Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2018:A2017
Extra
PDB:
ATOM 1 O3' G A2017 -75.147 -79.645 -15.503 1.00 0.01 O
ATOM 2 P C A2018 -76.594 -79.020 -15.326 1.00 0.01 P
ATOM 3 OP1 C A2018 -76.443 -77.642 -14.867 1.00 0.01 O
ATOM 4 OP2 C A2018 -77.356 -79.941 -14.512 1.00 0.01 O
ATOM 5 O5' C A2018 -77.150 -79.031 -16.781 1.00 0.01 O
ATOM 6 C5' C A2018 -78.477 -78.628 -17.026 1.00 0.01 C
ATOM 7 C4' C A2018 -79.253 -79.683 -17.763 1.00 0.01 C
ATOM 8 O4' C A2018 -78.783 -80.986 -17.419 1.00 0.01 O
ATOM 9 C3' C A2018 -80.707 -79.765 -17.443 1.00 0.01 C
ATOM 10 O3' C A2018 -81.429 -78.745 -18.039 1.00 0.01 O
ATOM 11 C2' C A2018 -81.053 -81.121 -17.973 1.00 0.01 C
ATOM 12 O2' C A2018 -81.112 -81.080 -19.377 1.00 0.01 O
ATOM 13 C1' C A2018 -79.823 -81.901 -17.591 1.00 0.01 C
ATOM 14 N1 C A2018 -79.983 -82.665 -16.362 1.00 0.01 N
ATOM 15 C2 C A2018 -80.839 -83.762 -16.287 1.00 0.01 C
ATOM 16 O2 C A2018 -81.564 -84.072 -17.220 1.00 0.01 O
ATOM 17 N3 C A2018 -80.898 -84.503 -15.182 1.00 0.01 N
ATOM 18 C4 C A2018 -80.122 -84.195 -14.172 1.00 0.01 C
ATOM 19 N4 C A2018 -80.224 -84.933 -13.085 1.00 0.01 N
ATOM 20 C5 C A2018 -79.218 -83.113 -14.221 1.00 0.01 C
ATOM 21 C6 C A2018 -79.166 -82.392 -15.333 1.00 0.01 C
ATOM 22 P U A2019 -82.014 -77.584 -17.156 1.00 0.01 P
ATOM 23 OP1 U A2019 -82.087 -76.416 -18.023 1.00 0.01 O
ATOM 24 OP2 U A2019 -81.228 -77.509 -15.924 1.00 0.01 O
ATOM 25 O5' U A2019 -83.459 -78.100 -16.835 1.00 0.01 O
TER
ATOM 1 O3' C B2016 -71.892 -82.755 -12.009 1.00 0.01 O
ATOM 2 P G B2017 -73.231 -81.973 -12.298 1.00 0.01 P
ATOM 3 OP1 G B2017 -72.935 -80.550 -12.133 1.00 0.01 O
ATOM 4 OP2 G B2017 -74.303 -82.594 -11.496 1.00 0.01 O
ATOM 5 O5' G B2017 -73.466 -82.292 -13.812 1.00 0.01 O
ATOM 6 C5' G B2017 -72.741 -81.619 -14.820 1.00 0.01 C
ATOM 7 C4' G B2017 -73.592 -81.415 -16.025 1.00 0.01 C
ATOM 8 O4' G B2017 -73.717 -82.660 -16.740 1.00 0.01 O
ATOM 9 C3' G B2017 -75.010 -81.019 -15.732 1.00 0.01 C
ATOM 10 O3' G B2017 -75.147 -79.645 -15.503 1.00 0.01 O
ATOM 11 C2' G B2017 -75.714 -81.487 -16.960 1.00 0.01 C
ATOM 12 O2' G B2017 -75.379 -80.639 -18.028 1.00 0.01 O
ATOM 13 C1' G B2017 -75.030 -82.819 -17.190 1.00 0.01 C
ATOM 14 N9 G B2017 -75.652 -83.907 -16.410 1.00 0.01 N
ATOM 15 C8 G B2017 -75.153 -84.356 -15.229 1.00 0.01 C
ATOM 16 N7 G B2017 -75.841 -85.315 -14.708 1.00 0.01 N
ATOM 17 C5 G B2017 -76.882 -85.545 -15.577 1.00 0.01 C
ATOM 18 C6 G B2017 -77.951 -86.480 -15.516 1.00 0.01 C
ATOM 19 O6 G B2017 -78.236 -87.324 -14.679 1.00 0.01 O
ATOM 20 N1 G B2017 -78.758 -86.393 -16.604 1.00 0.01 N
ATOM 21 C2 G B2017 -78.573 -85.520 -17.629 1.00 0.01 C
ATOM 22 N2 G B2017 -79.472 -85.575 -18.628 1.00 0.01 N
ATOM 23 N3 G B2017 -77.589 -84.641 -17.690 1.00 0.01 N
ATOM 24 C4 G B2017 -76.768 -84.689 -16.640 1.00 0.01 C
ATOM 25 P C B2018 -76.594 -79.020 -15.326 1.00 0.01 P
