Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:030:029
Extra
PDB:
ATOM 1 O3' G A 29 48.210 125.053 22.972 1.00 64.69 O
ATOM 2 P C A 30 49.731 124.848 22.461 1.00 65.90 P
ATOM 3 OP1 C A 30 49.688 124.993 20.986 1.00 64.67 O
ATOM 4 OP2 C A 30 50.308 123.611 23.053 1.00 63.71 O
ATOM 5 O5' C A 30 50.532 126.095 23.063 1.00 65.45 O
ATOM 6 C5' C A 30 50.186 127.456 22.705 1.00 64.66 C
ATOM 7 C4' C A 30 50.865 128.448 23.636 1.00 63.73 C
ATOM 8 O4' C A 30 50.422 128.229 25.004 1.00 63.60 O
ATOM 9 C3' C A 30 52.381 128.374 23.720 1.00 62.53 C
ATOM 10 O3' C A 30 53.011 129.096 22.674 1.00 60.69 O
ATOM 11 C2' C A 30 52.661 129.010 25.072 1.00 62.73 C
ATOM 12 O2' C A 30 52.599 130.423 25.010 1.00 62.05 O
ATOM 13 C1' C A 30 51.499 128.458 25.903 1.00 63.14 C
ATOM 14 N1 C A 30 51.816 127.175 26.570 1.00 64.01 N
ATOM 15 C2 C A 30 52.360 127.181 27.870 1.00 63.60 C
ATOM 16 O2 C A 30 52.568 128.265 28.441 1.00 62.66 O
ATOM 17 N3 C A 30 52.643 125.999 28.468 1.00 64.04 N
ATOM 18 C4 C A 30 52.408 124.851 27.825 1.00 65.19 C
ATOM 19 N4 C A 30 52.702 123.708 28.447 1.00 65.34 N
ATOM 20 C5 C A 30 51.861 124.819 26.513 1.00 65.42 C
ATOM 21 C6 C A 30 51.583 125.988 25.930 1.00 65.16 C
ATOM 22 P G A 31 54.534 128.767 22.289 1.00 61.57 P
ATOM 23 OP1 G A 31 54.948 129.752 21.254 1.00 61.25 O
ATOM 24 OP2 G A 31 54.658 127.302 22.009 1.00 59.27 O
ATOM 25 O5' G A 31 55.348 129.114 23.615 1.00 61.16 O
TER
ATOM 1 O3' G B 28 45.737 120.491 26.506 1.00 60.80 O
ATOM 2 P G B 29 47.219 120.818 25.979 1.00 62.90 P
ATOM 3 OP1 G B 29 47.365 120.134 24.671 1.00 64.36 O
ATOM 4 OP2 G B 29 48.206 120.545 27.059 1.00 62.19 O
ATOM 5 O5' G B 29 47.190 122.389 25.711 1.00 60.80 O
ATOM 6 C5' G B 29 46.388 122.935 24.655 1.00 61.06 C
ATOM 7 C4' G B 29 46.510 124.434 24.633 1.00 62.71 C
ATOM 8 O4' G B 29 46.177 124.929 25.958 1.00 62.92 O
ATOM 9 C3' G B 29 47.905 124.987 24.369 1.00 64.13 C
ATOM 10 O3' G B 29 48.210 125.053 22.972 1.00 64.69 O
ATOM 11 C2' G B 29 47.817 126.367 25.009 1.00 64.24 C
ATOM 12 O2' G B 29 47.142 127.304 24.194 1.00 63.89 O
ATOM 13 C1' G B 29 46.973 126.067 26.253 1.00 64.17 C
ATOM 14 N9 G B 29 47.778 125.778 27.440 1.00 63.94 N
ATOM 15 C8 G B 29 48.054 124.545 27.989 1.00 64.90 C
ATOM 16 N7 G B 29 48.817 124.615 29.049 1.00 64.71 N
ATOM 17 C5 G B 29 49.056 125.974 29.212 1.00 63.85 C
ATOM 18 C6 G B 29 49.819 126.666 30.191 1.00 63.28 C
ATOM 19 O6 G B 29 50.466 126.201 31.137 1.00 62.89 O
ATOM 20 N1 G B 29 49.784 128.041 29.985 1.00 62.04 N
ATOM 21 C2 G B 29 49.115 128.671 28.967 1.00 61.11 C
ATOM 22 N2 G B 29 49.201 130.005 28.936 1.00 59.45 N
ATOM 23 N3 G B 29 48.410 128.041 28.047 1.00 61.74 N
ATOM 24 C4 G B 29 48.421 126.705 28.229 1.00 63.03 C
