044 122.423 6.926 1.00 89.04 C
ATOM 19 O4 U B 347 52.442 123.295 6.292 1.00 86.95 O
ATOM 20 C5 U B 347 54.397 122.499 7.390 1.00 88.77 C
ATOM 21 C6 U B 347 54.916 121.485 8.093 1.00 89.45 C
ATOM 22 P A B 348 57.034 115.674 6.904 1.00 99.75 P
ATOM 23 OP1 A B 348 57.642 114.359 7.263 1.00 99.22 O
ATOM 24 OP2 A B 348 57.738 116.565 5.942 1.00 98.22 O
ATOM 25 O5' A B 348 55.544 115.433 6.377 1.00 97.71 O
TER
ATOM 2 P A A 281 49.999 127.491 3.538 1.00 94.23 P
ATOM 3 OP1 A A 281 48.699 128.214 3.439 1.00 93.45 O
ATOM 4 OP2 A A 281 51.253 128.263 3.762 1.00 93.18 O
ATOM 5 O5' A A 281 49.894 126.380 4.677 1.00 93.00 O
ATOM 6 C5' A A 281 48.665 126.160 5.405 1.00 93.02 C
ATOM 7 C4' A A 281 47.712 125.322 4.583 1.00 92.72 C
ATOM 8 O4' A A 281 48.436 124.230 3.959 1.00 93.07 O
ATOM 9 C3' A A 281 46.602 124.640 5.366 1.00 92.81 C
ATOM 10 O3' A A 281 45.493 125.494 5.633 1.00 92.73 O
ATOM 11 C2' A A 281 46.251 123.466 4.466 1.00 92.73 C
ATOM 12 O2' A A 281 45.445 123.838 3.365 1.00 92.97 O
ATOM 13 C1' A A 281 47.637 123.058 3.965 1.00 92.40 C
ATOM 14 N9 A A 281 48.283 122.078 4.841 1.00 92.12 N
ATOM 15 C8 A A 281 49.455 122.220 5.551 1.00 91.93 C
ATOM 16 N7 A A 281 49.776 121.165 6.257 1.00 91.27 N
ATOM 17 C5 A A 281 48.750 120.266 5.997 1.00 91.47 C
ATOM 18 C6 A A 281 48.506 118.957 6.442 1.00 91.31 C
ATOM 19 N6 A A 281 49.309 118.298 7.287 1.00 90.33 N
ATOM 20 N1 A A 281 47.394 118.337 5.987 1.00 91.23 N
ATOM 21 C2 A A 281 46.589 118.997 5.146 1.00 90.14 C
ATOM 22 N3 A A 281 46.710 120.228 4.658 1.00 90.80 N
ATOM 23 C4 A A 281 47.825 120.815 5.127 1.00 91.42 C
ATOM 24 P C A 282 44.527 125.174 6.881 1.00 92.93 P
ATOM 25 OP1 C A 282 43.572 126.303 7.033 1.00 92.63 O
ATOM 26 OP2 C A 282 45.384 124.777 8.032 1.00 92.86 O
ATOM 27 O5' C A 282 43.706 123.892 6.410 1.00 91.45 O
TER
ATOM 1 O3' G B 346 58.120 122.339 8.268 1.00 94.69 O
ATOM 2 P U B 347 59.060 121.236 7.567 1.00 94.11 P
ATOM 3 OP1 U B 347 60.381 121.181 8.252 1.00 92.98 O
ATOM 4 OP2 U B 347 59.001 121.475 6.102 1.00 94.19 O
ATOM 5 O5' U B 347 58.286 119.867 7.820 1.00 94.29 O
ATOM 6 C5' U B 347 58.344 119.190 9.094 1.00 94.59 C
ATOM 7 C4' U B 347 56.994 118.596 9.426 1.00 94.34 C
ATOM 8 O4' U B 347 56.056 119.667 9.695 1.00 93.64 O
ATOM 9 C3' U B 347 56.347 117.795 8.306 1.00 95.19 C
ATOM 10 O3' U B 347 56.832 116.454 8.300 1.00 97.56 O
ATOM 11 C2' U B 347 54.862 117.879 8.644 1.00 93.87 C
ATOM 12 O2' U B 347 54.456 116.927 9.605 1.00 93.83 O
ATOM 13 C1' U B 347 54.761 119.281 9.260 1.00 92.99 C
ATOM 14 N1 U B 347 54.194 120.349 8.414 1.00 90.84 N
ATOM 15 C2 U B 347 52.892 120.189 7.964 1.00 90.21 C
ATOM 16 O2 U B 347 52.227 119.190 8.192 1.00 90.72 O
ATOM 17 N3 U B 347 52.394 121.247 7.243 1.00 89.91 N
