Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:B86:B84
Extra
PDB:
ATOM 1 O3' U A 85 -88.293 116.887 173.815 1.00 37.87 O
ATOM 2 P C A 86 -87.099 117.869 173.354 1.00 28.34 P
ATOM 3 OP1 C A 86 -86.007 117.013 172.817 1.00 28.34 O
ATOM 4 OP2 C A 86 -86.802 118.760 174.502 1.00 28.34 O
ATOM 5 O5' C A 86 -87.764 118.720 172.177 1.00 28.34 O
ATOM 6 C5' C A 86 -88.861 119.595 172.433 1.00 28.34 C
ATOM 7 C4' C A 86 -88.537 121.024 172.078 1.00 28.34 C
ATOM 8 O4' C A 86 -88.766 121.864 173.243 1.00 28.34 O
ATOM 9 C3' C A 86 -87.092 121.275 171.662 1.00 28.34 C
ATOM 10 O3' C A 86 -87.035 122.347 170.732 1.00 28.34 O
ATOM 11 C2' C A 86 -86.450 121.721 172.953 1.00 28.34 C
ATOM 12 O2' C A 86 -85.279 122.488 172.786 1.00 28.34 O
ATOM 13 C1' C A 86 -87.571 122.537 173.578 1.00 28.34 C
ATOM 14 N1 C A 86 -87.471 122.620 175.038 1.00 28.71 N
ATOM 15 C2 C A 86 -87.117 123.842 175.628 1.00 28.71 C
ATOM 16 O2 C A 86 -86.955 124.842 174.906 1.00 28.71 O
ATOM 17 N3 C A 86 -86.986 123.905 176.977 1.00 28.71 N
ATOM 18 C4 C A 86 -87.171 122.790 177.708 1.00 28.71 C
ATOM 19 N4 C A 86 -87.035 122.872 179.040 1.00 28.71 N
ATOM 20 C5 C A 86 -87.512 121.531 177.117 1.00 28.71 C
ATOM 21 C6 C A 86 -87.638 121.492 175.787 1.00 28.71 C
ATOM 22 P U A 87 -86.523 122.088 169.236 1.00 60.23 P
ATOM 23 OP1 U A 87 -85.428 121.099 169.308 1.00 60.23 O
ATOM 24 OP2 U A 87 -86.247 123.420 168.626 1.00 60.23 O
ATOM 25 O5' U A 87 -87.793 121.427 168.565 1.00 60.23 O
TER
ATOM 1 O3' G B 83 -90.193 122.831 183.538 1.00 15.09 O
ATOM 2 P G B 84 -88.965 122.247 182.716 1.00 14.21 P
ATOM 3 OP1 G B 84 -88.208 121.361 183.627 1.00 14.21 O
ATOM 4 OP2 G B 84 -88.274 123.398 182.110 1.00 14.21 O
ATOM 5 O5' G B 84 -89.683 121.395 181.577 1.00 14.21 O
ATOM 6 C5' G B 84 -90.469 120.255 181.899 1.00 14.21 C
ATOM 7 C4' G B 84 -91.017 119.591 180.663 1.00 14.21 C
ATOM 8 O4' G B 84 -91.823 120.536 179.924 1.00 14.21 O
ATOM 9 C3' G B 84 -89.984 119.098 179.667 1.00 14.21 C
ATOM 10 O3' G B 84 -89.502 117.805 179.992 1.00 14.21 O
ATOM 11 C2' G B 84 -90.722 119.161 178.329 1.00 14.21 C
ATOM 12 O2' G B 84 -91.492 117.978 178.108 1.00 14.21 O
ATOM 13 C1' G B 84 -91.679 120.334 178.542 1.00 14.21 C
ATOM 14 N9 G B 84 -91.207 121.600 177.951 1.00 14.39 N
ATOM 15 C8 G B 84 -90.725 122.623 178.715 1.00 14.39 C
ATOM 16 N7 G B 84 -90.419 123.694 178.033 1.00 14.39 N
ATOM 17 C5 G B 84 -90.744 123.380 176.725 1.00 14.39 C
ATOM 18 C6 G B 84 -90.619 124.180 175.546 1.00 14.39 C
ATOM 19 O6 G B 84 -90.194 125.352 175.425 1.00 14.39 O
ATOM 20 N1 G B 84 -91.051 123.468 174.434 1.00 14.39 N
ATOM 21 C2 G B 84 -91.540 122.184 174.473 1.00 14.39 C
ATOM 22 N2 G B 84 -91.929 121.658 173.301 1.00 14.39 N
ATOM 23 N3 G B 84 -91.652 121.448 175.573 1.00 14.39 N
ATOM 24 C4 G B 84 -91.246 122.097 176.667 1.00 14.39 C
ATOM 25 P U B 85 -88.188 117.225 179.278 1.00 37.87 P