ATOM 25 P C B 30 49.731 124.848 22.461 1.00 65.90 P
ATOM 26 OP1 C B 30 49.688 124.993 20.986 1.00 64.67 O
ATOM 27 OP2 C B 30 50.308 123.611 23.053 1.00 63.71 O
ATOM 28 O5' C B 30 50.532 126.095 23.063 1.00 65.45 O
TER
ATOM 2 P C A 30 49.731 124.848 22.461 1.00 65.90 P
ATOM 3 OP1 C A 30 49.688 124.993 20.986 1.00 64.67 O
ATOM 4 OP2 C A 30 50.308 123.611 23.053 1.00 63.71 O
ATOM 5 O5' C A 30 50.532 126.095 23.063 1.00 65.45 O
ATOM 6 C5' C A 30 50.186 127.456 22.705 1.00 64.66 C
ATOM 7 C4' C A 30 50.865 128.448 23.636 1.00 63.73 C
ATOM 8 O4' C A 30 50.422 128.229 25.004 1.00 63.60 O
ATOM 9 C3' C A 30 52.381 128.374 23.720 1.00 62.53 C
ATOM 10 O3' C A 30 53.011 129.096 22.674 1.00 60.69 O
ATOM 11 C2' C A 30 52.661 129.010 25.072 1.00 62.73 C
ATOM 12 O2' C A 30 52.599 130.423 25.010 1.00 62.05 O
ATOM 13 C1' C A 30 51.499 128.458 25.903 1.00 63.14 C
ATOM 14 N1 C A 30 51.816 127.175 26.570 1.00 64.01 N
ATOM 15 C2 C A 30 52.360 127.181 27.870 1.00 63.60 C
ATOM 16 O2 C A 30 52.568 128.265 28.441 1.00 62.66 O
ATOM 17 N3 C A 30 52.643 125.999 28.468 1.00 64.04 N
ATOM 18 C4 C A 30 52.408 124.851 27.825 1.00 65.19 C
ATOM 19 N4 C A 30 52.702 123.708 28.447 1.00 65.34 N
ATOM 20 C5 C A 30 51.861 124.819 26.513 1.00 65.42 C
ATOM 21 C6 C A 30 51.583 125.988 25.930 1.00 65.16 C
ATOM 22 P G A 31 54.534 128.767 22.289 1.00 61.57 P
ATOM 23 OP1 G A 31 54.948 129.752 21.254 1.00 61.25 O
ATOM 24 OP2 G A 31 54.658 127.302 22.009 1.00 59.27 O
ATOM 25 O5' G A 31 55.348 129.114 23.615 1.00 61.16 O
TER
ATOM 1 O3' G B 28 45.737 120.491 26.506 1.00 60.80 O
ATOM 2 P G B 29 47.219 120.818 25.979 1.00 62.90 P
ATOM 3 OP1 G B 29 47.365 120.134 24.671 1.00 64.36 O
ATOM 4 OP2 G B 29 48.206 120.545 27.059 1.00 62.19 O
ATOM 5 O5' G B 29 47.190 122.389 25.711 1.00 60.80 O
ATOM 6 C5' G B 29 46.388 122.935 24.655 1.00 61.06 C
ATOM 7 C4' G B 29 46.510 124.434 24.633 1.00 62.71 C
ATOM 8 O4' G B 29 46.177 124.929 25.958 1.00 62.92 O
ATOM 9 C3' G B 29 47.905 124.987 24.369 1.00 64.13 C
ATOM 10 O3' G B 29 48.210 125.053 22.972 1.00 64.69 O
ATOM 11 C2' G B 29 47.817 126.367 25.009 1.00 64.24 C
ATOM 12 O2' G B 29 47.142 127.304 24.194 1.00 63.89 O
ATOM 13 C1' G B 29 46.973 126.067 26.253 1.00 64.17 C
ATOM 14 N9 G B 29 47.778 125.778 27.440 1.00 63.94 N
ATOM 15 C8 G B 29 48.054 124.545 27.989 1.00 64.90 C
ATOM 16 N7 G B 29 48.817 124.615 29.049 1.00 64.71 N
ATOM 17 C5 G B 29 49.056 125.974 29.212 1.00 63.85 C
ATOM 18 C6 G B 29 49.819 126.666 30.191 1.00 63.28 C
ATOM 19 O6 G B 29 50.466 126.201 31.137 1.00 62.89 O
ATOM 20 N1 G B 29 49.784 128.041 29.985 1.00 62.04 N
ATOM 21 C2 G B 29 49.115 128.671 28.967 1.00 61.11 C
ATOM 22 N2 G B 29 49.201 130.005 28.936 1.00 59.45 N
ATOM 23 N3 G B 29 48.410 128.041 28.047 1.00 61.74 N
