Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XLJ:B12:B13
Extra
PDB:
ATOM 1 O3' G A 11 -18.439 -6.772 -39.211 1.00 92.13 O
ATOM 2 P C A 12 -18.553 -5.516 -38.217 1.00118.94 P
ATOM 3 OP1 C A 12 -17.802 -5.891 -36.995 1.00119.40 O
ATOM 4 OP2 C A 12 -19.986 -5.144 -38.101 1.00118.57 O
ATOM 5 O5' C A 12 -17.769 -4.406 -39.032 1.00 97.69 O
ATOM 6 C5' C A 12 -18.105 -3.040 -38.864 1.00 96.32 C
ATOM 7 C4' C A 12 -18.039 -2.294 -40.170 1.00 97.16 C
ATOM 8 O4' C A 12 -19.029 -2.807 -41.097 1.00 96.92 O
ATOM 9 C3' C A 12 -18.343 -0.811 -40.081 1.00101.78 C
ATOM 10 O3' C A 12 -17.210 -0.076 -39.667 1.00105.07 O
ATOM 11 C2' C A 12 -18.804 -0.470 -41.490 1.00100.80 C
ATOM 12 O2' C A 12 -17.691 -0.288 -42.352 1.00105.18 O
ATOM 13 C1' C A 12 -19.527 -1.755 -41.897 1.00 96.55 C
ATOM 14 N1 C A 12 -20.990 -1.723 -41.703 1.00 92.22 N
ATOM 15 C2 C A 12 -21.755 -0.669 -42.202 1.00 86.92 C
ATOM 16 O2 C A 12 -21.193 0.253 -42.805 1.00 80.19 O
ATOM 17 N3 C A 12 -23.093 -0.681 -42.007 1.00 90.07 N
ATOM 18 C4 C A 12 -23.666 -1.691 -41.352 1.00 94.59 C
ATOM 19 N4 C A 12 -24.988 -1.667 -41.182 1.00 97.52 N
ATOM 20 C5 C A 12 -22.911 -2.779 -40.838 1.00 96.92 C
ATOM 21 C6 C A 12 -21.591 -2.751 -41.039 1.00 94.99 C
ATOM 22 P A A 13 -17.253 0.747 -38.296 1.00 77.61 P
ATOM 23 OP1 A A 13 -15.871 0.717 -37.755 1.00 80.22 O
ATOM 24 OP2 A A 13 -18.372 0.196 -37.487 1.00 77.07 O
ATOM 25 O5' A A 13 -17.613 2.193 -38.851 1.00 83.50 O
TER
ATOM 1 O3' C B 12 -17.210 -0.076 -39.667 1.00105.07 O
ATOM 2 P A B 13 -17.253 0.747 -38.296 1.00 77.61 P
ATOM 3 OP1 A B 13 -15.871 0.717 -37.755 1.00 80.22 O
ATOM 4 OP2 A B 13 -18.372 0.196 -37.487 1.00 77.07 O
ATOM 5 O5' A B 13 -17.613 2.193 -38.851 1.00 83.50 O
ATOM 6 C5' A B 13 -17.022 2.629 -40.067 1.00 85.76 C
ATOM 7 C4' A B 13 -17.841 3.714 -40.715 1.00 86.67 C
ATOM 8 O4' A B 13 -18.973 3.151 -41.425 1.00 88.83 O
ATOM 9 C3' A B 13 -18.470 4.702 -39.750 1.00 89.13 C
ATOM 10 O3' A B 13 -17.551 5.683 -39.321 1.00 91.19 O
ATOM 11 C2' A B 13 -19.633 5.268 -40.548 1.00 86.38 C
ATOM 12 O2' A B 13 -19.169 6.250 -41.463 1.00 82.13 O
ATOM 13 C1' A B 13 -20.071 4.036 -41.340 1.00 87.16 C
ATOM 14 N9 A B 13 -21.206 3.321 -40.727 1.00 86.52 N
ATOM 15 C8 A B 13 -21.188 2.173 -39.973 1.00 84.92 C
ATOM 16 N7 A B 13 -22.379 1.774 -39.591 1.00 87.52 N
ATOM 17 C5 A B 13 -23.237 2.720 -40.139 1.00 89.11 C
ATOM 18 C6 A B 13 -24.633 2.877 -40.108 1.00 92.02 C
ATOM 19 N6 A B 13 -25.461 2.049 -39.474 1.00 97.11 N
ATOM 20 N1 A B 13 -25.160 3.934 -40.761 1.00 88.11 N
ATOM 21 C2 A B 13 -24.338 4.772 -41.399 1.00 84.75 C
ATOM 22 N3 A B 13 -23.015 4.731 -41.500 1.00 82.52 N
ATOM 23 C4 A B 13 -22.525 3.670 -40.843 1.00 85.73 C