ATOM 26 OP1 C B2018 -76.443 -77.642 -14.867 1.00 0.01 O
ATOM 27 OP2 C B2018 -77.356 -79.941 -14.512 1.00 0.01 O
ATOM 28 O5' C B2018 -77.150 -79.031 -16.781 1.00 0.01 O
TER
ATOM 2 P C A2018 -76.594 -79.020 -15.326 1.00 0.01 P
ATOM 3 OP1 C A2018 -76.443 -77.642 -14.867 1.00 0.01 O
ATOM 4 OP2 C A2018 -77.356 -79.941 -14.512 1.00 0.01 O
ATOM 5 O5' C A2018 -77.150 -79.031 -16.781 1.00 0.01 O
ATOM 6 C5' C A2018 -78.477 -78.628 -17.026 1.00 0.01 C
ATOM 7 C4' C A2018 -79.253 -79.683 -17.763 1.00 0.01 C
ATOM 8 O4' C A2018 -78.783 -80.986 -17.419 1.00 0.01 O
ATOM 9 C3' C A2018 -80.707 -79.765 -17.443 1.00 0.01 C
ATOM 10 O3' C A2018 -81.429 -78.745 -18.039 1.00 0.01 O
ATOM 11 C2' C A2018 -81.053 -81.121 -17.973 1.00 0.01 C
ATOM 12 O2' C A2018 -81.112 -81.080 -19.377 1.00 0.01 O
ATOM 13 C1' C A2018 -79.823 -81.901 -17.591 1.00 0.01 C
ATOM 14 N1 C A2018 -79.983 -82.665 -16.362 1.00 0.01 N
ATOM 15 C2 C A2018 -80.839 -83.762 -16.287 1.00 0.01 C
ATOM 16 O2 C A2018 -81.564 -84.072 -17.220 1.00 0.01 O
ATOM 17 N3 C A2018 -80.898 -84.503 -15.182 1.00 0.01 N
ATOM 18 C4 C A2018 -80.122 -84.195 -14.172 1.00 0.01 C
ATOM 19 N4 C A2018 -80.224 -84.933 -13.085 1.00 0.01 N
ATOM 20 C5 C A2018 -79.218 -83.113 -14.221 1.00 0.01 C
ATOM 21 C6 C A2018 -79.166 -82.392 -15.333 1.00 0.01 C
ATOM 22 P U A2019 -82.014 -77.584 -17.156 1.00 0.01 P
ATOM 23 OP1 U A2019 -82.087 -76.416 -18.023 1.00 0.01 O
ATOM 24 OP2 U A2019 -81.228 -77.509 -15.924 1.00 0.01 O
ATOM 25 O5' U A2019 -83.459 -78.100 -16.835 1.00 0.01 O
TER
ATOM 1 O3' C B2016 -71.892 -82.755 -12.009 1.00 0.01 O
ATOM 2 P G B2017 -73.231 -81.973 -12.298 1.00 0.01 P
ATOM 3 OP1 G B2017 -72.935 -80.550 -12.133 1.00 0.01 O
ATOM 4 OP2 G B2017 -74.303 -82.594 -11.496 1.00 0.01 O
ATOM 5 O5' G B2017 -73.466 -82.292 -13.812 1.00 0.01 O
ATOM 6 C5' G B2017 -72.741 -81.619 -14.820 1.00 0.01 C
ATOM 7 C4' G B2017 -73.592 -81.415 -16.025 1.00 0.01 C
ATOM 8 O4' G B2017 -73.717 -82.660 -16.740 1.00 0.01 O
ATOM 9 C3' G B2017 -75.010 -81.019 -15.732 1.00 0.01 C
ATOM 10 O3' G B2017 -75.147 -79.645 -15.503 1.00 0.01 O
ATOM 11 C2' G B2017 -75.714 -81.487 -16.960 1.00 0.01 C
ATOM 12 O2' G B2017 -75.379 -80.639 -18.028 1.00 0.01 O
ATOM 13 C1' G B2017 -75.030 -82.819 -17.190 1.00 0.01 C
ATOM 14 N9 G B2017 -75.652 -83.907 -16.410 1.00 0.01 N
ATOM 15 C8 G B2017 -75.153 -84.356 -15.229 1.00 0.01 C
ATOM 16 N7 G B2017 -75.841 -85.315 -14.708 1.00 0.01 N
ATOM 17 C5 G B2017 -76.882 -85.545 -15.577 1.00 0.01 C
ATOM 18 C6 G B2017 -77.951 -86.480 -15.516 1.00 0.01 C
ATOM 19 O6 G B2017 -78.236 -87.324 -14.679 1.00 0.01 O
ATOM 20 N1 G B2017 -78.758 -86.393 -16.604 1.00 0.01 N
ATOM 21 C2 G B2017 -78.573 -85.520 -17.629 1.00 0.01 C
ATOM 22 N2 G B2017 -79.472 -85.575 -18.628 1.00 0.01 N
ATOM 23 N3 G B2017 -77.589 -84.641 -17.690 1.00 0.01 N
ATOM 24 C4 G B2017 -76.768 -84.689 -16.640 1.00 0.01 C