ATOM 18 C4 U B 347 53.044 122.423 6.926 1.00 89.04 C
ATOM 19 O4 U B 347 52.442 123.295 6.292 1.00 86.95 O
ATOM 20 C5 U B 347 54.397 122.499 7.390 1.00 88.77 C
ATOM 21 C6 U B 347 54.916 121.485 8.093 1.00 89.45 C
ATOM 22 P A B 348 57.034 115.674 6.904 1.00 99.75 P
ATOM 23 OP1 A B 348 57.642 114.359 7.263 1.00 99.22 O
ATOM 24 OP2 A B 348 57.738 116.565 5.942 1.00 98.22 O
ATOM 25 O5' A B 348 55.544 115.433 6.377 1.00 97.71 O
TER
Atoms:
OP1: (48.699,128.214,3.439)
OP2: (51.253,128.263,3.762)
C3': (46.602,124.640,5.366)
C1': (47.637,123.058,3.965)
C5': (48.665,126.160,5.405)
O4': (48.436,124.230,3.959)
C8: (49.455,122.220,5.551)
O2': (45.445,123.838,3.365)
C6: (48.506,118.957,6.442)
C5: (48.750,120.266,5.997)
C4: (47.825,120.815,5.127)
P: (49.999,127.491,3.538)
C4': (47.712,125.322,4.583)
C2': (46.251,123.466,4.466)
C2: (46.589,118.997,5.146)
N1: (47.394,118.337,5.987)
N3: (46.710,120.228,4.658)
N6: (49.309,118.298,7.287)
N7: (49.776,121.165,6.257)
N9: (48.283,122.078,4.841)
O5': (49.894,126.380,4.677)
O3': (45.493,125.494,5.633)
OP2: (51.253,128.263,3.762)
C3': (46.602,124.640,5.366)
C1': (47.637,123.058,3.965)
C5': (48.665,126.160,5.405)
O4': (48.436,124.230,3.959)
C8: (49.455,122.220,5.551)
O2': (45.445,123.838,3.365)
C6: (48.506,118.957,6.442)
C5: (48.750,120.266,5.997)
C4: (47.825,120.815,5.127)
P: (49.999,127.491,3.538)
C4': (47.712,125.322,4.583)
C2': (46.251,123.466,4.466)
C2: (46.589,118.997,5.146)
N1: (47.394,118.337,5.987)
N3: (46.710,120.228,4.658)
N6: (49.309,118.298,7.287)
N7: (49.776,121.165,6.257)
N9: (48.283,122.078,4.841)
O5': (49.894,126.380,4.677)
O3': (45.493,125.494,5.633)
C4: (53.044,122.423,6.926)
N3: (52.394,121.247,7.243)
OP1: (60.381,121.181,8.252)
OP2: (59.001,121.475,6.102)
C2: (52.892,120.189,7.964)
C1': (54.761,119.281,9.260)
C3': (56.347,117.795,8.306)
O5': (58.286,119.867,7.820)
O4': (56.056,119.667,9.695)
C5': (58.344,119.190,9.094)
P: (59.060,121.236,7.567)
C4': (56.994,118.596,9.426)
C2': (54.862,117.879,8.644)
O2': (54.456,116.927,9.605)
N1: (54.194,120.349,8.414)
O4: (52.442,123.295,6.292)
O2: (52.227,119.190,8.192)
C6: (54.916,121.485,8.093)
C5: (54.397,122.499,7.390)
O3': (56.832,116.454,8.300)
N3: (52.394,121.247,7.243)
OP1: (60.381,121.181,8.252)
OP2: (59.001,121.475,6.102)
C2: (52.892,120.189,7.964)
C1': (54.761,119.281,9.260)
C3': (56.347,117.795,8.306)
O5': (58.286,119.867,7.820)
O4': (56.056,119.667,9.695)
C5': (58.344,119.190,9.094)
P: (59.060,121.236,7.567)
C4': (56.994,118.596,9.426)
C2': (54.862,117.879,8.644)
O2': (54.456,116.927,9.605)
N1: (54.194,120.349,8.414)
O4: (52.442,123.295,6.292)
O2: (52.227,119.190,8.192)
C6: (54.916,121.485,8.093)
C5: (54.397,122.499,7.390)
O3': (56.832,116.454,8.300)
Image (generated by PyMOL):