ATOM 24 P g B 14 -17.553 6.120 -37.785 1.00 89.34 P
ATOM 25 OP1 g B 14 -16.215 6.710 -37.553 1.00 94.93 O
ATOM 26 OP2 g B 14 -18.052 5.002 -36.947 1.00 89.65 O
ATOM 27 O5' g B 14 -18.653 7.275 -37.774 1.00 82.30 O
TER
ATOM 2 P C A 12 -18.553 -5.516 -38.217 1.00118.94 P
ATOM 3 OP1 C A 12 -17.802 -5.891 -36.995 1.00119.40 O
ATOM 4 OP2 C A 12 -19.986 -5.144 -38.101 1.00118.57 O
ATOM 5 O5' C A 12 -17.769 -4.406 -39.032 1.00 97.69 O
ATOM 6 C5' C A 12 -18.105 -3.040 -38.864 1.00 96.32 C
ATOM 7 C4' C A 12 -18.039 -2.294 -40.170 1.00 97.16 C
ATOM 8 O4' C A 12 -19.029 -2.807 -41.097 1.00 96.92 O
ATOM 9 C3' C A 12 -18.343 -0.811 -40.081 1.00101.78 C
ATOM 10 O3' C A 12 -17.210 -0.076 -39.667 1.00105.07 O
ATOM 11 C2' C A 12 -18.804 -0.470 -41.490 1.00100.80 C
ATOM 12 O2' C A 12 -17.691 -0.288 -42.352 1.00105.18 O
ATOM 13 C1' C A 12 -19.527 -1.755 -41.897 1.00 96.55 C
ATOM 14 N1 C A 12 -20.990 -1.723 -41.703 1.00 92.22 N
ATOM 15 C2 C A 12 -21.755 -0.669 -42.202 1.00 86.92 C
ATOM 16 O2 C A 12 -21.193 0.253 -42.805 1.00 80.19 O
ATOM 17 N3 C A 12 -23.093 -0.681 -42.007 1.00 90.07 N
ATOM 18 C4 C A 12 -23.666 -1.691 -41.352 1.00 94.59 C
ATOM 19 N4 C A 12 -24.988 -1.667 -41.182 1.00 97.52 N
ATOM 20 C5 C A 12 -22.911 -2.779 -40.838 1.00 96.92 C
ATOM 21 C6 C A 12 -21.591 -2.751 -41.039 1.00 94.99 C
ATOM 22 P A A 13 -17.253 0.747 -38.296 1.00 77.61 P
ATOM 23 OP1 A A 13 -15.871 0.717 -37.755 1.00 80.22 O
ATOM 24 OP2 A A 13 -18.372 0.196 -37.487 1.00 77.07 O
ATOM 25 O5' A A 13 -17.613 2.193 -38.851 1.00 83.50 O
TER
ATOM 1 O3' C B 12 -17.210 -0.076 -39.667 1.00105.07 O
ATOM 2 P A B 13 -17.253 0.747 -38.296 1.00 77.61 P
ATOM 3 OP1 A B 13 -15.871 0.717 -37.755 1.00 80.22 O
ATOM 4 OP2 A B 13 -18.372 0.196 -37.487 1.00 77.07 O
ATOM 5 O5' A B 13 -17.613 2.193 -38.851 1.00 83.50 O
ATOM 6 C5' A B 13 -17.022 2.629 -40.067 1.00 85.76 C
ATOM 7 C4' A B 13 -17.841 3.714 -40.715 1.00 86.67 C
ATOM 8 O4' A B 13 -18.973 3.151 -41.425 1.00 88.83 O
ATOM 9 C3' A B 13 -18.470 4.702 -39.750 1.00 89.13 C
ATOM 10 O3' A B 13 -17.551 5.683 -39.321 1.00 91.19 O
ATOM 11 C2' A B 13 -19.633 5.268 -40.548 1.00 86.38 C
ATOM 12 O2' A B 13 -19.169 6.250 -41.463 1.00 82.13 O
ATOM 13 C1' A B 13 -20.071 4.036 -41.340 1.00 87.16 C
ATOM 14 N9 A B 13 -21.206 3.321 -40.727 1.00 86.52 N
ATOM 15 C8 A B 13 -21.188 2.173 -39.973 1.00 84.92 C
ATOM 16 N7 A B 13 -22.379 1.774 -39.591 1.00 87.52 N
ATOM 17 C5 A B 13 -23.237 2.720 -40.139 1.00 89.11 C
ATOM 18 C6 A B 13 -24.633 2.877 -40.108 1.00 92.02 C
ATOM 19 N6 A B 13 -25.461 2.049 -39.474 1.00 97.11 N
ATOM 20 N1 A B 13 -25.160 3.934 -40.761 1.00 88.11 N
ATOM 21 C2 A B 13 -24.338 4.772 -41.399 1.00 84.75 C
ATOM 22 N3 A B 13 -23.015 4.731 -41.500 1.00 82.52 N
