Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:925:924
Extra
PDB:
ATOM 1 O3' G A 24 59.914 6.331 96.045 1.00 94.10 O
ATOM 2 P C A 25 61.213 7.280 96.028 1.00 89.01 P
ATOM 3 OP1 C A 25 61.565 7.467 94.599 1.00 89.23 O
ATOM 4 OP2 C A 25 62.236 6.766 96.974 1.00 88.90 O
ATOM 5 O5' C A 25 60.674 8.663 96.598 1.00 87.18 O
ATOM 6 C5' C A 25 59.628 9.373 95.918 1.00 82.60 C
ATOM 7 C4' C A 25 59.374 10.704 96.582 1.00 79.44 C
ATOM 8 O4' C A 25 58.743 10.515 97.874 1.00 79.13 O
ATOM 9 C3' C A 25 60.595 11.542 96.907 1.00 77.45 C
ATOM 10 O3' C A 25 61.087 12.210 95.757 1.00 75.14 O
ATOM 11 C2' C A 25 60.038 12.511 97.939 1.00 78.25 C
ATOM 12 O2' C A 25 59.285 13.559 97.356 1.00 78.93 O
ATOM 13 C1' C A 25 59.093 11.597 98.727 1.00 78.43 C
ATOM 14 N1 C A 25 59.679 11.065 99.978 1.00 77.39 N
ATOM 15 C2 C A 25 59.879 11.940 101.055 1.00 76.79 C
ATOM 16 O2 C A 25 59.555 13.133 100.936 1.00 77.10 O
ATOM 17 N3 C A 25 60.417 11.466 102.196 1.00 75.94 N
ATOM 18 C4 C A 25 60.748 10.180 102.294 1.00 75.56 C
ATOM 19 N4 C A 25 61.274 9.758 103.444 1.00 76.84 N
ATOM 20 C5 C A 25 60.554 9.269 101.222 1.00 75.38 C
ATOM 21 C6 C A 25 60.023 9.748 100.093 1.00 76.27 C
ATOM 22 P C A 26 62.649 12.550 95.647 1.00 72.99 P
ATOM 23 OP1 C A 26 62.872 13.082 94.275 1.00 70.84 O
ATOM 24 OP2 C A 26 63.424 11.375 96.121 1.00 73.34 O
ATOM 25 O5' C A 26 62.856 13.705 96.719 1.00 72.30 O
TER
ATOM 1 O3' U B 23 61.894 1.999 99.891 1.00127.41 O
ATOM 2 P G B 24 61.902 3.379 99.067 1.00122.46 P
ATOM 3 OP1 G B 24 62.567 3.113 97.761 1.00122.35 O
ATOM 4 OP2 G B 24 62.430 4.450 99.951 1.00122.38 O
ATOM 5 O5' G B 24 60.357 3.674 98.811 1.00117.75 O
ATOM 6 C5' G B 24 59.748 3.457 97.519 1.00110.01 C
ATOM 7 C4' G B 24 58.747 4.553 97.230 1.00103.57 C
ATOM 8 O4' G B 24 57.721 4.535 98.258 1.00102.63 O
ATOM 9 C3' G B 24 59.320 5.961 97.285 1.00 99.78 C
ATOM 10 O3' G B 24 59.914 6.331 96.045 1.00 94.10 O
ATOM 11 C2' G B 24 58.104 6.794 97.667 1.00 99.83 C
ATOM 12 O2' G B 24 57.221 7.029 96.588 1.00 99.19 O
ATOM 13 C1' G B 24 57.418 5.859 98.663 1.00100.65 C
ATOM 14 N9 G B 24 57.864 6.024 100.047 1.00100.98 N
ATOM 15 C8 G B 24 58.565 5.118 100.814 1.00100.81 C
ATOM 16 N7 G B 24 58.790 5.537 102.030 1.00100.47 N
ATOM 17 C5 G B 24 58.208 6.796 102.072 1.00100.90 C
ATOM 18 C6 G B 24 58.115 7.735 103.136 1.00100.73 C
ATOM 19 O6 G B 24 58.516 7.629 104.297 1.00100.69 O
ATOM 20 N1 G B 24 57.462 8.895 102.738 1.00101.12 N
ATOM 21 C2 G B 24 56.949 9.122 101.485 1.00101.66 C
ATOM 22 N2 G B 24 56.369 10.311 101.294 1.00102.05 N
ATOM 23 N3 G B 24 57.006 8.250 100.492 1.00101.75 N
ATOM 24 C4 G B 24 57.646 7.118 100.851 1.00101.26 C
