Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y26:X52:X21
Extra
PDB:
ATOM 1 O3' A A 51 52.644 -35.415 -5.022 1.00 58.98 O
ATOM 2 P A A 52 51.411 -36.415 -5.189 1.00 57.32 P
ATOM 3 OP1 A A 52 51.776 -37.696 -4.505 1.00 59.45 O
ATOM 4 OP2 A A 52 51.017 -36.478 -6.608 1.00 57.81 O
ATOM 5 O5' A A 52 50.278 -35.703 -4.333 1.00 53.51 O
ATOM 6 C5' A A 52 50.477 -35.477 -2.939 1.00 53.14 C
ATOM 7 C4' A A 52 49.523 -34.430 -2.398 1.00 52.59 C
ATOM 8 O4' A A 52 49.697 -33.139 -3.086 1.00 53.01 O
ATOM 9 C3' A A 52 48.051 -34.789 -2.556 1.00 52.55 C
ATOM 10 O3' A A 52 47.407 -34.363 -1.372 1.00 52.86 O
ATOM 11 C2' A A 52 47.659 -33.960 -3.800 1.00 51.04 C
ATOM 12 O2' A A 52 46.277 -33.702 -3.882 1.00 49.74 O
ATOM 13 C1' A A 52 48.441 -32.685 -3.546 1.00 51.42 C
ATOM 14 N9 A A 52 48.603 -31.771 -4.690 1.00 52.44 N
ATOM 15 C8 A A 52 48.291 -31.984 -6.004 1.00 51.60 C
ATOM 16 N7 A A 52 48.556 -30.976 -6.796 1.00 52.20 N
ATOM 17 C5 A A 52 49.079 -30.031 -5.939 1.00 52.18 C
ATOM 18 C6 A A 52 49.539 -28.714 -6.153 1.00 52.40 C
ATOM 19 N6 A A 52 49.553 -28.146 -7.365 1.00 52.74 N
ATOM 20 N1 A A 52 49.996 -28.024 -5.080 1.00 52.02 N
ATOM 21 C2 A A 52 49.972 -28.599 -3.872 1.00 51.84 C
ATOM 22 N3 A A 52 49.562 -29.831 -3.560 1.00 52.02 N
ATOM 23 C4 A A 52 49.126 -30.498 -4.645 1.00 51.42 C
ATOM 24 P A A 53 46.046 -34.988 -0.827 1.00 54.37 P
ATOM 25 OP1 A A 53 46.459 -35.883 0.273 1.00 53.24 O
ATOM 26 OP2 A A 53 45.294 -35.535 -1.993 1.00 54.85 O
ATOM 27 O5' A A 53 45.262 -33.734 -0.212 1.00 53.21 O
TER
ATOM 1 O3' A B 20 45.615 -33.227 -15.956 1.00 53.16 O
ATOM 2 P U B 21 47.209 -33.380 -16.052 1.00 54.60 P
ATOM 3 OP1 U B 21 47.505 -33.381 -17.507 1.00 54.96 O
ATOM 4 OP2 U B 21 47.650 -34.548 -15.261 1.00 55.73 O
ATOM 5 O5' U B 21 47.787 -32.037 -15.384 1.00 53.18 O
ATOM 6 C5' U B 21 47.489 -30.728 -15.934 1.00 53.29 C
ATOM 7 C4' U B 21 47.810 -29.636 -14.923 1.00 52.14 C
ATOM 8 O4' U B 21 47.178 -29.961 -13.648 1.00 50.38 O
ATOM 9 C3' U B 21 49.308 -29.459 -14.645 1.00 52.62 C
ATOM 10 O3' U B 21 49.643 -28.093 -14.649 1.00 54.93 O
ATOM 11 C2' U B 21 49.488 -30.052 -13.247 1.00 51.53 C
ATOM 12 O2' U B 21 50.502 -29.454 -12.453 1.00 50.44 O
ATOM 13 C1' U B 21 48.118 -29.795 -12.606 1.00 49.35 C
ATOM 14 N1 U B 21 47.918 -30.791 -11.537 1.00 47.83 N
ATOM 15 C2 U B 21 48.077 -30.403 -10.220 1.00 47.61 C
ATOM 16 O2 U B 21 48.363 -29.259 -9.890 1.00 45.71 O
ATOM 17 N3 U B 21 47.883 -31.418 -9.299 1.00 46.77 N
ATOM 18 C4 U B 21 47.593 -32.762 -9.580 1.00 48.36 C
ATOM 19 O4 U B 21 47.443 -33.582 -8.673 1.00 47.27 O
ATOM 20 C5 U B 21 47.437 -33.081 -10.975 1.00 46.58 C
ATOM 21 C6 U B 21 47.613 -32.101 -11.878 1.00 48.17 C