ATOM 26 OP1 U B 85 -87.558 116.283 180.234 1.00 37.87 O
ATOM 27 OP2 U B 85 -87.398 118.384 178.797 1.00 37.87 O
ATOM 28 O5' U B 85 -88.786 116.425 178.034 1.00 37.87 O
TER
ATOM 2 P C A 86 -87.099 117.869 173.354 1.00 28.34 P
ATOM 3 OP1 C A 86 -86.007 117.013 172.817 1.00 28.34 O
ATOM 4 OP2 C A 86 -86.802 118.760 174.502 1.00 28.34 O
ATOM 5 O5' C A 86 -87.764 118.720 172.177 1.00 28.34 O
ATOM 6 C5' C A 86 -88.861 119.595 172.433 1.00 28.34 C
ATOM 7 C4' C A 86 -88.537 121.024 172.078 1.00 28.34 C
ATOM 8 O4' C A 86 -88.766 121.864 173.243 1.00 28.34 O
ATOM 9 C3' C A 86 -87.092 121.275 171.662 1.00 28.34 C
ATOM 10 O3' C A 86 -87.035 122.347 170.732 1.00 28.34 O
ATOM 11 C2' C A 86 -86.450 121.721 172.953 1.00 28.34 C
ATOM 12 O2' C A 86 -85.279 122.488 172.786 1.00 28.34 O
ATOM 13 C1' C A 86 -87.571 122.537 173.578 1.00 28.34 C
ATOM 14 N1 C A 86 -87.471 122.620 175.038 1.00 28.71 N
ATOM 15 C2 C A 86 -87.117 123.842 175.628 1.00 28.71 C
ATOM 16 O2 C A 86 -86.955 124.842 174.906 1.00 28.71 O
ATOM 17 N3 C A 86 -86.986 123.905 176.977 1.00 28.71 N
ATOM 18 C4 C A 86 -87.171 122.790 177.708 1.00 28.71 C
ATOM 19 N4 C A 86 -87.035 122.872 179.040 1.00 28.71 N
ATOM 20 C5 C A 86 -87.512 121.531 177.117 1.00 28.71 C
ATOM 21 C6 C A 86 -87.638 121.492 175.787 1.00 28.71 C
ATOM 22 P U A 87 -86.523 122.088 169.236 1.00 60.23 P
ATOM 23 OP1 U A 87 -85.428 121.099 169.308 1.00 60.23 O
ATOM 24 OP2 U A 87 -86.247 123.420 168.626 1.00 60.23 O
ATOM 25 O5' U A 87 -87.793 121.427 168.565 1.00 60.23 O
TER
ATOM 1 O3' G B 83 -90.193 122.831 183.538 1.00 15.09 O
ATOM 2 P G B 84 -88.965 122.247 182.716 1.00 14.21 P
ATOM 3 OP1 G B 84 -88.208 121.361 183.627 1.00 14.21 O
ATOM 4 OP2 G B 84 -88.274 123.398 182.110 1.00 14.21 O
ATOM 5 O5' G B 84 -89.683 121.395 181.577 1.00 14.21 O
ATOM 6 C5' G B 84 -90.469 120.255 181.899 1.00 14.21 C
ATOM 7 C4' G B 84 -91.017 119.591 180.663 1.00 14.21 C
ATOM 8 O4' G B 84 -91.823 120.536 179.924 1.00 14.21 O
ATOM 9 C3' G B 84 -89.984 119.098 179.667 1.00 14.21 C
ATOM 10 O3' G B 84 -89.502 117.805 179.992 1.00 14.21 O
ATOM 11 C2' G B 84 -90.722 119.161 178.329 1.00 14.21 C
ATOM 12 O2' G B 84 -91.492 117.978 178.108 1.00 14.21 O
ATOM 13 C1' G B 84 -91.679 120.334 178.542 1.00 14.21 C
ATOM 14 N9 G B 84 -91.207 121.600 177.951 1.00 14.39 N
ATOM 15 C8 G B 84 -90.725 122.623 178.715 1.00 14.39 C
ATOM 16 N7 G B 84 -90.419 123.694 178.033 1.00 14.39 N
ATOM 17 C5 G B 84 -90.744 123.380 176.725 1.00 14.39 C
ATOM 18 C6 G B 84 -90.619 124.180 175.546 1.00 14.39 C
ATOM 19 O6 G B 84 -90.194 125.352 175.425 1.00 14.39 O
ATOM 20 N1 G B 84 -91.051 123.468 174.434 1.00 14.39 N
ATOM 21 C2 G B 84 -91.540 122.184 174.473 1.00 14.39 C
ATOM 22 N2 G B 84 -91.929 121.658 173.301 1.00 14.39 N
ATOM 23 N3 G B 84 -91.652 121.448 175.573 1.00 14.39 N
ATOM 24 C4 G B 84 -91.246 122.097 176.667 1.00 14.39 C