ATOM 25 P C B 25 61.213 7.280 96.028 1.00 89.01 P
ATOM 26 OP1 C B 25 61.565 7.467 94.599 1.00 89.23 O
ATOM 27 OP2 C B 25 62.236 6.766 96.974 1.00 88.90 O
ATOM 28 O5' C B 25 60.674 8.663 96.598 1.00 87.18 O
TER
ATOM 2 P C A 25 61.213 7.280 96.028 1.00 89.01 P
ATOM 3 OP1 C A 25 61.565 7.467 94.599 1.00 89.23 O
ATOM 4 OP2 C A 25 62.236 6.766 96.974 1.00 88.90 O
ATOM 5 O5' C A 25 60.674 8.663 96.598 1.00 87.18 O
ATOM 6 C5' C A 25 59.628 9.373 95.918 1.00 82.60 C
ATOM 7 C4' C A 25 59.374 10.704 96.582 1.00 79.44 C
ATOM 8 O4' C A 25 58.743 10.515 97.874 1.00 79.13 O
ATOM 9 C3' C A 25 60.595 11.542 96.907 1.00 77.45 C
ATOM 10 O3' C A 25 61.087 12.210 95.757 1.00 75.14 O
ATOM 11 C2' C A 25 60.038 12.511 97.939 1.00 78.25 C
ATOM 12 O2' C A 25 59.285 13.559 97.356 1.00 78.93 O
ATOM 13 C1' C A 25 59.093 11.597 98.727 1.00 78.43 C
ATOM 14 N1 C A 25 59.679 11.065 99.978 1.00 77.39 N
ATOM 15 C2 C A 25 59.879 11.940 101.055 1.00 76.79 C
ATOM 16 O2 C A 25 59.555 13.133 100.936 1.00 77.10 O
ATOM 17 N3 C A 25 60.417 11.466 102.196 1.00 75.94 N
ATOM 18 C4 C A 25 60.748 10.180 102.294 1.00 75.56 C
ATOM 19 N4 C A 25 61.274 9.758 103.444 1.00 76.84 N
ATOM 20 C5 C A 25 60.554 9.269 101.222 1.00 75.38 C
ATOM 21 C6 C A 25 60.023 9.748 100.093 1.00 76.27 C
ATOM 22 P C A 26 62.649 12.550 95.647 1.00 72.99 P
ATOM 23 OP1 C A 26 62.872 13.082 94.275 1.00 70.84 O
ATOM 24 OP2 C A 26 63.424 11.375 96.121 1.00 73.34 O
ATOM 25 O5' C A 26 62.856 13.705 96.719 1.00 72.30 O
TER
ATOM 1 O3' U B 23 61.894 1.999 99.891 1.00127.41 O
ATOM 2 P G B 24 61.902 3.379 99.067 1.00122.46 P
ATOM 3 OP1 G B 24 62.567 3.113 97.761 1.00122.35 O
ATOM 4 OP2 G B 24 62.430 4.450 99.951 1.00122.38 O
ATOM 5 O5' G B 24 60.357 3.674 98.811 1.00117.75 O
ATOM 6 C5' G B 24 59.748 3.457 97.519 1.00110.01 C
ATOM 7 C4' G B 24 58.747 4.553 97.230 1.00103.57 C
ATOM 8 O4' G B 24 57.721 4.535 98.258 1.00102.63 O
ATOM 9 C3' G B 24 59.320 5.961 97.285 1.00 99.78 C
ATOM 10 O3' G B 24 59.914 6.331 96.045 1.00 94.10 O
ATOM 11 C2' G B 24 58.104 6.794 97.667 1.00 99.83 C
ATOM 12 O2' G B 24 57.221 7.029 96.588 1.00 99.19 O
ATOM 13 C1' G B 24 57.418 5.859 98.663 1.00100.65 C
ATOM 14 N9 G B 24 57.864 6.024 100.047 1.00100.98 N
ATOM 15 C8 G B 24 58.565 5.118 100.814 1.00100.81 C
ATOM 16 N7 G B 24 58.790 5.537 102.030 1.00100.47 N
ATOM 17 C5 G B 24 58.208 6.796 102.072 1.00100.90 C
ATOM 18 C6 G B 24 58.115 7.735 103.136 1.00100.73 C
ATOM 19 O6 G B 24 58.516 7.629 104.297 1.00100.69 O
ATOM 20 N1 G B 24 57.462 8.895 102.738 1.00101.12 N
ATOM 21 C2 G B 24 56.949 9.122 101.485 1.00101.66 C
ATOM 22 N2 G B 24 56.369 10.311 101.294 1.00102.05 N