ATOM 25 P C B2018 -76.594 -79.020 -15.326 1.00 0.01 P
ATOM 26 OP1 C B2018 -76.443 -77.642 -14.867 1.00 0.01 O
ATOM 27 OP2 C B2018 -77.356 -79.941 -14.512 1.00 0.01 O
ATOM 28 O5' C B2018 -77.150 -79.031 -16.781 1.00 0.01 O
TER
Atoms:
C2: (-80.839,-83.762,-16.287)
OP1: (-76.443,-77.642,-14.867)
OP2: (-77.356,-79.941,-14.512)
C4: (-80.122,-84.195,-14.172)
O5': (-77.150,-79.031,-16.781)
C3': (-80.707,-79.765,-17.443)
C1': (-79.823,-81.901,-17.591)
O4': (-78.783,-80.986,-17.419)
C5': (-78.477,-78.628,-17.026)
P: (-76.594,-79.020,-15.326)
O2: (-81.564,-84.072,-17.220)
C4': (-79.253,-79.683,-17.763)
C2': (-81.053,-81.121,-17.973)
O2': (-81.112,-81.080,-19.377)
N1: (-79.983,-82.665,-16.362)
N3: (-80.898,-84.503,-15.182)
N4: (-80.224,-84.933,-13.085)
C6: (-79.166,-82.392,-15.333)
C5: (-79.218,-83.113,-14.221)
O3': (-81.429,-78.745,-18.039)
OP1: (-76.443,-77.642,-14.867)
OP2: (-77.356,-79.941,-14.512)
C4: (-80.122,-84.195,-14.172)
O5': (-77.150,-79.031,-16.781)
C3': (-80.707,-79.765,-17.443)
C1': (-79.823,-81.901,-17.591)
O4': (-78.783,-80.986,-17.419)
C5': (-78.477,-78.628,-17.026)
P: (-76.594,-79.020,-15.326)
O2: (-81.564,-84.072,-17.220)
C4': (-79.253,-79.683,-17.763)
C2': (-81.053,-81.121,-17.973)
O2': (-81.112,-81.080,-19.377)
N1: (-79.983,-82.665,-16.362)
N3: (-80.898,-84.503,-15.182)
N4: (-80.224,-84.933,-13.085)
C6: (-79.166,-82.392,-15.333)
C5: (-79.218,-83.113,-14.221)
O3': (-81.429,-78.745,-18.039)
OP1: (-72.935,-80.550,-12.133)
OP2: (-74.303,-82.594,-11.496)
C3': (-75.010,-81.019,-15.732)
C1': (-75.030,-82.819,-17.190)
C5': (-72.741,-81.619,-14.820)
O6: (-78.236,-87.324,-14.679)
O4': (-73.717,-82.660,-16.740)
C8: (-75.153,-84.356,-15.229)
C2: (-78.573,-85.520,-17.629)
C6: (-77.951,-86.480,-15.516)
C5: (-76.882,-85.545,-15.577)
C4: (-76.768,-84.689,-16.640)
P: (-73.231,-81.973,-12.298)
C4': (-73.592,-81.415,-16.025)
C2': (-75.714,-81.487,-16.960)
O2': (-75.379,-80.639,-18.028)
N1: (-78.758,-86.393,-16.604)
N2: (-79.472,-85.575,-18.628)
N3: (-77.589,-84.641,-17.690)
N7: (-75.841,-85.315,-14.708)
N9: (-75.652,-83.907,-16.410)
O5': (-73.466,-82.292,-13.812)
O3': (-75.147,-79.645,-15.503)
OP2: (-74.303,-82.594,-11.496)
C3': (-75.010,-81.019,-15.732)
C1': (-75.030,-82.819,-17.190)
C5': (-72.741,-81.619,-14.820)
O6: (-78.236,-87.324,-14.679)
O4': (-73.717,-82.660,-16.740)
C8: (-75.153,-84.356,-15.229)
C2: (-78.573,-85.520,-17.629)
C6: (-77.951,-86.480,-15.516)
C5: (-76.882,-85.545,-15.577)
C4: (-76.768,-84.689,-16.640)
P: (-73.231,-81.973,-12.298)
C4': (-73.592,-81.415,-16.025)
C2': (-75.714,-81.487,-16.960)
O2': (-75.379,-80.639,-18.028)
N1: (-78.758,-86.393,-16.604)
N2: (-79.472,-85.575,-18.628)
N3: (-77.589,-84.641,-17.690)
N7: (-75.841,-85.315,-14.708)
N9: (-75.652,-83.907,-16.410)
O5': (-73.466,-82.292,-13.812)
O3': (-75.147,-79.645,-15.503)
Image (generated by PyMOL):