ATOM 22 P A B 22 50.362 -27.413 -15.928 1.00 56.57 P
ATOM 23 OP1 A B 22 49.590 -27.730 -17.161 1.00 57.42 O
ATOM 24 OP2 A B 22 51.842 -27.653 -15.915 1.00 56.43 O
ATOM 25 O5' A B 22 50.122 -25.892 -15.516 1.00 58.70 O
TER
ATOM 2 P A A 52 51.411 -36.415 -5.189 1.00 57.32 P
ATOM 3 OP1 A A 52 51.776 -37.696 -4.505 1.00 59.45 O
ATOM 4 OP2 A A 52 51.017 -36.478 -6.608 1.00 57.81 O
ATOM 5 O5' A A 52 50.278 -35.703 -4.333 1.00 53.51 O
ATOM 6 C5' A A 52 50.477 -35.477 -2.939 1.00 53.14 C
ATOM 7 C4' A A 52 49.523 -34.430 -2.398 1.00 52.59 C
ATOM 8 O4' A A 52 49.697 -33.139 -3.086 1.00 53.01 O
ATOM 9 C3' A A 52 48.051 -34.789 -2.556 1.00 52.55 C
ATOM 10 O3' A A 52 47.407 -34.363 -1.372 1.00 52.86 O
ATOM 11 C2' A A 52 47.659 -33.960 -3.800 1.00 51.04 C
ATOM 12 O2' A A 52 46.277 -33.702 -3.882 1.00 49.74 O
ATOM 13 C1' A A 52 48.441 -32.685 -3.546 1.00 51.42 C
ATOM 14 N9 A A 52 48.603 -31.771 -4.690 1.00 52.44 N
ATOM 15 C8 A A 52 48.291 -31.984 -6.004 1.00 51.60 C
ATOM 16 N7 A A 52 48.556 -30.976 -6.796 1.00 52.20 N
ATOM 17 C5 A A 52 49.079 -30.031 -5.939 1.00 52.18 C
ATOM 18 C6 A A 52 49.539 -28.714 -6.153 1.00 52.40 C
ATOM 19 N6 A A 52 49.553 -28.146 -7.365 1.00 52.74 N
ATOM 20 N1 A A 52 49.996 -28.024 -5.080 1.00 52.02 N
ATOM 21 C2 A A 52 49.972 -28.599 -3.872 1.00 51.84 C
ATOM 22 N3 A A 52 49.562 -29.831 -3.560 1.00 52.02 N
ATOM 23 C4 A A 52 49.126 -30.498 -4.645 1.00 51.42 C
ATOM 24 P A A 53 46.046 -34.988 -0.827 1.00 54.37 P
ATOM 25 OP1 A A 53 46.459 -35.883 0.273 1.00 53.24 O
ATOM 26 OP2 A A 53 45.294 -35.535 -1.993 1.00 54.85 O
ATOM 27 O5' A A 53 45.262 -33.734 -0.212 1.00 53.21 O
TER
ATOM 1 O3' A B 20 45.615 -33.227 -15.956 1.00 53.16 O
ATOM 2 P U B 21 47.209 -33.380 -16.052 1.00 54.60 P
ATOM 3 OP1 U B 21 47.505 -33.381 -17.507 1.00 54.96 O
ATOM 4 OP2 U B 21 47.650 -34.548 -15.261 1.00 55.73 O
ATOM 5 O5' U B 21 47.787 -32.037 -15.384 1.00 53.18 O
ATOM 6 C5' U B 21 47.489 -30.728 -15.934 1.00 53.29 C
ATOM 7 C4' U B 21 47.810 -29.636 -14.923 1.00 52.14 C
ATOM 8 O4' U B 21 47.178 -29.961 -13.648 1.00 50.38 O
ATOM 9 C3' U B 21 49.308 -29.459 -14.645 1.00 52.62 C
ATOM 10 O3' U B 21 49.643 -28.093 -14.649 1.00 54.93 O
ATOM 11 C2' U B 21 49.488 -30.052 -13.247 1.00 51.53 C
ATOM 12 O2' U B 21 50.502 -29.454 -12.453 1.00 50.44 O
ATOM 13 C1' U B 21 48.118 -29.795 -12.606 1.00 49.35 C
ATOM 14 N1 U B 21 47.918 -30.791 -11.537 1.00 47.83 N
ATOM 15 C2 U B 21 48.077 -30.403 -10.220 1.00 47.61 C
ATOM 16 O2 U B 21 48.363 -29.259 -9.890 1.00 45.71 O
ATOM 17 N3 U B 21 47.883 -31.418 -9.299 1.00 46.77 N
ATOM 18 C4 U B 21 47.593 -32.762 -9.580 1.00 48.36 C
ATOM 19 O4 U B 21 47.443 -33.582 -8.673 1.00 47.27 O
ATOM 20 C5 U B 21 47.437 -33.081 -10.975 1.00 46.58 C