ATOM 23 C4 A B 13 -22.525 3.670 -40.843 1.00 85.73 C
ATOM 24 P g B 14 -17.553 6.120 -37.785 1.00 89.34 P
ATOM 25 OP1 g B 14 -16.215 6.710 -37.553 1.00 94.93 O
ATOM 26 OP2 g B 14 -18.052 5.002 -36.947 1.00 89.65 O
ATOM 27 O5' g B 14 -18.653 7.275 -37.774 1.00 82.30 O
TER
Atoms:
C2: (-21.755,-0.669,-42.202)
OP1: (-17.802,-5.891,-36.995)
OP2: (-19.986,-5.144,-38.101)
C4: (-23.666,-1.691,-41.352)
O5': (-17.769,-4.406,-39.032)
C3': (-18.343,-0.811,-40.081)
C1': (-19.527,-1.755,-41.897)
O4': (-19.029,-2.807,-41.097)
C5': (-18.105,-3.040,-38.864)
P: (-18.553,-5.516,-38.217)
O2: (-21.193,0.253,-42.805)
C4': (-18.039,-2.294,-40.170)
C2': (-18.804,-0.470,-41.490)
O2': (-17.691,-0.288,-42.352)
N1: (-20.990,-1.723,-41.703)
N3: (-23.093,-0.681,-42.007)
N4: (-24.988,-1.667,-41.182)
C6: (-21.591,-2.751,-41.039)
C5: (-22.911,-2.779,-40.838)
O3': (-17.210,-0.076,-39.667)
OP1: (-17.802,-5.891,-36.995)
OP2: (-19.986,-5.144,-38.101)
C4: (-23.666,-1.691,-41.352)
O5': (-17.769,-4.406,-39.032)
C3': (-18.343,-0.811,-40.081)
C1': (-19.527,-1.755,-41.897)
O4': (-19.029,-2.807,-41.097)
C5': (-18.105,-3.040,-38.864)
P: (-18.553,-5.516,-38.217)
O2: (-21.193,0.253,-42.805)
C4': (-18.039,-2.294,-40.170)
C2': (-18.804,-0.470,-41.490)
O2': (-17.691,-0.288,-42.352)
N1: (-20.990,-1.723,-41.703)
N3: (-23.093,-0.681,-42.007)
N4: (-24.988,-1.667,-41.182)
C6: (-21.591,-2.751,-41.039)
C5: (-22.911,-2.779,-40.838)
O3': (-17.210,-0.076,-39.667)
OP1: (-15.871,0.717,-37.755)
OP2: (-18.372,0.196,-37.487)
C3': (-18.470,4.702,-39.750)
C1': (-20.071,4.036,-41.340)
C5': (-17.022,2.629,-40.067)
O4': (-18.973,3.151,-41.425)
C8: (-21.188,2.173,-39.973)
O2': (-19.169,6.250,-41.463)
C6: (-24.633,2.877,-40.108)
C5: (-23.237,2.720,-40.139)
C4: (-22.525,3.670,-40.843)
P: (-17.253,0.747,-38.296)
C4': (-17.841,3.714,-40.715)
C2': (-19.633,5.268,-40.548)
C2: (-24.338,4.772,-41.399)
N1: (-25.160,3.934,-40.761)
N3: (-23.015,4.731,-41.500)
N6: (-25.461,2.049,-39.474)
N7: (-22.379,1.774,-39.591)
N9: (-21.206,3.321,-40.727)
O5': (-17.613,2.193,-38.851)
O3': (-17.551,5.683,-39.321)
OP2: (-18.372,0.196,-37.487)
C3': (-18.470,4.702,-39.750)
C1': (-20.071,4.036,-41.340)
C5': (-17.022,2.629,-40.067)
O4': (-18.973,3.151,-41.425)
C8: (-21.188,2.173,-39.973)
O2': (-19.169,6.250,-41.463)
C6: (-24.633,2.877,-40.108)
C5: (-23.237,2.720,-40.139)
C4: (-22.525,3.670,-40.843)
P: (-17.253,0.747,-38.296)
C4': (-17.841,3.714,-40.715)
C2': (-19.633,5.268,-40.548)
C2: (-24.338,4.772,-41.399)
N1: (-25.160,3.934,-40.761)
N3: (-23.015,4.731,-41.500)
N6: (-25.461,2.049,-39.474)
N7: (-22.379,1.774,-39.591)
N9: (-21.206,3.321,-40.727)
O5': (-17.613,2.193,-38.851)
O3': (-17.551,5.683,-39.321)
Image (generated by PyMOL):