ATOM 25 P U B 85 -88.188 117.225 179.278 1.00 37.87 P
ATOM 26 OP1 U B 85 -87.558 116.283 180.234 1.00 37.87 O
ATOM 27 OP2 U B 85 -87.398 118.384 178.797 1.00 37.87 O
ATOM 28 O5' U B 85 -88.786 116.425 178.034 1.00 37.87 O
TER
Atoms:
C2: (-87.117,123.842,175.628)
OP1: (-86.007,117.013,172.817)
OP2: (-86.802,118.760,174.502)
C4: (-87.171,122.790,177.708)
O5': (-87.764,118.720,172.177)
C3': (-87.092,121.275,171.662)
C1': (-87.571,122.537,173.578)
O4': (-88.766,121.864,173.243)
C5': (-88.861,119.595,172.433)
P: (-87.099,117.869,173.354)
O2: (-86.955,124.842,174.906)
C4': (-88.537,121.024,172.078)
C2': (-86.450,121.721,172.953)
O2': (-85.279,122.488,172.786)
N1: (-87.471,122.620,175.038)
N3: (-86.986,123.905,176.977)
N4: (-87.035,122.872,179.040)
C6: (-87.638,121.492,175.787)
C5: (-87.512,121.531,177.117)
O3': (-87.035,122.347,170.732)
OP1: (-86.007,117.013,172.817)
OP2: (-86.802,118.760,174.502)
C4: (-87.171,122.790,177.708)
O5': (-87.764,118.720,172.177)
C3': (-87.092,121.275,171.662)
C1': (-87.571,122.537,173.578)
O4': (-88.766,121.864,173.243)
C5': (-88.861,119.595,172.433)
P: (-87.099,117.869,173.354)
O2: (-86.955,124.842,174.906)
C4': (-88.537,121.024,172.078)
C2': (-86.450,121.721,172.953)
O2': (-85.279,122.488,172.786)
N1: (-87.471,122.620,175.038)
N3: (-86.986,123.905,176.977)
N4: (-87.035,122.872,179.040)
C6: (-87.638,121.492,175.787)
C5: (-87.512,121.531,177.117)
O3': (-87.035,122.347,170.732)
OP1: (-88.208,121.361,183.627)
OP2: (-88.274,123.398,182.110)
C3': (-89.984,119.098,179.667)
C1': (-91.679,120.334,178.542)
C5': (-90.469,120.255,181.899)
O6: (-90.194,125.352,175.425)
O4': (-91.823,120.536,179.924)
C8: (-90.725,122.623,178.715)
C2: (-91.540,122.184,174.473)
C6: (-90.619,124.180,175.546)
C5: (-90.744,123.380,176.725)
C4: (-91.246,122.097,176.667)
P: (-88.965,122.247,182.716)
C4': (-91.017,119.591,180.663)
C2': (-90.722,119.161,178.329)
O2': (-91.492,117.978,178.108)
N1: (-91.051,123.468,174.434)
N2: (-91.929,121.658,173.301)
N3: (-91.652,121.448,175.573)
N7: (-90.419,123.694,178.033)
N9: (-91.207,121.600,177.951)
O5': (-89.683,121.395,181.577)
O3': (-89.502,117.805,179.992)
OP2: (-88.274,123.398,182.110)
C3': (-89.984,119.098,179.667)
C1': (-91.679,120.334,178.542)
C5': (-90.469,120.255,181.899)
O6: (-90.194,125.352,175.425)
O4': (-91.823,120.536,179.924)
C8: (-90.725,122.623,178.715)
C2: (-91.540,122.184,174.473)
C6: (-90.619,124.180,175.546)
C5: (-90.744,123.380,176.725)
C4: (-91.246,122.097,176.667)
P: (-88.965,122.247,182.716)
C4': (-91.017,119.591,180.663)
C2': (-90.722,119.161,178.329)
O2': (-91.492,117.978,178.108)
N1: (-91.051,123.468,174.434)
N2: (-91.929,121.658,173.301)
N3: (-91.652,121.448,175.573)
N7: (-90.419,123.694,178.033)
N9: (-91.207,121.600,177.951)
O5': (-89.683,121.395,181.577)
O3': (-89.502,117.805,179.992)
Image (generated by PyMOL):