ATOM 21 C6 U B 21 47.613 -32.101 -11.878 1.00 48.17 C
ATOM 22 P A B 22 50.362 -27.413 -15.928 1.00 56.57 P
ATOM 23 OP1 A B 22 49.590 -27.730 -17.161 1.00 57.42 O
ATOM 24 OP2 A B 22 51.842 -27.653 -15.915 1.00 56.43 O
ATOM 25 O5' A B 22 50.122 -25.892 -15.516 1.00 58.70 O
TER
Atoms:
OP1: (51.776,-37.696,-4.505)
OP2: (51.017,-36.478,-6.608)
C3': (48.051,-34.789,-2.556)
C1': (48.441,-32.685,-3.546)
C5': (50.477,-35.477,-2.939)
O4': (49.697,-33.139,-3.086)
C8: (48.291,-31.984,-6.004)
O2': (46.277,-33.702,-3.882)
C6: (49.539,-28.714,-6.153)
C5: (49.079,-30.031,-5.939)
C4: (49.126,-30.498,-4.645)
P: (51.411,-36.415,-5.189)
C4': (49.523,-34.430,-2.398)
C2': (47.659,-33.960,-3.800)
C2: (49.972,-28.599,-3.872)
N1: (49.996,-28.024,-5.080)
N3: (49.562,-29.831,-3.560)
N6: (49.553,-28.146,-7.365)
N7: (48.556,-30.976,-6.796)
N9: (48.603,-31.771,-4.690)
O5': (50.278,-35.703,-4.333)
O3': (47.407,-34.363,-1.372)
OP2: (51.017,-36.478,-6.608)
C3': (48.051,-34.789,-2.556)
C1': (48.441,-32.685,-3.546)
C5': (50.477,-35.477,-2.939)
O4': (49.697,-33.139,-3.086)
C8: (48.291,-31.984,-6.004)
O2': (46.277,-33.702,-3.882)
C6: (49.539,-28.714,-6.153)
C5: (49.079,-30.031,-5.939)
C4: (49.126,-30.498,-4.645)
P: (51.411,-36.415,-5.189)
C4': (49.523,-34.430,-2.398)
C2': (47.659,-33.960,-3.800)
C2: (49.972,-28.599,-3.872)
N1: (49.996,-28.024,-5.080)
N3: (49.562,-29.831,-3.560)
N6: (49.553,-28.146,-7.365)
N7: (48.556,-30.976,-6.796)
N9: (48.603,-31.771,-4.690)
O5': (50.278,-35.703,-4.333)
O3': (47.407,-34.363,-1.372)
C4: (47.593,-32.762,-9.580)
N3: (47.883,-31.418,-9.299)
OP1: (47.505,-33.381,-17.507)
OP2: (47.650,-34.548,-15.261)
C2: (48.077,-30.403,-10.220)
C1': (48.118,-29.795,-12.606)
C3': (49.308,-29.459,-14.645)
O5': (47.787,-32.037,-15.384)
O4': (47.178,-29.961,-13.648)
C5': (47.489,-30.728,-15.934)
P: (47.209,-33.380,-16.052)
C4': (47.810,-29.636,-14.923)
C2': (49.488,-30.052,-13.247)
O2': (50.502,-29.454,-12.453)
N1: (47.918,-30.791,-11.537)
O4: (47.443,-33.582,-8.673)
O2: (48.363,-29.259,-9.890)
C6: (47.613,-32.101,-11.878)
C5: (47.437,-33.081,-10.975)
O3': (49.643,-28.093,-14.649)
N3: (47.883,-31.418,-9.299)
OP1: (47.505,-33.381,-17.507)
OP2: (47.650,-34.548,-15.261)
C2: (48.077,-30.403,-10.220)
C1': (48.118,-29.795,-12.606)
C3': (49.308,-29.459,-14.645)
O5': (47.787,-32.037,-15.384)
O4': (47.178,-29.961,-13.648)
C5': (47.489,-30.728,-15.934)
P: (47.209,-33.380,-16.052)
C4': (47.810,-29.636,-14.923)
C2': (49.488,-30.052,-13.247)
O2': (50.502,-29.454,-12.453)
N1: (47.918,-30.791,-11.537)
O4: (47.443,-33.582,-8.673)
O2: (48.363,-29.259,-9.890)
C6: (47.613,-32.101,-11.878)
C5: (47.437,-33.081,-10.975)
O3': (49.643,-28.093,-14.649)
Image (generated by PyMOL):