ATOM 24 C4 G B 29 48.421 126.705 28.229 1.00 63.03 C
ATOM 25 P C B 30 49.731 124.848 22.461 1.00 65.90 P
ATOM 26 OP1 C B 30 49.688 124.993 20.986 1.00 64.67 O
ATOM 27 OP2 C B 30 50.308 123.611 23.053 1.00 63.71 O
ATOM 28 O5' C B 30 50.532 126.095 23.063 1.00 65.45 O
TER
Atoms:
C2: (52.360,127.181,27.870)
OP1: (49.688,124.993,20.986)
OP2: (50.308,123.611,23.053)
C4: (52.408,124.851,27.825)
O5': (50.532,126.095,23.063)
C3': (52.381,128.374,23.720)
C1': (51.499,128.458,25.903)
O4': (50.422,128.229,25.004)
C5': (50.186,127.456,22.705)
P: (49.731,124.848,22.461)
O2: (52.568,128.265,28.441)
C4': (50.865,128.448,23.636)
C2': (52.661,129.010,25.072)
O2': (52.599,130.423,25.010)
N1: (51.816,127.175,26.570)
N3: (52.643,125.999,28.468)
N4: (52.702,123.708,28.447)
C6: (51.583,125.988,25.930)
C5: (51.861,124.819,26.513)
O3': (53.011,129.096,22.674)
OP1: (49.688,124.993,20.986)
OP2: (50.308,123.611,23.053)
C4: (52.408,124.851,27.825)
O5': (50.532,126.095,23.063)
C3': (52.381,128.374,23.720)
C1': (51.499,128.458,25.903)
O4': (50.422,128.229,25.004)
C5': (50.186,127.456,22.705)
P: (49.731,124.848,22.461)
O2: (52.568,128.265,28.441)
C4': (50.865,128.448,23.636)
C2': (52.661,129.010,25.072)
O2': (52.599,130.423,25.010)
N1: (51.816,127.175,26.570)
N3: (52.643,125.999,28.468)
N4: (52.702,123.708,28.447)
C6: (51.583,125.988,25.930)
C5: (51.861,124.819,26.513)
O3': (53.011,129.096,22.674)
OP1: (47.365,120.134,24.671)
OP2: (48.206,120.545,27.059)
C3': (47.905,124.987,24.369)
C1': (46.973,126.067,26.253)
C5': (46.388,122.935,24.655)
O6: (50.466,126.201,31.137)
O4': (46.177,124.929,25.958)
C8: (48.054,124.545,27.989)
C2: (49.115,128.671,28.967)
C6: (49.819,126.666,30.191)
C5: (49.056,125.974,29.212)
C4: (48.421,126.705,28.229)
P: (47.219,120.818,25.979)
C4': (46.510,124.434,24.633)
C2': (47.817,126.367,25.009)
O2': (47.142,127.304,24.194)
N1: (49.784,128.041,29.985)
N2: (49.201,130.005,28.936)
N3: (48.410,128.041,28.047)
N7: (48.817,124.615,29.049)
N9: (47.778,125.778,27.440)
O5': (47.190,122.389,25.711)
O3': (48.210,125.053,22.972)
OP2: (48.206,120.545,27.059)
C3': (47.905,124.987,24.369)
C1': (46.973,126.067,26.253)
C5': (46.388,122.935,24.655)
O6: (50.466,126.201,31.137)
O4': (46.177,124.929,25.958)
C8: (48.054,124.545,27.989)
C2: (49.115,128.671,28.967)
C6: (49.819,126.666,30.191)
C5: (49.056,125.974,29.212)
C4: (48.421,126.705,28.229)
P: (47.219,120.818,25.979)
C4': (46.510,124.434,24.633)
C2': (47.817,126.367,25.009)
O2': (47.142,127.304,24.194)
N1: (49.784,128.041,29.985)
N2: (49.201,130.005,28.936)
N3: (48.410,128.041,28.047)
N7: (48.817,124.615,29.049)
N9: (47.778,125.778,27.440)
O5': (47.190,122.389,25.711)
O3': (48.210,125.053,22.972)
Image (generated by PyMOL):