ATOM 23 N3 G B 24 57.006 8.250 100.492 1.00101.75 N
ATOM 24 C4 G B 24 57.646 7.118 100.851 1.00101.26 C
ATOM 25 P C B 25 61.213 7.280 96.028 1.00 89.01 P
ATOM 26 OP1 C B 25 61.565 7.467 94.599 1.00 89.23 O
ATOM 27 OP2 C B 25 62.236 6.766 96.974 1.00 88.90 O
ATOM 28 O5' C B 25 60.674 8.663 96.598 1.00 87.18 O
TER
Atoms:
C2: (59.879,11.940,101.055)
OP1: (61.565,7.467,94.599)
OP2: (62.236,6.766,96.974)
C4: (60.748,10.180,102.294)
O5': (60.674,8.663,96.598)
C3': (60.595,11.542,96.907)
C1': (59.093,11.597,98.727)
O4': (58.743,10.515,97.874)
C5': (59.628,9.373,95.918)
P: (61.213,7.280,96.028)
O2: (59.555,13.133,100.936)
C4': (59.374,10.704,96.582)
C2': (60.038,12.511,97.939)
O2': (59.285,13.559,97.356)
N1: (59.679,11.065,99.978)
N3: (60.417,11.466,102.196)
N4: (61.274,9.758,103.444)
C6: (60.023,9.748,100.093)
C5: (60.554,9.269,101.222)
O3': (61.087,12.210,95.757)
OP1: (61.565,7.467,94.599)
OP2: (62.236,6.766,96.974)
C4: (60.748,10.180,102.294)
O5': (60.674,8.663,96.598)
C3': (60.595,11.542,96.907)
C1': (59.093,11.597,98.727)
O4': (58.743,10.515,97.874)
C5': (59.628,9.373,95.918)
P: (61.213,7.280,96.028)
O2: (59.555,13.133,100.936)
C4': (59.374,10.704,96.582)
C2': (60.038,12.511,97.939)
O2': (59.285,13.559,97.356)
N1: (59.679,11.065,99.978)
N3: (60.417,11.466,102.196)
N4: (61.274,9.758,103.444)
C6: (60.023,9.748,100.093)
C5: (60.554,9.269,101.222)
O3': (61.087,12.210,95.757)
OP1: (62.567,3.113,97.761)
OP2: (62.430,4.450,99.951)
C3': (59.320,5.961,97.285)
C1': (57.418,5.859,98.663)
C5': (59.748,3.457,97.519)
O6: (58.516,7.629,104.297)
O4': (57.721,4.535,98.258)
C8: (58.565,5.118,100.814)
C2: (56.949,9.122,101.485)
C6: (58.115,7.735,103.136)
C5: (58.208,6.796,102.072)
C4: (57.646,7.118,100.851)
P: (61.902,3.379,99.067)
C4': (58.747,4.553,97.230)
C2': (58.104,6.794,97.667)
O2': (57.221,7.029,96.588)
N1: (57.462,8.895,102.738)
N2: (56.369,10.311,101.294)
N3: (57.006,8.250,100.492)
N7: (58.790,5.537,102.030)
N9: (57.864,6.024,100.047)
O5': (60.357,3.674,98.811)
O3': (59.914,6.331,96.045)
OP2: (62.430,4.450,99.951)
C3': (59.320,5.961,97.285)
C1': (57.418,5.859,98.663)
C5': (59.748,3.457,97.519)
O6: (58.516,7.629,104.297)
O4': (57.721,4.535,98.258)
C8: (58.565,5.118,100.814)
C2: (56.949,9.122,101.485)
C6: (58.115,7.735,103.136)
C5: (58.208,6.796,102.072)
C4: (57.646,7.118,100.851)
P: (61.902,3.379,99.067)
C4': (58.747,4.553,97.230)
C2': (58.104,6.794,97.667)
O2': (57.221,7.029,96.588)
N1: (57.462,8.895,102.738)
N2: (56.369,10.311,101.294)
N3: (57.006,8.250,100.492)
N7: (58.790,5.537,102.030)
N9: (57.864,6.024,100.047)
O5': (60.357,3.674,98.811)
O3': (59.914,6.331,96.045)
Image (generated by PyMOL):